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Oryza sativa
cluster # 10377 cluster # 10377       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10377#0 length = 1456 sequences # 4  
consensus_10377#1 length = 1082 sequences # 1  
consensus_10377#2 length = 385 sequences # 1  
consensus_10377#3 length = 316 sequences # 1  

consensusID : consensus_10377#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1456
fasta sequence
                              [TTCTCTCGCCGCCGAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCACACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGTAAATTCATGTACAAGCATTTGAATGCATTTTAGAGAGAAAAAAAAAAGGAGGAAGAGAGAGCTGTTCAGTCTGGGCCTTTGATGGAATGATCGTTTCGTCTGCACCACGACTGCTTTGCTTTGCTTTGCTTTATTTACGTTGCACTCGGGGACATCTCACTGTCGCCACCAGCTTTGCTTTGCTCCCTTGCCTCCATTTGTCACCGTGTGGTGATGGAAAATCACAGATTAGATAATGCAACAGCTCGCTTTTTCGCACACGTCGTAGTCCATCCCGCCCCAGCCGTGTAGCCAGATCGGTGCGAAAAGACGCGGCCGATAGCTGCTGGTACGCACGAATCACCC]

[+] EMBL AK061520             [TTCTCTCGCCGCCGAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCACACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGTAA                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK104665             [                                                                                         TCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATA                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF323683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATTCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGTAAATTCATGTACAAGCATTTGAATGCATTTTAGAGAGAAAAAAAAAAGGAGGAAGAGAGAGCTGTTCAGTCTGGGCCTTTGATGGAATGATCGTTTCGTCTGCACCACGACTGCTTTGCTTTGCTTTGCTTTATTTACGTTGCACTCGGGGACATCTCACTGTCGCCACCAGCTTTGCTTTGCTCCCTTGCCTCCATTTGTCACCGTGTGGTGATGGAAAATCACAGATTAGATAATGCAACAGCTCGCTTTTTCGCACACGTCGTAGTCCATCCCGCCCCAGCCGTGTAGCCAGATCGGTGCGAAAAGACGCGGCCGATAGCTGCTGGTACGCACGAATCACCC]
[+] EMBL AU165406             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       gnAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGTAAATTCATGTAAAAa                                                                                                                                                                                                                                                                                                                                          ]


>consensus_10377#0 TTCTCTCGCCGCCGAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCA CACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCG CGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAG ATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATC GACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTC GACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGAC AAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCG CCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAG CCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAG CCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCG CCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCC TGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCAC GGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCT CCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTAC AGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCAT CGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACC GTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTAT ACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAG TATATATCGTCATTAATAAACAGTCCCAAGTAAATTCATGTACAAGCATTTGAATGCATT TTAGAGAGAAAAAAAAAAGGAGGAAGAGAGAGCTGTTCAGTCTGGGCCTTTGATGGAATG ATCGTTTCGTCTGCACCACGACTGCTTTGCTTTGCTTTGCTTTATTTACGTTGCACTCGG GGACATCTCACTGTCGCCACCAGCTTTGCTTTGCTCCCTTGCCTCCATTTGTCACCGTGT GGTGATGGAAAATCACAGATTAGATAATGCAACAGCTCGCTTTTTCGCACACGTCGTAGT CCATCCCGCCCCAGCCGTGTAGCCAGATCGGTGCGAAAAGACGCGGCCGATAGCTGCTGG TACGCACGAATCACCC



consensusID : consensus_10377#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1082
fasta sequence
                              [CCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGT]

[+] EMBL AK105937             [CCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAAGT]


>consensus_10377#1 CCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTC CTCGCATTGCAGGCGGCTGCCGACTGAATCAAGATGAAGCGGACCATCATCGTCAAAGTG GACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGATCAGAGAC AAGGGTGAGTTCGTCATCGACGACATCGAGTTCGACGTGAAGCACAACAAGGTGATCGTG TCGGGGCCCTTCGACCCGGACAAGCTCGCAGACAAGCTCTGCTGCAAGGCGTGCAAGATC ATCAAGGAGATCGAGATCGTCGACCTCCCGCCGCCGCCTCCGCCGCCGGCGCCGGAGCCG GAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAGCCACCGCCTCCTAAGGAGGAGGAGAAG CCCGAGCCGCCGCCGGCGGTGATTATCGTGGAGCCACCGGCGCCGGCGCCCGAGCCGGAG CCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCGCCGCCTCCCAAGCAGGAGCCATGCCCG CCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCCTGGCCCTACCCCTACCCGTTCCCGTCG TGGCCGTCCGACTGCTGCTGCCACCATGGCCACGGCGGCTGCCACTGCTGCTCCTGCGGG AAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTAC CCGCCGCAGCAGCCCTACCCTTGCGGCGCCTCCGCCGCCGCAGTACATCCCCTGCTACCC GCCGCAGCAGCCCTACCCTTGCGGCGGCTACAGGATCGTCTGCGAGGAGGACCCCTCCTA CGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCG ATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACAT CCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTT ACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAACAGTCCCAA GT



