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Oryza sativa
cluster # 10379 cluster # 10379       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10379#0 length = 2748 sequences # 3  
 consensus_10379#1 length = 1228 sequences # 4  
consensusID : consensus_10379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2748
fasta sequence 
                              [CCCTGACCCCCTCCCCCTCTCGATCCCTTCCTTCCTTCCTCCCCCAATCTTCCAATCCGAGAGAGGCGCCGCACGCGTCCCAGATCTATGGTTCGCGCGCCCACTCCACTCCTCCCCCACCGCCGCGCCGACTCGCCGCCGCACCGGCCCTCCGCCGCGGCCGCCGAAGCCGCCTGGCCCCGGGAGTGAACCGAACCCCAGGAGGAACGCGAGGTGAACCGGGCGCCGGAGGCGGGGGCGATGATGATCAGCAGGCAGCTCGTGCTGACCTACCTCTACCTGCTAATCTACGTCTGCCTCTCGTCGGGAGTCATCCTGTTCAACAAGTGGGTACTTTCTCCAAAGTACTTCAAATTTCCCTTTCCTATTACCCTTACAATGATTCACATGGCGTTTTCTGGAGTCGTAACGTTCTTCCTTGTCCGTGTGTTTAAGGTCGTTGCACCAGTCAAGATGACATTCCAAATATATGCCACATGTGTGATTCCAATTAGTGCCTTCTTCGCGTCAAGTCTTTGGTTTGGAAACACAGCATACTTGTATATTTCAGTCGCCTTCATTCAGATGCTCAAGGCCTTGATGCCTGTGGCAACATTTATAATGGCTGTTCTATGTGGTACTGACAAATTAAGATGGGATCTTTTCTTGAACATGGTCTTGGTCAGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGGTATTGCAACTATATCTGAAAAGTTTGCTTGCTTGATATGATTTCAACCAACTACCGTTGAATGAAATAACGACTTCTCTCTTAAAGTCTTACAGAATACTTGTACGAAAAACAAAGAGAATTTTTTAGTTTGCTCTTATAAAAAACATGTAAACTGCCATTTTCTTGAGGTTCCATTAGTGATATTAATGACTTGGTTTTATATAATATGTACAACCAAATGGTGCTAGTGCTACTTTATTGTGCAAGTGCTGTTGTAATGTACACATGTAAATAAAAATCACTAAAACTTATAACACAATTGGTTTTCCTATGACATTTATGAAGAGAACACTGTTCTTCATTTGTAGTAGTTTCTAACCTCAGTTGTTTGAATGAATAAATAAAAGAACAGATTTGAAATGTATATTCGTCGTATTAGATTGCATGTATTAGGCAACAAGAGCATTCGAGAGGTTTATGGCATCTGTCTGTAAGGCTTATATGTGTGGTTTCTTGTTGAGAAGCAGAAAGTAGTTTGTTAGGACTTAGGAACAACCATTTGCTGCCTCAACTTTTGCACTCACTGGTTTTTCTTCTGTAGCCTCTGTGATTATTATGCACTGTTTTTGTCTCCATACAACTAAGCTTTGCATATTCTATATGTCACTAAAATGTTTGTGCCATTTTACTCTCTGCAATTTCTTATATGTATTCTTCTGTTTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTGAATATAATTGGATATGCTGTTGGTAATTATCCATTCAATTTTCTCTAGAAGTAGAATCTATATCTATAATCTTAACCTGTGGTTTTGTGTTCCATTGCATAGCATAAACATGGGGTTATGTTAACATGTGTAACATACTAACATGTTCTTTTGAGTTACAAAGGGACATAAATCCGGGGCTTGTGAAATTTGCTTATACTTTTATTTCAAATATGTTGTTTGTGATTAACCTTCTTAATTAGTATTGCTTTAATGTGTAGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACTCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTCCGTTTCTGGATATTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK103495             [CCCTGACCCCCTCCCCCTCTCGATCCCTTCCTTCCTTCCTCCCCCAATCTTCCAATCCGAGAGAGGCGCCGCACGCGTCCCAGATCTATGGTTCGCGCGCCCACTCCACTCCTCCCCCACCGCCGCGCCGACTCGCCGCCGCACCGGCCCTCCGCCGCGGCCGCCGAAGCCGCCTGGCCCCGGGAGTGAACCGAACCCCAGGAGGAACGCGAGGTGAACCGGGCGCCGGAGGCGGGGGCGATGATGATCAGCAGGCAGCTCGTGCTGACCTACCTCTACCTGCTAATCTACGTCTGCCTCTCGTCGGGAGTCATCCTGTTCAACAAGTGGGTACTTTCTCCAAAGTACTTCAAATTTCCCTTTCCTATTACCCTTACAATGATTCACATGGCGTTTTCTGGAGTCGTAACGTTCTTCCTTGTCCGTGTGTTTAAGGTCGTTGCACCAGTCAAGATGACATTCCAAATATATGCCACATGTGTGATTCCAATTAGTGCCTTCTTCGCGTCAAGTCTTTGGTTTGGAAACACAGCATACTTGTATATTTCAGTCGCCTTCATTCAGATGCTCAAGGCCTTGATGCCTGTGGCAACATTTATAATGGCTGTTCTATGTGGTACTGACAAATTAAGATGGGATCTTTTCTTGAACATGGTCTTGGTCAGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGGTATTGCAACTATATCTGAAAAGTTTGCTTGCTTGATATGATTTCAACCAACTACCGTTGAATGAAATAACGACTTCTCTCTTAAAGTCTTACAGAATACTTGTACGAAAAACAAAGAGAATTTTTTAGTTTGCTCTTATAAAAAACATGTAAACTGCCATTTTCTTGAGGTTCCATTAGTGATATTAATGACTTGGTTTTATATAATATGTACAACCAAATGGTGCTAGTGCTACTTTATTGTGCAAGTGCTGTTGTAATGTACACATGTAAATAAAAATCACTAAAACTTATAACACAATTGGTTTTCCTATGACATTTATGAAGAGAACACTGTTCTTCATTTGTAGTAGTTTCTAACCTCAGTTGTTTGAATGAATAAATAAAAGAACAGATTTGAAATGTATATTCGTCGTATTAGATTGCATGTATTAGGCAACAAGAGCATTCGAGAGGTTTATGGCATCTGTCTGTAAGGCTTATATGTGTGGTTTCTTGTTGAGAAGCAGAAAGTAGTTTGTTAGGACTTAGGAACAACCATTTGCTGCCTCAACTTTTGCACTCACTGGTTTTTCTTCTGTAGCCTCTGTGATTATTATGCACTGTTTTTGTCTCCATACAACTAAGCTTTGCATATTCTATATGTCACTAAAATGTTTGTGCCATTTTACTCTCTGCAATTTCTTATATGTATTCTTCTGTTTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTGAATATAATTGGATATGCTGTTGGTAATTATCCATTCAATTTTCTCTAGAAGTAGAATCTATATCTATAATCTTAACCTGTGGTTTTGTGTTCCATTGCATAGCATAAACATGGGGTTATGTTAACATGTGTAACATACTAACATGTTCTTTTGAGTTACAAAGGGACATAAATCCGGGGCTTGTGAAATTTGCTTATACTTTTATTTCAAATATGTTGTTTGTGATTAACCTTCTTAATTAGTATTGCTTTAATGTGTAGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACTCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAG                                                         ]
[+] EMBL AU067928             [                                                                                                                                                                               GGCCCCGGGAGTGAACCGAACCCCAGGAGGAACGCGAGGTGAACCGGGCGCCGGANG GNGNGCGATGATGATCAGCAGGCAGCTCGTGCTGACCTACCTCTACCNGCTAATCTACGTCTGCCTCTCGTCGGGAGTCATCCTGTTCAACAAGTNGGTACTTTCTCCAAAGTACTTCAAATTTCCCTTTCCTATTACCCTTACAATGATTCACATGGCGTTTTCTGGAGTCGTAACGTTCTTCCTTGTCCGTGTGTTTAAGGTCGTTGCACCAGTCAAGATGACATTCCAAATATATNCCACATGTGTGATTCCAATTAGTGCCTTCTTCGCGTCAAGTCTTTGGTTTGGAAACACAGCATACTTGTATATTTCAGTCGCCTTCATTCAGATGCTCAANGCCTTGATGCCTGTGGCAACATTTATAATGGCTGTTCTATGTGGTACTGACAAATTAAGATGGGATCTTTTCTTGAACATGGTCTTGGTCAGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAA CCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAAGGGTTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU067927             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ccCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGNAGTTTTGTTTCCGTTTCTGGATATTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10379#0
CCCTGACCCCCTCCCCCTCTCGATCCCTTCCTTCCTTCCTCCCCCAATCTTCCAATCCGA
GAGAGGCGCCGCACGCGTCCCAGATCTATGGTTCGCGCGCCCACTCCACTCCTCCCCCAC
CGCCGCGCCGACTCGCCGCCGCACCGGCCCTCCGCCGCGGCCGCCGAAGCCGCCTGGCCC
CGGGAGTGAACCGAACCCCAGGAGGAACGCGAGGTGAACCGGGCGCCGGAGGCGGGGGCG
ATGATGATCAGCAGGCAGCTCGTGCTGACCTACCTCTACCTGCTAATCTACGTCTGCCTC
TCGTCGGGAGTCATCCTGTTCAACAAGTGGGTACTTTCTCCAAAGTACTTCAAATTTCCC
TTTCCTATTACCCTTACAATGATTCACATGGCGTTTTCTGGAGTCGTAACGTTCTTCCTT
