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Oryza sativa
cluster # 10378 cluster # 10378       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10378#0 length = 2535 sequences # 6  
consensus_10378#1 length = 568 sequences # 1  

consensusID : consensus_10378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2535
fasta sequence
                              [ACACCCTTACTTCTGTCCCCTTCTCTGAGTCTGCTCTGCTCGTCCCCAAGAACACGATTCAGCGACGCGCGCGCAACAGTGCCGCCGCGGCCGCCGGCAGGTTTGACCCATCCAAAGCCAACCCCCAAACCGACGAATCAATCAAGAACCCCCCCGAATCTAAAATCTTTCTTTAAGAGCTCTCCCTCCCCTGGAGCGGCTTCTCCCGCAAGCCGCTGAATTTTTCCACCACCACCGGTCGTCGCGGATTCCCGCGACAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTTCTTTGTTTTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCTGTCCTTGATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATATGTGAGCGAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTCGACTCGATGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAGCAGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGCATCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGCGTGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACTTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGCAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTCTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCTATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCATTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCTCTGGTGGTTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTACGGAGCAGTCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCCATGGTTGCGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTTCTTCCGAAGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGAACGAATGCTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTGGTTCCAACTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTCCAGATATGGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTAAACGTCATAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAAGCAATAGGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGTTCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGATCGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTGAAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCTGAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGACAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCTACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAGGAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTT-GTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATGTTGGTTCTTTTAAAAA]

[+] EMBL AK100347             [ACACCCTTACTTCTGTCCCCTTCTCTGAGTCTGCTCTGCTCGTCCCCAAGAACACGATTCAGCGACGCGCGCGCAACAGTGCCGCCGCGGCCGCCGGCAGGTTTGACCCATCCAAAGCCAACCCCCAAACCGACGAATCAATCAAGAACCCCCCCGAATCTAAAATCTTTCTTTAAGAGCTCTCCCTCCCCTGGAGCGGCTTCTCCCGCAAGCCGCTGAATTTTTCCACCACCACCGGTCGTCGCGGATTCCCGCGACAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTTCTTTGTTTTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCTGTCCTTGATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATATGTGAGCGAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTCGACTCGATGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAGCAGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGCATCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGCGTGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACTTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGCAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTCTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCTATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCATTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCTCTGGTGGTTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTACGGAGCAGTCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCCATGGTTGCGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTTCTTCCGAAGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGAACGAATGCTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTGGTTCCAACTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTCCAGATATGGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTAAACGTCATAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAAGCAATAGGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGTTCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGATCGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTGAAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCTGAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGACAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCTACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAGGAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTT GTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATGTTGGTTCTTT      ]
[+] EMBL CB669862             [                                                                                                                                                                                                                                                         TCCCCCTTCAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTTCTTTGTTTTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCTGTCCTTGATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATATGTGAGCGAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTCGACTCGATGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAGCAGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGCATCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGCGTGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGATAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB669861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGACTGGGAGTACTTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGTTCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGATCGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTGAAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCTGAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGACAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCTACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAGGAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTT GTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATGTTGGTTCTT       ]
[-] EMBL CB645579             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGTTCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGATCGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTGAAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCTGAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGACAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCTACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAGGAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTT GTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATTGTACATTTATAGGGTAAATTCTGTACATACTCC                                          ]
[+] EMBL BI809181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGCGTCGAATCGATC GTACCTATCTTTGAGATAACGC ATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTT GTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCC AAACTGCAGGCATGAATGAATCATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATGTTGGTTCTTTTAAAAA]
[-] EMBL D42359               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGAAATCAGAGTCAGATAGGTCCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCCCCAAATCTAGGAGGTTTTATTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCAT                 ]


>consensus_10378#0 ACACCCTTACTTCTGTCCCCTTCTCTGAGTCTGCTCTGCTCGTCCCCAAGAACACGATTC AGCGACGCGCGCGCAACAGTGCCGCCGCGGCCGCCGGCAGGTTTGACCCATCCAAAGCCA ACCCCCAAACCGACGAATCAATCAAGAACCCCCCCGAATCTAAAATCTTTCTTTAAGAGC TCTCCCTCCCCTGGAGCGGCTTCTCCCGCAAGCCGCTGAATTTTTCCACCACCACCGGTC GTCGCGGATTCCCGCGACAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTTCTTTGTT TTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCTGTCCTTG ATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATATGTGAGC GAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTCGACTCGA TGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAGC AGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGCA TCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGCG TGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACTG AACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCC TCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCA CGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTGC ATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACT TTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGC AGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTC TCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCT ATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCAT TCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCTCTGGTGG TTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTACGGAGCAG TCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCCATGGTTG CGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTTCTTCCGA AGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGAACGAATG CTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTGGTTCCAA CTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTCCAGATAT GGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTAAACGTCA TAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAAGCAATAG GACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGTT CTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGATC GGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTGA AAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCTG AGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGAC AGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCTA CGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAGG AAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAAT TGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTCT TCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTCC CCAAATCTAGGAGGTTTTGTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACTC CAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCATT GTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATGT TGGTTCTTTTAAAAA



consensusID : consensus_10378#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 568
fasta sequence
                              [CCCCCCCTACAACGGGCGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGACCGGCCTGAAACTAACGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAAGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACTTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGCAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTCTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCTATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCATTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCT]

