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Oryza sativa
cluster # 10393 cluster # 10393       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10393#0 length = 2497 sequences # 6  
consensus_10393#1 length = 636 sequences # 1  

consensusID : consensus_10393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2497
fasta sequence
                              [GCGCCTCCACCCGCCTCGTCGCGTCCAACCACACCCTCTTCCCTTCCCCCGCCGTGGATCCCCTCCCCGAGCGCCAGGACACGGTGGTGAACTACGGCGGTGAGGAGGGGGTGGAGGAGAAGGCGCTCGTGTGCAGGACGGTGTACGCGTGGCGGGAGCCCGTGTCGCCGCACCTGGCGGCGGAGAGGGAGGGGATGCCGGTGGAGGACGAGGAGGTCAGGTGGCTCGTGGACCGGTGGCTGGCGGAGGAGGACGGGGGTGGGGAGGTGTGGAAGGTGCTCGAGACGGCCGGCGGCGTCGCCAGCCCTGGCCCTTCTGGCACGCTCCAATGTGATCTCTATCGGTCCTCTAGGTTACCTGCAGTTCTTGTTGGAGATGGTCGTCTAGGTGGTATTTCATCTACTTTATCTGCCTACGAAACTCTGTTGCTCAGAGGATATGATGTGGGCTCAGTTATTTTGGAAGATCGTGGCTTGTCGAATGACAGATTCCTGCTCTCATACTTGAGAAAGAGGGTACCTGTGCATGTCCTGCCACCAATTCCTGAGGATCCCAAAGACGACCTAACTGATTGGTTTTCTGAGTCATCCTCAGCTTTTAGTTCACTTAAAGATAGTCTGCAATCTTTTCATTCACGAAGAGTTCAAAGGCTAAACAGTATGCAGAGAAAATCAAAGTATTTGTTGTGGTGGCCTTTCACTCAGCATGATCTTGTACCTGTAGATTCTGTTACAGTTATTGATTCGCGTTTTGGTGAGAATTTCTCAGCATACAAGGTTAAAGACAAAACGATTGTTCCCCAGTTTGATGCATGTGCTAGTTGGTGGACACAAGGACCTGATTCTAACTTACAGATTGAACTTGCAAGAGATATGGGTTATGCTGCTGCAAGGTATGGTCATGTGATGTTTCCAGAGAA-TGTTCATGAACCTGCTCTTCGTTGTGCAGAAC-TTTTGC-TTGGT-GGTGTT-GGTAAAGATTGGG-CTTCT-CGAGTTTATTTTTCAGACAATGGATCTACTGCAATTGAAATTGCTTTGAAGATGGCATTTCGTAAATATGCATGTGACCATGGGATTATAGTGGACAGCGAAAAAGATATCAGAAGTGAAGGAAGTGTTCATTTTAAGGTCCTTGCTTTAAATGGTTCCTACCACGGGGATACTTTGGGTGCTATGGAAGCACAAGCTCCATCAGCTTACACATCTTTTCTTCAGCAGCCATGGTACTCGGGGCGAGGACTTTTTCTAGATCCTCCTACAGTGTACATTAAAAACAAAAGCGCCAACCTTTCTCTTCCCCCATCGATAATGCATGATCAACTGAGTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACATCGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGTCAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGGGAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAAAAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTGCTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTGGCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTGACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAG-CTG-AAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTGGAACCATATAAAAGGTGGGGTGTGAGACATGCTATCTGGTTATGTTCACACGAGTTTGTGGCCATCTGTAAAACTGGGTATTTTTGTGAAGTTTTCG]