GTCCGTGTGTTTAAGGTCGTTGCACCAGTCAAGATGACATTCCAAATATATGCCACATGT
GTGATTCCAATTAGTGCCTTCTTCGCGTCAAGTCTTTGGTTTGGAAACACAGCATACTTG
TATATTTCAGTCGCCTTCATTCAGATGCTCAAGGCCTTGATGCCTGTGGCAACATTTATA
ATGGCTGTTCTATGTGGTACTGACAAATTAAGATGGGATCTTTTCTTGAACATGGTCTTG
GTCAGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACA
TTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTC
CTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGC
AGGTATTGCAACTATATCTGAAAAGTTTGCTTGCTTGATATGATTTCAACCAACTACCGT
TGAATGAAATAACGACTTCTCTCTTAAAGTCTTACAGAATACTTGTACGAAAAACAAAGA
GAATTTTTTAGTTTGCTCTTATAAAAAACATGTAAACTGCCATTTTCTTGAGGTTCCATT
AGTGATATTAATGACTTGGTTTTATATAATATGTACAACCAAATGGTGCTAGTGCTACTT
TATTGTGCAAGTGCTGTTGTAATGTACACATGTAAATAAAAATCACTAAAACTTATAACA
CAATTGGTTTTCCTATGACATTTATGAAGAGAACACTGTTCTTCATTTGTAGTAGTTTCT
AACCTCAGTTGTTTGAATGAATAAATAAAAGAACAGATTTGAAATGTATATTCGTCGTAT
TAGATTGCATGTATTAGGCAACAAGAGCATTCGAGAGGTTTATGGCATCTGTCTGTAAGG
CTTATATGTGTGGTTTCTTGTTGAGAAGCAGAAAGTAGTTTGTTAGGACTTAGGAACAAC
CATTTGCTGCCTCAACTTTTGCACTCACTGGTTTTTCTTCTGTAGCCTCTGTGATTATTA
TGCACTGTTTTTGTCTCCATACAACTAAGCTTTGCATATTCTATATGTCACTAAAATGTT
TGTGCCATTTTACTCTCTGCAATTTCTTATATGTATTCTTCTGTTTTGCAGTTTCATCTT
CCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTT
CAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTT
TCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTG
GATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTGAATAT
AATTGGATATGCTGTTGGTAATTATCCATTCAATTTTCTCTAGAAGTAGAATCTATATCT
ATAATCTTAACCTGTGGTTTTGTGTTCCATTGCATAGCATAAACATGGGGTTATGTTAAC
ATGTGTAACATACTAACATGTTCTTTTGAGTTACAAAGGGACATAAATCCGGGGCTTGTG
AAATTTGCTTATACTTTTATTTCAAATATGTTGTTTGTGATTAACCTTCTTAATTAGTAT
TGCTTTAATGTGTAGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATG
TCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGA
TTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAA
GTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCC
TCTCCTATGTTACTCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTG
AAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGG
GAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAG
TCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACC
TGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGAT
CAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTA
GCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTC
CGTTTCTGGATATTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_10379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1228
fasta sequence 
                              [AAGATGGGATCTTTTCTTGAACATGGTCTTGGTCGGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATATAATTGGATATGCTGTTGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACCCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGT-AGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTCCGTTTCTGGATATTTTGTNCCCATTTTCCGTCNCTGTACTACAGCAAGCACCATGGGTGTATCTGAATATCTCATCTCGACGATAATTTCAAAAAAAAAAAAAA]

