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Oryza sativa
cluster # 10396 cluster # 10396       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10396#0 length = 1822 sequences # 6  
consensus_10396#1 length = 1658 sequences # 1  

consensusID : consensus_10396#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1822
fasta sequence
                              [GAATTCACGCGCGCGGGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTTTTGCATGGGTGATATTTATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAGACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGATGCAACCATCAGAGATATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCTGCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGCCTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAAGAAAAGGC-AAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTTTAGAAGCAGTCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGTTCACTGTATCCAAGTGGAATAAAA-CAGTGCAATTGTGGGTGTGAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF306848             [GAATTCACGCGCGCGGGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK067870             [             CGGGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTTTTGCATGGGTGATATTTATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAGACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGATGCAACCATCAGAGATATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCTGCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGCCTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAAGAAAAGGC AAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTTTAGAAGCAGTCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGTTCACTGTATCCAAGTGGAATAAAA CAGTGCAATT                                                ]
[+] EMBL CB675179             [                       CTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTTTTGCATGGGTGATATTTATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA753288             [                                  CTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGAGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGATGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTCTTGCATGGGTGATATTTATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAAAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAGACCCTCCGAGTTAAAGATGATGAACTTCCCCAGTNATTGCCAGATATCCG GCACGTGATGCAA CATCAGAGAGA TACAGATAAA TACAGGAGACTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB675180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAAGAAAAGGCAAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTTTAGAAGCAGCCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGTTCACTGTATCCAGGTGGAATAAAACCAGTGCAATTGTGGGTGTGAAAAAAAAGA                             ]
[-] EMBL CF305368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAGTTCCCCAACGTGTTCCCTGTATCCAAGTGGAATAAAA CAGTGCAATTGTGGGTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10396#0 GAATTCACGCGCGCGGGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATG GCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGG CGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCC GATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATG GAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACA AGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGT TTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTTTTGCATGGGTGATATTT ATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCA CAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCC ACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGT GGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACT GCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTG GGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAG ACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGAT GCAACCATCAGAGATATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCT GCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGC CTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAA GAAAAGGCAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTC TTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTT TAGAAGCAGTCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATA TGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCG TAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAG TCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATG ATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAG TTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATC CTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCT TGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCT TGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAA CATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGT TCACTGTATCCAAGTGGAATAAAACAGTGCAATTGTGGGTGTGAAAAAAAAGAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10396#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1658
fasta sequence
                              [GGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAGACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGATGCAACCATCAGAGAGATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCTGCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGCCTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAAGAAAAGGCAAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTTTAGAAGCAGCCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGTTCACTGTATCCAAGTGGAATAAAACAGTGCAATT]

[+] EMBL AK059496             [GGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTATATTGGAACCCCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAGACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGATGCAACCATCAGAGAGATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCTGCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGCCTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAAGAAAAGGCAAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATTTTAGAAGCAGCCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTGTTCACTGTATCCAAGTGGAATAAAACAGTGCAATT]


>consensus_10396#1 GGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATGGCGTCGAGCGGGAGC AGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGGCGGCAGCTCTCGTCC ACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCCGATACACTAAGAAAA TGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATGGAATACAAGATTCGT AGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACAAGCACTGTGACGTTG TCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGTTTCTATATTGGAACC CCACAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTG TCCACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTG GGTGGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCG ACTGCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCT TTGGGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATG GAGACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGT GATGCAACCATCAGAGAGATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACT GCTGCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAA CGCCTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCG GAAGAAAAGGCAAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCT GCTCTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTA ATTTTAGAAGCAGCCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCT GATATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAA CTCGTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAA CAAGTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAA GATGATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAAC ATAGTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAAT AATCCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAAC AGCTTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCT GGCTTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTG CAAACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAAC GTGTTCACTGTATCCAAGTGGAATAAAACAGTGCAATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10396#0      GAATTCACGCGCGCGGGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATG 60
consensus_10396#1      ---------------GGGACAGCCTTCCGACCTCCTCCCCTCTGATCCGGCGCGGCCATG 45
                                      *********************************************

consensus_10396#0      GCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGG 120
consensus_10396#1      GCGTCGAGCGGGAGCAGCACGGTGGTGGGAGAGATGGAGAGCAGCTTGGAGCGGGTGAGG 105
                       ************************************************************

consensus_10396#0      CGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCC 180
consensus_10396#1      CGGCAGCTCTCGTCCACCTCCAGCCGCCACCTCCTTCAGGGCCCTCTCCTGAAGCGATCC 165
                       ************************************************************

consensus_10396#0      GATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATG 240
consensus_10396#1      GATACACTAAGAAAATGGAATGAACGGTGGGTTATACTTGATCCTGCAACTGGAAAGATG 225
                       ************************************************************

consensus_10396#0      GAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACA 300
consensus_10396#1      GAATACAAGATTCGTAGAAGTGATGCAGCTGTGAGGGGAATAATAGTGTTTGATTCAACA 285
                       ************************************************************

consensus_10396#0      AGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGT 360
consensus_10396#1      AGCACTGTGACGTTGTCGCCAATGAACTTTCATGGACTGCCGAAATATGATGGATGCTGT 345
                       ************************************************************

consensus_10396#0      TTCTGTATCCACACGGACTAACTTTTTTTAACCTTACATTCTTTTGCATGGGTGATATTT 420
consensus_10396#1      TTCT-------------------------------------------------------- 349
                       ****                                                        

