These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10372#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4110 fasta sequence [GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAGTCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCTTCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACCCAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGATTCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATAGAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGGAGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATTTCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGTAATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACACAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAGATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCTCATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTTAATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCAGAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTTCGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAGTCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCTGAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGATGACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCACCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTTTATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGATAAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACTGCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGATGCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGGGTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCTCATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGGGCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGACATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAAGGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAGGAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTACAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAAAGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA-GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCAACCCTTTGTGTCCATCCAGATAAATTACAGCAAAGGGGTGCTACAATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACAAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCAATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK107480 [GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAGTCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCTTCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACCCAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGATTCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATAGAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGGAGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATTTCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGTAATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACACAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAGATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCTCATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTTAATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCAGAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTTCGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAGTCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCTGAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGATGACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCACCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTTTATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGATAAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACTGCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGATGCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGGGTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCTCATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGGGCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGACATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAAGGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAGGAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTACAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGAC ] [+] EMBL AK063417 [ TCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTGATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACTGCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAAAGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGGAATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATTGAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAGTGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGATTCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAAGAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAATGACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTCTTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGAAGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTTACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCTTCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATTTCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAAGCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCATGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTACCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCTGGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGACAAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAAAGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCAACCCTTTGTGTCCATCCAGATAAATTACAGCAAAGGGGTGCTACAATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACAAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCAATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTT ] [+] EMBL CF323618 [ AAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAACGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTTGCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAACGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAGAGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGAGAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTT AAGGAGGGGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTC ] [-] EMBL AU174978 [ TTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCTGCTGTGAAGAAAGCCTACAGGAAGGCA ] [+] EMBL AU174979 [ AGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGAGAACGGTACAGATCCTCTTTCAAGGA GAGTTTTAAGTCCAGCAATCTGGATAATCGACAGGACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGCAAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGCACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAAAGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGGTCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGAGCTGACAGTGGTTGGCAGCCAGTGCCACTTACAGAGCTAATTACAGCTGCT ] [+] EMBL CF328298 [ GTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10372#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGCTGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANAATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGTCGAAAAAAAAAA] [+] EMBL BQ907756 [GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGCTGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANAATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTTGATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTGAAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTAGTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGATGACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGTCGAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10372#0 GGGGCGGAGGAGATCGCCTCGTCGACTGGGAGCTCCTCCAGGTCATCGATGATAAAAGAG 60 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCTAGCCAACCAGATGCGCAGTCATTTATGCTTCCTCAACATTTCAAGGAGCATGAGTCT 120 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCTGTAATTTCCTTCCCTCCAGACAATCAGCAGTTTGTCATGTCATATAACAAGACTACC 180 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CAGAGATCTGACGATCTAGTTGAGATGACTACTGATCCTTCAATGGATTATGTGGTTGAT 240 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCTTGCGAATTTCCTCACGTGCCAACAACTAATCATGTTGCAACAATGGATAGTGGTATA 300 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAAGCTAATGGAGAAAAAAGGAAGAAGTCCACCACAACCTCTGCAAGTGTCAGTCTAAGG 360 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGCTCTGAGAGTGATTTCACAGTTGATCAGAAGCAGCACATTCCAGCATATCCACCTATT 420 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCTGAAAAAGTTTCTGCAAATGAGAATCACAAGAACTCCAATAGTATTTCAACATCCAGT 480 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AATGGAACACCTTCTCCTGATTATGCCTTTCTAAGGGTTTCTGATGTCAACGTGCAAACA 540 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CAAACAGTAAAACCACCACCTCCTCTGAAGCAGACATCTAAATTGCTTAAGAGGAGAGAG 600 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 ATTTTAGCAAAAGGAGATGTCCATCTTGAAAATCACAGCTGCCCTCCAGCCTCTTCTGCT 660 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CATGCCCCTTCAAACACCAGCACATCTCAGGCTGAAAGAAGAGACGATACTGCTTTGTTT 720 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AATAATGAGGCCAATCCCAGTTCTGCTGCAGCTGCTATGAAGGAAGCAATGGAATATGCA 780 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAAGCTAGGTTAAGAGCTGCGAAAGAACTGATGGAGAGAAAAGGGGACAGTTTTAAACTT 840 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CGTAAGAAACCAAGCCATCATAGAAGCACAAGATCTACAGAAATAAAGGTTCCTACAGAG 900 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCAGACACATTCGATGAGAACCTCTCCGTGAAGAAGTCAACAAAGGAGGAAATGAACTCT 960 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAGGATTCGTTGCTGGACAAGCACCAGAAGGCTAGTGCAGTTAGAACAGATCATTGTGAT 1020 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GACAGTGGAAAAAGGGCATTGTCGCTGGAGAAACCTCAGCATATGCAAAGCTGCACTGCA 1080 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CCCAATCAAACTTCCAGTAAACTAGGTAAGTTAGGCAACTGGACATCAGGTGATGAATTT 1140 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TATGAGCTGACTGGAGAAGATCAGAAACAGAAAACAGATGCAGCTGTAGGGGAGGAAGAT 1200 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AAGTGTGAGGTAACAAATCCTGTCACCAAGCTCAGCAAGGAACAAAAATGCGAAGTTACT 1260 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCAGCGGACTCTGATTTGGAAAGGTATGAAAAGCTGTGGGAGGTTAATGATGGCAGGGAT 1320 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCAGGAGTGAAACATGTCAATCCGAGAGAAGATAATACATCTCCAATGGGGAAAGATAGG 1380 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GTGTCTATGATTCTGGAAGCTTCTACAGAAAATATAGACCATGAAAAAATTTATAACTCT 1440 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CATTTTGAGGGTCCTAAAGTTGTGGAAACTTCTAATGAAAGCCATGATGGTGAGGATGGG 1500 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCTGTTGAGATTCCTTGTAAGAGTGGAATCACTATTTCAGAACCAAACTTGATGAAGGAC 1560 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 ATGCACGGTTCATTCATGGAGGCTTCTTCACCTGGAGAGTATGTGGCCGATTTTGGTAAA 1620 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GGCACTACAGAGGAAAGTCCAGTAGCAGGAATATCGCTGGAGCCTAAAACCACTAAAGAG 1680 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAACTTGAGGCAGCATGTGATGCTGAGATGCAATGCACCACAGGGGATAGTGAAAAATTA 1740 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CAAGAATCTTCAGAAGTCACCAGCATTGATAACTCACTGGCAAGACAAATTAAATCATTG 1800 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 ATTCTAGAAGATCTCGAGGGATCTTCTGAAACTCAAGCTTTCCCAGGGGACCCCGGTACT 1860 