[+] EMBL AK058204             [AAGATGGGATCTTTTCTTGAACATGGTCTTGGTCGGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAGGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATATAATTGGATATGCTGTTGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACCCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGT AGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTG                                                                                                            ]
[+] EMBL AU066054             [                                                                               ATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGAAG CCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTNCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATATAATTGGATATGCTGTTGCTCTCTCTGGCGTTGTCATGTACAATTATTTG AGGTGGAAGATG CAGAGCG ACCAACTTCCAGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK059605             [                                                                                                                                                GGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATATAATTGGATATGCTGTTGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGCCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACCCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGT AGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTG                                                                                                            ]
[+] EMBL AU101900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGCCAAACACCTGGAGATGAAGTNAGAAAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGANCAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAANTTGTATTGCAGTTTTGTTTCCGTTTCTGGATATTTTGTNCCCATTTTCCGTCNCTGTACTACAGCAAGCACCATGGGTGTATCTGAATATCTCATCTCGACGATAATTTCAAAAAAAAAAAAAA]




>consensus_10379#1
AAGATGGGATCTTTTCTTGAACATGGTCTTGGTCGGTGTTGGTGTCGTAGTTTCATCATA
TGGCGAGATTCATTTTAATATCATAGGAACATTATACCAAGTAACAGGCATTTTTGCGGA
AGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGGTTAACTCTAAACCC
TATCACAAGCCTATATTATATAGCCCCTTGCAGTTTCATCTTCCTGTTTGTTCCTTGGTT
TTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTTCAACTACTGGATATTTTT
CTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTTTCTAGTTATTGGAAGAAC
AGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTGGATACTCATTGCCCTCTC
AACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATATAATTGGATATGCTGTTGC
TCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATGTCAGAGCGAACCAACT
TCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGATTTCAAACATATACAA
GCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAAGTCTGGCGTCAGAAGG
TGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCCTCTCCTATGTTACCCG
GACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTGAAGTTTTGAGTTAGTT
GAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGGGAGTCTGAAAGAGGTA
TTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAGTCCTGCATTCACCTTG
GTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACCTGGAGATGAAGTAGAG
AAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGATCAATTTGGTAGTTGCG
TTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTAGCAGACCATAGACGAT
GTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTCCGTTTCTGGATATTTT
GTNCCCATTTTCCGTCNCTGTACTACAGCAAGCACCATGGGTGTATCTGAATATCTCATC
TCGACGATAATTTCAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10379#0      CCCTGACCCCCTCCCCCTCTCGATCCCTTCCTTCCTTCCTCCCCCAATCTTCCAATCCGA 60
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      GAGAGGCGCCGCACGCGTCCCAGATCTATGGTTCGCGCGCCCACTCCACTCCTCCCCCAC 120
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      CGCCGCGCCGACTCGCCGCCGCACCGGCCCTCCGCCGCGGCCGCCGAAGCCGCCTGGCCC 180
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      CGGGAGTGAACCGAACCCCAGGAGGAACGCGAGGTGAACCGGGCGCCGGAGGCGGGGGCG 240
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      ATGATGATCAGCAGGCAGCTCGTGCTGACCTACCTCTACCTGCTAATCTACGTCTGCCTC 300
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TCGTCGGGAGTCATCCTGTTCAACAAGTGGGTACTTTCTCCAAAGTACTTCAAATTTCCC 360
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TTTCCTATTACCCTTACAATGATTCACATGGCGTTTTCTGGAGTCGTAACGTTCTTCCTT 420
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      GTCCGTGTGTTTAAGGTCGTTGCACCAGTCAAGATGACATTCCAAATATATGCCACATGT 480
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      GTGATTCCAATTAGTGCCTTCTTCGCGTCAAGTCTTTGGTTTGGAAACACAGCATACTTG 540
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TATATTTCAGTCGCCTTCATTCAGATGCTCAAGGCCTTGATGCCTGTGGCAACATTTATA 600
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      ATGGCTGTTCTATGTGGTACTGACAAATTAAGATGGGATCTTTTCTTGAACATGGTCTTG 660
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      GTCAGTGTTGGTGTCGTAGTTTCATCATATGGCGAGATTCATTTTAATATCATAGGAACA 720
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TTATACCAAGTAACAGGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTC 780
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      CTTCAAAAGAAGGGGTTAACTCTAAACCCTATCACAAGCCTATATTATATAGCCCCTTGC 840
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      AGGTATTGCAACTATATCTGAAAAGTTTGCTTGCTTGATATGATTTCAACCAACTACCGT 900
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TGAATGAAATAACGACTTCTCTCTTAAAGTCTTACAGAATACTTGTACGAAAAACAAAGA 960
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      GAATTTTTTAGTTTGCTCTTATAAAAAACATGTAAACTGCCATTTTCTTGAGGTTCCATT 1020
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      AGTGATATTAATGACTTGGTTTTATATAATATGTACAACCAAATGGTGCTAGTGCTACTT 1080
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TATTGTGCAAGTGCTGTTGTAATGTACACATGTAAATAAAAATCACTAAAACTTATAACA 1140
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      CAATTGGTTTTCCTATGACATTTATGAAGAGAACACTGTTCTTCATTTGTAGTAGTTTCT 1200
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      AACCTCAGTTGTTTGAATGAATAAATAAAAGAACAGATTTGAAATGTATATTCGTCGTAT 1260
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TAGATTGCATGTATTAGGCAACAAGAGCATTCGAGAGGTTTATGGCATCTGTCTGTAAGG 1320
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      CTTATATGTGTGGTTTCTTGTTGAGAAGCAGAAAGTAGTTTGTTAGGACTTAGGAACAAC 1380
consensus_10379#1      ----AAGATGGGATCTTTTCTTGAACATGGTCTTGGTCGGTGTTGGTGTCGTAGTTTCAT 56
                            *  ** * * * ** ****  *       *     **** *       *    * 