consensusID : consensus_10377#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 385
fasta sequence
                              [GAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCACACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGGTGAGTGGTGTGTGTTGTGTGCCTTCCTCTCTGTAACTCTGTTCATCAGTCGGAGTTAAAAGACTTAATGAGTTTATGTGGTAGGATTGGGTATTAATTTTGATGGTGCTAGCTGGCGTTCTTGATGATTGCAGGAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGAT]

[+] EMBL AU165405             [GAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCACACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGGTGAGTGGTGTGTGTTGTGTGCCTTCCTCTCTGTAACTCTGTTCATCAGTCGGAGTTAAAAGACTTAATGAGTTTATGTGGTAGGATTGGGTATTAATTTTGATGGTGCTAGCTGGCGTTCTTGATGATTGCAGGAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGAT]


>consensus_10377#2 GAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCACACCGCATCGTCA TCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCGCGCGCTTGTTCGC AGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAGGTGAGTGGTGTGT GTTGTGTGCCTTCCTCTCTGTAACTCTGTTCATCAGTCGGAGTTAAAAGACTTAATGAGT TTATGTGGTAGGATTGGGTATTAATTTTGATGGTGCTAGCTGGCGTTCTTGATGATTGCA GGAAGATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCA AGATCGACAGGGTGCTCACCAGGAT



consensusID : consensus_10377#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 316
fasta sequence
                              [CGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF310931             [CGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCTTAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10377#3 CGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATGATCATCGTTATCTTCTCCT TAATTACCTTCTCCGATCTCTCCTCCTGTATAATTAAGCACGCACCGTACAGACACGCAC ATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCTTATACACTCCCTCTGTA ACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGTAAGTATATATCGTCATT AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      TTCTCTCGCCGCCGAGAGACACGAAAAAGATGGTGGGTGTATAGCTACATATTCACGCCA 60
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      ---------------------------CCTCCCGCGGCATCACCACTCACTCCACCGCCG 33
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACCACTCACTCCACCGCCG 120
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAG 93
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGCTGCCGACTGAATCAAG 180
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      ATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATC 153
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      ATGAAGCGGACCATCATCGTCAAAGTGGACTTGGAATGCGAGCGCTGCTATGCCAAGATC 240
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      GACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTC 213
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      GACAGGGTGCTCACCAGGATCAGAGACAAGGGTGAGTTCGTCATCGACGACATCGAGTTC 300
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      GACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGAC 273
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      GACGTGAAGCACAACAAGGTGATCGTGTCGGGGCCCTTCGACCCGGACAAGCTCGCAGAC 360
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      AAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCG 333
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      AAGCTCTGCTGCAAGGCGTGCAAGATCATCAAGGAGATCGAGATCGTCGACCTCCCGCCG 420
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAG 393
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CCGCCTCCGCCGCCGGCGCCGGAGCCGGAGCCGGAGCCACCCAAGAAAGAAGAGCCCCAG 480
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAG 453
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CCACCGCCTCCTAAGGAGGAGGAGAAGCCCGAGCCGCCGCCGGCGGTGATTATCGTGGAG 540
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCG 513
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CCACCGGCGCCGGCGCCCGAGCCGGAGCCCGAGCCGCCGAAGAAAGAGCCGCCGCCGCCG 600
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCC 573
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CCGCCTCCCAAGCAGGAGCCATGCCCGCCGCCGCCCAAGGTCGTCGAGGTCCCTTACCCC 660
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      TGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCAC 633
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      TGGCCCTACCCCTACCCGTTCCCGTCGTGGCCGTCCGACTGCTGCTGCCACCATGGCCAC 720
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      GGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCT 693
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      GGCGGCTGCCACTGCTGCTCCTGCGGGAAGGCGCCGGAGCCGGCGCCGGCGCCGGCGCCT 780
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      CCGCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGCCTCC 753
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CCGCCGCCGCAGTACATCCCCTGCTACCCGCC---------------------------- 812
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      GCCGCCGCAGTACATCCCCTGCTACCCGCCGCAGCAGCCCTACCCTTGCGGCGGCTACAG 813
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      ------------------------------GCAGCAGCCCTACCCTTGCGGCGGCTACAG 842
consensus_10377#2      -----------------------------GAGAGACACGAAAAAGATGGTGGGTGTATAG 31
                                                                                   