[+] EMBL AK100945             [GCGCCTCCACCCGCCTCGTCGCGTCCAACCACACCCTCTTCCCTTCCCCCGCCGTGGATCCCCTCCCCGAGCGCCAGGACACGGTGGTGAACTACGGCGGTGAGGAGGGGGTGGAGGAGAAGGCGCTCGTGTGCAGGACGGTGTACGCGTGGCGGGAGCCCGTGTCGCCGCACCTGGCGGCGGAGAGGGAGGGGATGCCGGTGGAGGACGAGGAGGTCAGGTGGCTCGTGGACCGGTGGCTGGCGGAGGAGGACGGGGGTGGGGAGGTGTGGAAGGTGCTCGAGACGGCCGGCGGCGTCGCCAGCCCTGGCCCTTCTGGCACGCTCCAATGTGATCTCTATCGGTCCTCTAGGTTACCTGCAGTTCTTGTTGGAGATGGTCGTCTAGGTGGTATTTCATCTACTTTATCTGCCTACGAAACTCTGTTGCTCAGAGGATATGATGTGGGCTCAGTTATTTTGGAAGATCGTGGCTTGTCGAATGACAGATTCCTGCTCTCATACTTGAGAAAGAGGGTACCTGTGCATGTCCTGCCACCAATTCCTGAGGATCCCAAAGACGACCTAACTGATTGGTTTTCTGAGTCATCCTCAGCTTTTAGTTCACTTAAAGATAGTCTGCAATCTTTTCATTCACGAAGAGTTCAAAGGCTAAACAGTATGCAGAGAAAATCAAAGTATTTGTTGTGGTGGCCTTTCACTCAGCATGATCTTGTACCTGTAGATTCTGTTACAGTTATTGATTCGCGTTTTGGTGAGAATTTCTCAGCATACAAGGTTAAAGACAAAACGATTGTTCCCCAGTTTGATGCATGTGCTAGTTGGTGGACACAAGGACCTGATTCTAACTTACAGATTGAACTTGCAAGAGATATGGGTTATGCTGCTGCAAGGTATGGTCATGTGATGTTTCCAGAGAA TGTTCATGAACCTGCTCTTCGTTGTGCAGAAC TTTTGC TTGGT GGTGTT GGTAAAGATTGGG CTTCT CGAGTTTATTTTTCAGACAATGGATCTACTGCAATTGAAATTGCTTTGAAGATGGCATTTCGTAAATATGCATGTGACCATGGGATTATAGTGGACAGCGAAAAAGATATCAGAAGTGAAGGAAGTGTTCATTTTAAGGTCCTTGCTTTAAATGGTTCCTACCACGGGGATACTTTGGGTGCTATGGAAGCACAAGCTCCATCAGCTTACACATCTTTTCTTCAGCAGCCATGGTACTCGGGGCGAGGACTTTTTCTAGATCCTCCTACAGTGTACATTAAAAACAAAAGCGCCAACCTTTCTCTTCCCCCATCGATAATGCATGATCAACTGAGTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACATCGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGTCAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGGGAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAAAAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTGCTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTGGCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTGACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAG CTG AAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTGGAACCATATAAAAGGTGGGGTGTGAGACATGCTATCTGGTTATGTTCACACGA                                            ]
[+] EMBL AU033128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTCAGCTTTTAGTTCACTTAAAGATAGTCTGCAATCTTTTCATTCACGAAGAGTTCAAAGGCTAAACAGTATGCAGAGAAAATCAAAGTATTTGTTGTGGTGGCCTTTCACTCAGCATGATCTTGTACCTGTAGATTCTGTTACAGTTATTGATTCGCGTNTTGGTGAGAATTTCTCAGCATACAAGGTTAAAGACAAAACGATTGTTCCCCAGTTTGATGCATGTGCTAGTTGGTGGACACAAGGACCTGATTCTAACTTACAGATTGAACTTGCAAGAGATATGGGTTATGCTGCTGCAAGGTATGGTCATGTGATGTNTCCAGAGAATTGTTCATGAACCTGNTCTTCGTTGTGCAGNACTTTTTGCTTTGGTGGGTGTTGGGTAAAGATTGGGCCTTCTCCGAGTTTATTTTTCAGACAATGGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF324464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACTTTGGGTGCTATGGAAGCACAAGCTCCATCAGCTTACACATCTTTTCTTCAGCAGCCATGGTACTCGGGGCGAGGACTTTTTCTAGATCCTCCTACAGTGTACATTAAAAACAAAAGCGCCAACCTTTCTCTTCCCCCATCGATAATGCATGATCAACTGAGTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACATCGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGTCAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGGGAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAAAAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB641824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCCCATCTATAATGCATGATCAACTGAGTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACATCGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGTCAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGGGAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAAAAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTGCTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTGGCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTGACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAG CTG AAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGNGTAATGTGATATACCTTATGTGTGGTCC                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA767581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAAAAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTGCTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTGGCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTGACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAGCCTGNAAGGAGCct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB641825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCCTATACCGCGCATCCCATGGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAG CTG AAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTGGAACCATATAAAAGGTGGGGTGTGAGACATGCTATCTGGTTATGTTCACACGAGTTTGTGGCCATCTGTAAAACTGGGTATTTTTGTGAAGTTTTCG]