consensus_10379#0      CATTTGCTGCCTCAACTTTTGCACTCACTGGTTTTTCTTCTGTAGCCTCTGTGATTATTA 1440
consensus_10379#1      CATATGGCGAGATTCATTTTAATATCATAGGAACAT----TATACC------AAGTAACA 106
                       *** **  *       ****    ***  **    *    * ** *       * **  *

consensus_10379#0      TGCACTGTTTTTGTCTCCATACAACTAAGCTTTGCATATTCTATATGTCACTAAAATGTT 1500
consensus_10379#1      GGCATTTTTGCGGAAGCCCTCAGGCTGGTTCTGACACAGGTCCTCCTTCAAAAGAAGGGG 166
                        *** * **   *   ** *    **     *  ** *     *   ***  * ** *  

consensus_10379#0      TGTGCCATTTTACTCTCTGCAATTTCTTATATGTATTCTTCTGTTTTGCAGTTTCATCTT 1560
consensus_10379#1      TTAACTCTAAACCCTATCACAAGCCTATAT-TATATAGCCCC---TTGCAGTTTCATCTT 222
                       *   *  *    *      ***     *** * ***    *    ***************

consensus_10379#0      CCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTT 1620
consensus_10379#1      CCTGTTTGTTCCTTGGTTTTTACTTGAAAAGCCAGAAATGGATGTTTCTCAAATTCAGTT 282
                       ************************************************************

consensus_10379#0      CAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTT 1680
consensus_10379#1      CAACTACTGGATATTTTTCTTTAATGCAGTTGCTGCATTTGCATTGAACATATCCATCTT 342
                       ************************************************************

consensus_10379#0      TCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTG 1740
consensus_10379#1      TCTAGTTATTGGAAGAACAGGAGCAGTCACCATCCGAGTCGCAGGAGTTCTGAAGGACTG 402
                       ************************************************************