[+] EMBL CB645578             [CCCCCCCTACAACGGGCGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGACCGGCCTGAAACTAACGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAAGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACTTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGCAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTCTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCTATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCATTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCT]


>consensus_10378#1 CCCCCCCTACAACGGGCGGACCATTTACTCCCTCATCAAGACTGAACGCATCAACGACCG GCCTGAAACTAACGGTGCTCATCGCGCTGCCGGTGCTGTTCGGCCTCTGGCTGGGGCTGG GCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTCACGCCGTGGATCGCCA CCTTCGAGGCGTTCAGGCAAGAGAGCGAGTCCAAGAAGTTCGTGCATGGCGTCGTGGACG GGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGACTTTGCGGATTTATGCT TCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCGCAGAATTGCGAGCCCC ATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGTCTCTTGGGATTAATCG TTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCCTATATGCTCTTCAAAG GTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCATTCCTTGAGACAGTTT GTGTGCCGATCGCTGGCCTGGCTATCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10378#0      ACACCCTTACTTCTGTCCCCTTCTCTGAGTCTGCTCTGCTCGTCCCCAAGAACACGATTC 60
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      AGCGACGCGCGCGCAACAGTGCCGCCGCGGCCGCCGGCAGGTTTGACCCATCCAAAGCCA 120
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      ACCCCCAAACCGACGAATCAATCAAGAACCCCCCCGAATCTAAAATCTTTCTTTAAGAGC 180
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TCTCCCTCCCCTGGAGCGGCTTCTCCCGCAAGCCGCTGAATTTTTCCACCACCACCGGTC 240
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GTCGCGGATTCCCGCGACAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTTCTTTGTT 300
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCTGTCCTTG 360
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      ATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATATGTGAGC 420
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTCGACTCGA 480
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAGC 540
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      AGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGCA 600
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGCG 660
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACTG 720
consensus_10378#1      ----------------CCCCCCCTACAACGGGCGGACCATTTACTCCCTCATCAAGACTG 44
                                       ***  *  **  * ** ***************************

consensus_10378#0      AACGCATCAACG-CCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGC 779
consensus_10378#1      AACGCATCAACGACCGGCCTGAAACTAACGGTGCTCATCGCGCTGCCGGTGCTGTTCGGC 104
                       ************ ************** ********************************

consensus_10378#0      CTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTC 839
consensus_10378#1      CTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTC 164
                       ************************************************************

consensus_10378#0      ACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTG 899
consensus_10378#1      ACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAAGAGAGCGAGTCCAAGAAGTTCGTG 224
                       *********************************** ************************

consensus_10378#0      CATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGAC 959
consensus_10378#1      CATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGAC 284
                       ************************************************************

consensus_10378#0      TTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCG 1019
consensus_10378#1      TTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCG 344
                       ************************************************************

consensus_10378#0      CAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGT 1079
consensus_10378#1      CAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGT 404
                       ************************************************************

consensus_10378#0      CTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCC 1139
consensus_10378#1      CTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCC 464
                       ************************************************************

consensus_10378#0      TATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCA 1199
consensus_10378#1      TATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCA 524
                       ************************************************************

consensus_10378#0      TTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCTCTGGTG 1259
consensus_10378#1      TTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCT---------------- 568
                       ********************************************                

consensus_10378#0      GTTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTACGGAGCA 1319
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GTCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCCATGGTT 1379
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GCGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTTCTTCCG 1439
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      AAGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGAACGAAT 1499
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GCTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTGGTTCCA 1559
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      ACTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTCCAGATA 1619
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TGGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTAAACGTC 1679
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      ATAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAAGCAATA 1739
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGT 1799
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGAT 1859
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      CGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTG 1919
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      AAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCT 1979
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGA 2039
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      CAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCT 2099
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      ACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAG 2159
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      GAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAA 2219
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGTCCCTTC 2279
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTGTGTTTC 2339
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      CCCAAATCTAGGAGGTTTTGTATAGCTTTATTTTTTTTACAAGGAGAGAGATGCCTCACT 2399
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      CCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATCATCCAT 2459
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACATGCATG 2519
consensus_10378#1      ------------------------------------------------------------
                                                                                   

consensus_10378#0      TTGGTTCTTTTAAAAA 2535
consensus_10378#1      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)