>consensus_10393#0 GCGCCTCCACCCGCCTCGTCGCGTCCAACCACACCCTCTTCCCTTCCCCCGCCGTGGATC CCCTCCCCGAGCGCCAGGACACGGTGGTGAACTACGGCGGTGAGGAGGGGGTGGAGGAGA AGGCGCTCGTGTGCAGGACGGTGTACGCGTGGCGGGAGCCCGTGTCGCCGCACCTGGCGG CGGAGAGGGAGGGGATGCCGGTGGAGGACGAGGAGGTCAGGTGGCTCGTGGACCGGTGGC TGGCGGAGGAGGACGGGGGTGGGGAGGTGTGGAAGGTGCTCGAGACGGCCGGCGGCGTCG CCAGCCCTGGCCCTTCTGGCACGCTCCAATGTGATCTCTATCGGTCCTCTAGGTTACCTG CAGTTCTTGTTGGAGATGGTCGTCTAGGTGGTATTTCATCTACTTTATCTGCCTACGAAA CTCTGTTGCTCAGAGGATATGATGTGGGCTCAGTTATTTTGGAAGATCGTGGCTTGTCGA ATGACAGATTCCTGCTCTCATACTTGAGAAAGAGGGTACCTGTGCATGTCCTGCCACCAA TTCCTGAGGATCCCAAAGACGACCTAACTGATTGGTTTTCTGAGTCATCCTCAGCTTTTA GTTCACTTAAAGATAGTCTGCAATCTTTTCATTCACGAAGAGTTCAAAGGCTAAACAGTA TGCAGAGAAAATCAAAGTATTTGTTGTGGTGGCCTTTCACTCAGCATGATCTTGTACCTG TAGATTCTGTTACAGTTATTGATTCGCGTTTTGGTGAGAATTTCTCAGCATACAAGGTTA AAGACAAAACGATTGTTCCCCAGTTTGATGCATGTGCTAGTTGGTGGACACAAGGACCTG ATTCTAACTTACAGATTGAACTTGCAAGAGATATGGGTTATGCTGCTGCAAGGTATGGTC ATGTGATGTTTCCAGAGAATGTTCATGAACCTGCTCTTCGTTGTGCAGAACTTTTGCTTG GTGGTGTTGGTAAAGATTGGGCTTCTCGAGTTTATTTTTCAGACAATGGATCTACTGCAA TTGAAATTGCTTTGAAGATGGCATTTCGTAAATATGCATGTGACCATGGGATTATAGTGG ACAGCGAAAAAGATATCAGAAGTGAAGGAAGTGTTCATTTTAAGGTCCTTGCTTTAAATG GTTCCTACCACGGGGATACTTTGGGTGCTATGGAAGCACAAGCTCCATCAGCTTACACAT CTTTTCTTCAGCAGCCATGGTACTCGGGGCGAGGACTTTTTCTAGATCCTCCTACAGTGT ACATTAAAAACAAAAGCGCCAACCTTTCTCTTCCCCCATCGATAATGCATGATCAACTGA GTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACAT CGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGT CAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGG GAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAA AAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTG CTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTG GCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTG ACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTA CCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATC TTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCC TGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTG AGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTG AGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCAT GCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGT TGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATA AAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATA ATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATT GTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTG GAACCATATAAAAGGTGGGGTGTGAGACATGCTATCTGGTTATGTTCACACGAGTTTGTG GCCATCTGTAAAACTGGGTATTTTTGTGAAGTTTTCG