consensus_10379#0      GATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTGAATAT 1800
consensus_10379#1      GATACTCATTGCCCTCTCAACCATTATCTTTCCTGAATCTATTATTACAAGCCTCAATAT 462
                       ****************************************************** *****

consensus_10379#0      AATTGGATATGCTGTTGGTAATTATCCATTCAATTTTCTCTAGAAGTAGAATCTATATCT 1860
consensus_10379#1      AATTGGATATGCTGTTG------------------------------------------- 479
                       *****************                                           

consensus_10379#0      ATAATCTTAACCTGTGGTTTTGTGTTCCATTGCATAGCATAAACATGGGGTTATGTTAAC 1920
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      ATGTGTAACATACTAACATGTTCTTTTGAGTTACAAAGGGACATAAATCCGGGGCTTGTG 1980
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      AAATTTGCTTATACTTTTATTTCAAATATGTTGTTTGTGATTAACCTTCTTAATTAGTAT 2040
consensus_10379#1      ------------------------------------------------------------
                                                                                   

consensus_10379#0      TGCTTTAATGTGTAGCTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATG 2100
consensus_10379#1      ---------------CTCTCTCTGGCGTTGTCATGTACAATTATTTGAAGATGAAAGATG 524
                                      *********************************************

consensus_10379#0      TCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGA 2160
consensus_10379#1      TCAGAGCGAACCAACTTCCAGCTGATATCGCTCCTGACAGAGCTACGAAGGATAAGAAGA 584
                       ************************************************************

consensus_10379#0      TTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAA 2220
consensus_10379#1      TTTCAAACATATACAAGCCTGACAATTTCATGGATTCTAATGATGAAACCACTGTTGGAA 644
                       ************************************************************

consensus_10379#0      GTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCC 2280
consensus_10379#1      GTCTGGCGTCAGAAGGTGCAGGGGTTGATGAAGAAGCCCCTTTGATTCCTTCTTCACGCC 704
                       ************************************************************

consensus_10379#0      TCTCCTATGTTACTCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTG 2340
consensus_10379#1      TCTCCTATGTTACCCGGACACAAACTGGCAGCTTCAATAGCAGATGACCATCATTTTCTG 764
                       ************* **********************************************

consensus_10379#0      AAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGG 2400
consensus_10379#1      AAGTTTTGAGTTAGTTGAGGGAGCAAACTTTGCCCCAGATTAACCAGCTTTCCTCCTGGG 824
                       ************************************************************

consensus_10379#0      GAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAG 2460
consensus_10379#1      GAGTCTGAAAGAGGTATTAGGATGATAAACTATAGCCATATTAGAAGCTCTGGTGAATAG 884
                       ************************************************************

consensus_10379#0      TCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACC 2520
consensus_10379#1      TCCTGCATTCACCTTGGTATATTTTGCTAGTTGGAACTGAATGTGTATTGGCCAGACACC 944
                       ************************************************************

consensus_10379#0      TGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGAT 2580
consensus_10379#1      TGGAGATGAAGTAGAGAAAAGTGCAGGGATAGGGTCAAATGTTTGACCAGTACTTGGGAT 1004
                       ************************************************************

consensus_10379#0      CAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTA 2640
consensus_10379#1      CAATTTGGTAGTTGCGTTAGATATATATTGCTTATTAACCCAGCATATTGAAAATGTTTA 1064
                       ************************************************************

consensus_10379#0      GCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTC 2700
consensus_10379#1      GCAGACCATAGACGATGTAAAGCATTTTATAGATGCTAATTTGTATTGCAGTTTTGTTTC 1124
                       ************************************************************

consensus_10379#0      CGTTTCTGGATATTTTGTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ 2748
consensus_10379#1      CGTTTCTGGATATTTTGTNCCCATTTTCCGTCNCTGTACTACAGCAAGCACCATGGGTGT 1184
                       ****************** ** *              *  * *  **             

consensus_10379#0      --------------------------------------------
consensus_10379#1      ATCTGAATATCTCATCTCGACGATAATTTCAAAAAAAAAAAAAA 1228


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)