consensus_10377#1      GATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATG-ATCATC 872
consensus_10377#3      ------------CGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATG-ATCATC 47
consensus_10377#0      GATCGTCTGCGAGGAGGACCCCTCCTACGCCTGCGCCATCATGTGACCTAATG-ATCATC 901
consensus_10377#2      CTACATATTCACGCCACACCGCATCGTCATCTACACATCTCCACCTCCCGCGGCATCACC 91
                                        *** *  *  *  ** * *          **    * **** *

consensus_10377#1      GTTATCTTCTCCTTAATTACCTTCTCCG-ATCTCTCCTCCTGTATAATTAAGCACGCACC 931
consensus_10377#3      GTTATCTTCTCCTTAATTACCTTCTCCG-ATCTCTCCTCCTGTATAATTAAGCACGCACC 106
consensus_10377#0      GTTATCTTCTCCTTAATTACCTTCTCCG-ATCTCTCCTCCTGTATAATTAAGCACGCACC 960
consensus_10377#2      ACTCACTCCACCGCCGCGCGCTTGTTCGCAGCTCTTCCTCCTCCTCGCATTGCAGGCGGC 151
                         *  ** * **        *** * ** * **** *  *    *      *** **  *

consensus_10377#1      GTACAGAC---ACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCT 988
consensus_10377#3      GTACAGAC---ACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCT 163
consensus_10377#0      GTACAGAC---ACGCACATATATACTACACATCCTACACGTACTCCTCTTTATCTACTCT 1017
consensus_10377#2      -TGCCGACTGAATCAAGGTGAGTGGTGTGTGTTGTGTGCCTTCCTCTCTGTAACTCTGTT 210
                        * * ***   *   *  *   *  *     *  *   * * *  **** ** **    *

consensus_10377#1      TATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGT 1048
consensus_10377#3      TATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGT 223
consensus_10377#0      TATACACTCCCTCTGTAACTGTTGATTTCCTTACGTCCCATTTAGAGGTGAAAAATAAGT 1077
consensus_10377#2      CATCAGTCGGAGTTAAAAGACTTAATGAGTTTATGTGGTAGGATTGGGTATTAATTTTGA 270
                        **          *  **   ** **    *** **   *      ***   ** *  * 

consensus_10377#1      AAGTATATATCGTCATTAATAAACAGTCCCAAGT-------------------------- 1082
consensus_10377#3      AAGTATATATCGTCATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 283
consensus_10377#0      AAGTATATATCGTCATTAATAAACAGTCCCAAGTAAATTCATGTACAAGCATTTGAATGC 1137
consensus_10377#2      TGGTGCTAGCTGGCGTTCTTGATGATTGCAGGAAGATGAAGCGGACCATCATCGTCAAAG 330
                         **       * * **  * *  *                                   

consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- 316
consensus_10377#0      ATTTTAGAGAGAAAAAAAAAAGGAGGAAGAGAGAGCTGTTCAGTCTGGGCCTTTGATGGA 1197
consensus_10377#2      TGGACTTGGAATGCGAGCGCTGCTATGCCAAGATCGACAGGGTGCTCACCAGGAT----- 385
                                                                                   

consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      ATGATCGTTTCGTCTGCACCACGACTGCTTTGCTTTGCTTTGCTTTATTTACGTTGCACT 1257
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      CGGGGACATCTCACTGTCGCCACCAGCTTTGCTTTGCTCCCTTGCCTCCATTTGTCACCG 1317
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      TGTGGTGATGGAAAATCACAGATTAGATAATGCAACAGCTCGCTTTTTCGCACACGTCGT 1377
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      ------------------------------------------------------------
consensus_10377#3      ------------------------------------------------------------
consensus_10377#0      AGTCCATCCCGCCCCAGCCGTGTAGCCAGATCGGTGCGAAAAGACGCGGCCGATAGCTGC 1437
consensus_10377#2      ------------------------------------------------------------
                                                                                   

consensus_10377#1      -------------------
consensus_10377#3      -------------------
consensus_10377#0      TGGTACGCACGAATCACCC 1456
consensus_10377#2      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)