consensusID : consensus_10393#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence
                              [GGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAATTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTGGAACCATAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU086046             [GGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATCTTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAATTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTGGAACCATAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10393#1 GGGCTGTACCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAA TATTGATCTTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTT ATCGTCCCTGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCT AAAGGCTGAGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACA ATTCGTGAGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGT GGTCCATGCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTT CAAAAGTTGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAG TCCCATAAAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTT GCCAATAATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGG GTTAATTGTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGAC ATAATTGGAACCATAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10393#0      GCGCCTCCACCCGCCTCGTCGCGTCCAACCACACCCTCTTCCCTTCCCCCGCCGTGGATC 60
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CCCTCCCCGAGCGCCAGGACACGGTGGTGAACTACGGCGGTGAGGAGGGGGTGGAGGAGA 120
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      AGGCGCTCGTGTGCAGGACGGTGTACGCGTGGCGGGAGCCCGTGTCGCCGCACCTGGCGG 180
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CGGAGAGGGAGGGGATGCCGGTGGAGGACGAGGAGGTCAGGTGGCTCGTGGACCGGTGGC 240
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      TGGCGGAGGAGGACGGGGGTGGGGAGGTGTGGAAGGTGCTCGAGACGGCCGGCGGCGTCG 300
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CCAGCCCTGGCCCTTCTGGCACGCTCCAATGTGATCTCTATCGGTCCTCTAGGTTACCTG 360
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CAGTTCTTGTTGGAGATGGTCGTCTAGGTGGTATTTCATCTACTTTATCTGCCTACGAAA 420
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CTCTGTTGCTCAGAGGATATGATGTGGGCTCAGTTATTTTGGAAGATCGTGGCTTGTCGA 480
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ATGACAGATTCCTGCTCTCATACTTGAGAAAGAGGGTACCTGTGCATGTCCTGCCACCAA 540
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      TTCCTGAGGATCCCAAAGACGACCTAACTGATTGGTTTTCTGAGTCATCCTCAGCTTTTA 600
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GTTCACTTAAAGATAGTCTGCAATCTTTTCATTCACGAAGAGTTCAAAGGCTAAACAGTA 660
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      TGCAGAGAAAATCAAAGTATTTGTTGTGGTGGCCTTTCACTCAGCATGATCTTGTACCTG 720
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      TAGATTCTGTTACAGTTATTGATTCGCGTTTTGGTGAGAATTTCTCAGCATACAAGGTTA 780
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      AAGACAAAACGATTGTTCCCCAGTTTGATGCATGTGCTAGTTGGTGGACACAAGGACCTG 840
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ATTCTAACTTACAGATTGAACTTGCAAGAGATATGGGTTATGCTGCTGCAAGGTATGGTC 900
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ATGTGATGTTTCCAGAGAATGTTCATGAACCTGCTCTTCGTTGTGCAGAACTTTTGCTTG 960
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GTGGTGTTGGTAAAGATTGGGCTTCTCGAGTTTATTTTTCAGACAATGGATCTACTGCAA 1020
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      TTGAAATTGCTTTGAAGATGGCATTTCGTAAATATGCATGTGACCATGGGATTATAGTGG 1080
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ACAGCGAAAAAGATATCAGAAGTGAAGGAAGTGTTCATTTTAAGGTCCTTGCTTTAAATG 1140
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GTTCCTACCACGGGGATACTTTGGGTGCTATGGAAGCACAAGCTCCATCAGCTTACACAT 1200
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CTTTTCTTCAGCAGCCATGGTACTCGGGGCGAGGACTTTTTCTAGATCCTCCTACAGTGT 1260
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ACATTAAAAACAAAAGCGCCAACCTTTCTCTTCCCCCATCGATAATGCATGATCAACTGA 1320
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GTTCTTGTGATACATGTTTTTCCTCATTAACTGAAGTTTTTTGCAAGACCAGGGACACAT 1380
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CGTCTGCTGCTAATGTATATGTTTCATACATATCACAACAACTATCACAGTATGCTATGT 1440
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CAAATAATTCAGAGCATATTGCAGCATTAATTATAGAGCCAGTAATACAAGGTGCAGGGG 1500
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GAATGCATTTGATAGATCCCCTTTTCCAGAGATTACTTGTCAAAGAGTGTAAAAATCGAA 1560
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      AAATTCCTGTCATATTTGATGAGGTATTTACAGGATTTTGGCGTCTCGGTGTGGAGTCTG 1620
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      CTTCAGAGTTGCTTGGCTGTTTTCCTGATATCTCTTGTTATGCTAAATTGATGACTGGTG 1680
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      GCATTGTACCATTGGCTGCAACTTTAGCTACAGAGCCTATTTTTGAAGCCTTCAGAAGTG 1740
consensus_10393#1      ------------------------------------------------------------
                                                                                   