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCTGGGTCAGAAGCTGAAACTTATGGGAGGAACCTTGGTACAACTGGGTTGGAAACTGAA 1920 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGTTATGGGAGGGAAAAGTTCAGTTTTGTTGAAGAATCATTCATGCATAATGCAAACAGG 1980 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AATGTAACTGAATCACCCGTAGAAACTCCAATCCCTGAACAAGTAGAGAATGTTGAGATT 2040 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAAGATAGAGTTGGTTCATGTGCACATTCTGAAGAATCAACCGTGGATAAAGATTCCGAG 2100 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TGTCCTGAAGAGGGAAGTGATATTACTTCACAAAACAACAATCTGCCAGATCATGAAGAT 2160 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCAACTATGCTAAATGTATTTGAGGTGGCCAGCAAATTGATTAAAAGAGACCTAGATCAA 2220 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAAAAGCAAGATACACTACAGCCTGGTGAAGTAGAAACTAGAACTGTCTTGGATAGTAAT 2280 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GACAAAGATACAAAAGAAAACCCTTCAGAAAATAGTAACACGATAGGTAGTGAAGAAGTC 2340 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TTGAGTCACGGTAACCAGGAGGACCAGAAGGTGCCTGAAATGGATAAAACCAAAGGACGA 2400 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGTGATGCAAATGCACAAGTTAAATTAAGTGGTGTAAACTTTTATGAAGATGGAGATGTT 2460 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 ACAAGTGCTGCTAATAATGTTACAACTAGATTGACTACAAATTCAAAAGGCCAGGCGTCT 2520 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCCTCTTCAGAAATGCTAACTGGCAGACAGCACTTGCCTCAAGATGCTGGACCTGCTATT 2580 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCTCAGACATCTAACGGAACTTTCCCTAGTCTTGAAAAGACCGAAGAAGTTTGCAAAGAA 2640 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCTGGGAGAGAATTACCAACAGATAAATCTGCTGCATTTGAAGATGAGAATAGCAGGGCA 2700 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TGCAAATCAAAGGCAGAGCTAAAGCAGCAACAATTTCATTCTGAGAAGAGTAGCAGTTTA 2760 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CCTAAATCTGCAGAAGGTCATATCCCATCTTCTGCTGATATATCAAGAAAAGAAACACCT 2820 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GGGGTTCAGAGACTCAAAGAGCAGGGAAGTCTAAGAACAGAAAGGGAAAGAGAGAAGGAC 2880 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AAAGAGGCTTCTCGGAGACTGGAAGAAACAAAAGAAAGGGATAAAAAATTTGAGAAGGAA 2940 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGGGAAATTGCTGAAGAGAGGGAAAGAAAAAAACTAGAAGAACAGGAAAGGGAGAGGGAA 3000 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CGGGAAAAGGATAGACTTGCTGTTGAAAGAGCTACAAGAGAAGCACATGAGAGAGCATTT 3060 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCTGAGGCTCGTGAAAGGGCAGAAAAAATAGCATTGGAAAGGGTTACTGCAGCACGGCAA 3120 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 CGGGCTTCTGCTGAGGCCCGAGAAAAAGAAGAGAGAGCGAGTACTGAAGCAGCTGCTGAG 3180 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGGGCTGCTAGGATAAAAGCAGAACGTGCAGCGGTTGAACGAGCAACTGCAGAAGCTCGA 3240 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAGAGGGCAATTGAAAAGGCTAAGGCTGAAAAGGCTGCCGCAGAGGCAAGAGAACGGAGA 3300 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GAACGGTACAGATCCTCTTTCAAGGAGAGTTTTAAGTCCAGCAATCTGGATAATCGACAG 3360 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GACACACAGTTTCAGAGAGCGGTTTCCAGTAACTTAATGAGAAACCCAGATTCATATAGC 3420 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AAAGGGCTTGAGGTTGAATCAGCTTTAAGGCATAAAGCAAGATTAGAGAGGCATCAACGC 3480 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 ACAGCTGAGCGTGTGACAAAAGCACTAGCTGAGAAGAACATGCGTGACCTGCTGGCGCAA 3540 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 AGAGAGCAAGCAGAGAAACATAGGTTGTCTGAGTACCTAGATCCTGAGATCAAGAGATGG 3600 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 TCAAACGGAAAGGAAGGAAATCTGCGAGCCTTGTTATCCACATTGCAATATATTCTTGGA 3660 consensus_10372#1 ------------------------------------------------------------ consensus_10372#0 GCTGACA--GTGGTTGGCA-GCCAGTG---CCAC-TTACA-GAGCTAATTACA--GCTGC 3710 consensus_10372#1 GCTGACCACGTGGTTGGCACGCCCACGTGGCCACCTTACACGAGCTAATTACCACGCTGC 60 ****** ********** *** * **** ***** *********** ***** consensus_10372#0 TGCTGTGAAGAAAGCCT----ACAGGAAGGCAACCC-TTTGTGTCCA--TCCA-GATAAA 3762 consensus_10372#1 TGCTGTGAAGAAAGCCCTACCACGGAAGGCCAACCCCTTTGTGTCCCACTCCACGATANA 120 **************** ** * * * ****** ********* **** **** * consensus_10372#0 -TTACA----GCAAAGGGGTGCTACA-ATCAGACAGAAATACATATGCGAGAAGGTTTTT 3816 consensus_10372#1 ATTACACGCCACAAGGGGGTGCTACACATCAGACAGAAATACATATGCGAGAAGGTTTTT 180 ***** *** *********** ********************************* consensus_10372#0 GATCTTCTTAAGGATGCTTGGAACA-AGTTCACTTCGGAGGAGCGCTAGGATGGATGCTG 3875 consensus_10372#1 GATCTTCTTAAGGATGCTTGGAACACAGTTCACTTCGGAGGAGCGCTAGGATGGATGCTG 240 ************************* ********************************** consensus_10372#0 AAACAGCCGATTTATTTTCGAGACAGGAAATTCGTTAGTAATTATATAGCCATATTGTTA 3935 consensus_10372#1 AAACCGCCGATTTATTTTCGAGACCGGAAATTCGTTAGTAATTATATAGCCATATTGTTA 300 **** ******************* *********************************** consensus_10372#0 GTTTGTTAATTC-AATATTGGTGTAAATATGCAGTTCTAGATATCTTGCTAGATGATGAT 3994 consensus_10372#1 GTTTGTTAATTCCAATATTGGTGTAAATATCCCGTTCTAGATATCTTGCTAGATGATGAT 360 ************ ***************** * *************************** consensus_10372#0 GACGCTCGTCGCTCCTTGAATCGATTCAATAGAAGAGCTTCATTGCTCCTAAAAAAAAAA 4054 consensus_10372#1 GACGCTCGTCGCTCCTTGAATCGATTCCATAGAAGAGCTTCATTGCTCCTAGTCTCTTGT 420 *************************** *********************** consensus_10372#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4110 consensus_10372#1 CGAAAAAAAAAA-------------------------------------------- 432 ********** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||