consensus_10396#0      ATTTTGGGACCCTCTATTTTGTTTTATTCAATGACTAATGTTCTAGATATTGGAACCCCA 480
consensus_10396#1      ----------------------------------------------ATATTGGAACCCCA 363
                                                                     **************

consensus_10396#0      CAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCC 540
consensus_10396#1      CAGAAAAAGGAATATTTTCTTTGTGCAGAAACTCCTAGTGCTGCAAGAGCTTGGGTGTCC 423
                       ************************************************************

consensus_10396#0      ACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGT 600
consensus_10396#1      ACTTTACATGCTTCTCAGTTGGTGCTACAAGCTCACAAAGAAGCAGTGAATTCGTTGGGT 483
                       ************************************************************

consensus_10396#0      GGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACT 660
consensus_10396#1      GGAAATGGTCCTACCAAATTGGGAAAAGTTGCTACAGTTGTGGCTGTGGCCAATGCGACT 543
                       ************************************************************

consensus_10396#0      GCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTG 720
consensus_10396#1      GCAATCGAAGCATCCAAAGAGGTAGAGGCAGCGATGAAGGTATCCCTGCGGGCAGCTTTG 603
                       ************************************************************

consensus_10396#0      GGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAG 780
consensus_10396#1      GGCTCAACTACAAATAAACTCAGTAAAGGTCAATTAGATGATCTCACTATAATGATGGAG 663
                       ************************************************************

consensus_10396#0      ACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGAT 840
consensus_10396#1      ACCCTTCGAGTTAAAGATGATGAACTTCACCAGTTATTGCAAGATATCCGTGCACGTGAT 723
                       ************************************************************

consensus_10396#0      GCAACCATCAGAGATATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCT 900
consensus_10396#1      GCAACCATCAGAGAGATTACAGATAAATTACAGGAGACTGCTGAAGCAGCTGAAACTGCT 783
                       ************** *********************************************

consensus_10396#0      GCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGC 960
consensus_10396#1      GCTTCTGCAGCTCATTCAATAGATGAGCAGAGAAGATTTTTATCTTCAGAACTTGAACGC 843
                       ************************************************************

consensus_10396#0      CTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAA 1020
consensus_10396#1      CTGAAACAAGATCAGGAAAAACAAATTGAATTTTCATTGCTTAGGTTAAGGGAATCGGAA 903
                       ************************************************************

consensus_10396#0      GAAAAGGCAA-GCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCT 1079
consensus_10396#1      GAAAAGGCAAAGCTTCTTTCAGAAGAGAGGGAGCATTTACTCAAGGAAAGAGATTCTGCT 963
                       ********** *************************************************

consensus_10396#0      CTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATT 1139
consensus_10396#1      CTTCAAGAAGCTCAAATGTGGCGTTCTGAACTAGGAAAAGCTAGAGGAAATGCTGTAATT 1023
                       ************************************************************

consensus_10396#0      TTAGAAGCAGTCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGAT 1199
consensus_10396#1      TTAGAAGCAGCCGTTGTGAGGGCGGAAGAGAAAGCAAGAGTTTCAGCAGCAGATGCTGAT 1083
                       ********** *************************************************

consensus_10396#0      ATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTC 1259
consensus_10396#1      ATGCGAATAAATGATGCTGCGAGTAGACTCGATTCTGCGACAAAAGAAAAGGAAGAACTC 1143
                       ************************************************************

consensus_10396#0      GTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAA 1319
consensus_10396#1      GTAGCTCTTGTGGACGCGCTACAGTTGCAAATACGAAGCCAAGACACTAGCACAAAACAA 1203
                       ************************************************************

consensus_10396#0      GTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGAT 1379
consensus_10396#1      GTCTGCGAGGAGAGGTCGGAGCTGTGCTCCACGTCTTCAAAGCATGTAGACATGGAAGAT 1263
                       ************************************************************

consensus_10396#0      GATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATA 1439
consensus_10396#1      GATAATGTGGATAAAGCTTGCTTAAGTGATACAGATCCAATACCCATTACTGAGAACATA 1323
                       ************************************************************

consensus_10396#0      GTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAAT 1499
consensus_10396#1      GTTGATTTGGATGATGATGGAGTCGATATCCCTACAATTGGGGTCACGGAGTGGAATAAT 1383
                       ************************************************************

consensus_10396#0      CCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGC 1559
consensus_10396#1      CCTCATTCTTCTGAAGTATCTGATGTAAGAGAAGTAACCACTGAACCTGAAGATAACAGC 1443
                       ************************************************************

consensus_10396#0      TTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGC 1619
consensus_10396#1      TTGGATATTCCTGTTGATAGCCAACCAGTATCTGAGAATGCTTTCCACGGTTAACCTGGC 1503
                       ************************************************************

consensus_10396#0      TTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAA 1679
consensus_10396#1      TTGTTTCTATTCTTAACCCCGTTGGCTTGTATTCTATGTTCTCATTTTAGTTCATTGCAA 1563
                       ************************************************************

consensus_10396#0      ACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTG 1739
consensus_10396#1      ACATTCATATATTCAAATTAAAGCTCGCTATGAGCTCATGGACTTTAGTTCCACAACGTG 1623
                       ************************************************************

consensus_10396#0      TTCACTGTATCCAAGTGGAATAAAACAGTGCAATTGTGGGTGTGAAAAAAAAGAAAAAAA 1799
consensus_10396#1      TTCACTGTATCCAAGTGGAATAAAACAGTGCAATT------------------------- 1658
                       ***********************************                         

consensus_10396#0      AAAAAAAAAAAAAAAAAAAAAAA 1822
consensus_10396#1      -----------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)