consensus_10393#0      ACTCTAAGCTAACAGCACTCTTGCATGGCCATTCCTATACCGCGCATCCCATGGGCTGTA 1800
consensus_10393#1      ----------------------------------------------------GGGCTGTA 8
                                                                           ********

consensus_10393#0      CCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATC 1860
consensus_10393#1      CCGCAGCAGTAAAAGCTATCCAATGGTATAAAGATCCCTCCACCAATTCAAATATTGATC 68
                       ************************************************************

consensus_10393#0      TTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCC 1920
consensus_10393#1      TTGATCGTATGAAGCTGAAGGAGCTATGGGATAGTGCACTAGTGAACCATTTATCGTCCC 128
                       ************************************************************

consensus_10393#0      TGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTG 1980
consensus_10393#1      TGCCAAATGTGAAAAGAGTGGTGTCCTTAGGAACTCTGTGTGCAATCGAGCTAAAGGCTG 188
                       ************************************************************

consensus_10393#0      AGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAACTTCGTG 2040
consensus_10393#1      AGGGATCAGATGCTGGGTACGCATCACTTTATGCGAGTTCCTTAATCCGACAA-TTCGTG 247
                       ***************************************************** ******

consensus_10393#0      AGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCAT 2100
consensus_10393#1      AGGAGGATAACATCTACGCTCGGCCCCTGGGTAATGTGATATACCTTATGTGTGGTCCAT 307
                       ************************************************************

consensus_10393#0      GCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGT 2160
consensus_10393#1      GCACAACTCAAGATAGCTGCACTCGCCAGCTCGCCAAAGTGCATCGTAGACTTCAAAAGT 367
                       ************************************************************

consensus_10393#0      TGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATA 2220
consensus_10393#1      TGAATTGAGTTCGCCACTAACAATAGTGAGCAGAATAATGAGGTATCAGACAGTCCCATA 427
                       ************************************************************

consensus_10393#0      AAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATA 2280
consensus_10393#1      AAATAAAAGGGTTTGTGTCCATGCCATTATAATTTTCGCGTTGAATTGAGTTTGCCAATA 487
                       ************************************************************

consensus_10393#0      ATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATT 2340
consensus_10393#1      ATATTTAATGAGCAGAATAATGAGGTGTCAGACAGTACCCGTAAAATAAAAGGGTTAATT 547
                       ************************************************************

consensus_10393#0      GTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTG 2400
consensus_10393#1      GTATCCATGATATTATAACTTTCACGGTTTTGAAATATGTCATTACTATTGACATAATTG 607
                       ************************************************************

consensus_10393#0      GAACCATATAAAAGGTGGGGTGTGAGACATGCTATCTGGTTATGTTCACACGAGTTTGTG 2460
consensus_10393#1      GAACCATAAAAAAAAAAAAAAAAAAAAAA------------------------------- 636
                       ******** ****           * * *                               

consensus_10393#0      GCCATCTGTAAAACTGGGTATTTTTGTGAAGTTTTCG 2497
consensus_10393#1      -------------------------------------
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)