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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10398#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1755 fasta sequence
[GTCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC-C-TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC-CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA-TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTTTATGTGCCA]
[+] EMBL AK070633 [GTCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC C TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGCGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACT ]
[+] EMBL AK104960 [ TCGCGCCGCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC C TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGATAATGACTACTAGGGGGTACCAGAACATTGCTGTCAAGTACTTGCAGAAAACAGGGCTACGACACAGCAAGATGCAATTGAAGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACT ]
[+] EMBL CB665770 [ GCCATCTCCTCTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGCGC TTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTACGGGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAACAGAATGGTCTACCACAAACACTAGGATATTTTG ]
[+] EMBL CB664748 [ CTCCCAATCGCGCGCATCCGACCTCCTTCTTTCCCAATCGCGCCGC CGTTCTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCCGCGCCGCCGCGTTCCCAACTCCATGTCCCGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGCGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAATCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTACGGTACCGCGATCAATTGGTAAGAAACCGAACCCAGTCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGGAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCATCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCAGACAATCTCTGCGCAGAAGGATTTGTCGACAGTGAGACATGTAATGGAAGTGGAATGAAGGAGTTTGACAAAGCAGAATGGTCTACCACAAACACTAGGATATTTTGTGAACTATGCGTAGAACAAATCGAAGCCGGCAATAGGCCTATCGGGgat ]
[+] EMBL CB618498 [ CTCCACCCCCGGCGCGCGAGCAGCCTTCTCCACCCCCGGCAGCGCCGCCGCGTTCCCAACTCCATGTCCTGTCTTCTTCCCTGAACCGCGCCACCGCCGTCCCTGCCCTCACTCCGTACCCCGCCTTTGTCTCCAGGCTGTGGCGACGCGGCCCCAACTCCTGGATGCAGTGTCTCACAGCTGATGATGTAATCAGGAAAATTACTGAATTTTTTCAGTCCACTGGGACCCGACGATTTGTCACACAACGGCAGTGAGACAATCAGTGGAGATGGAGCCTGCAAATGCGGAGGACAGTGTCGCCAAAGCCCTGCGGTACCGCGATCAATTGGTAAGAAACCGAACCCAATCCAGAGGAATCCATGGCGTGGTTGAAGAAGATGAAGAAGATGGCCATCATTGCTTGCCCGAACTCCATGGCAGCAATTCGTTCCAAGTGGTGGAGGATGCATCCTCGGCTGCACGTCGTGGGCGCCGCGGCGGGCATGATGGTGGACGTGGGAAGAGACCCACCACACAATCGATTAGCAGTGCACCATCCTCGGCAGCACGTGGTGGTCGACCGAGGAAGGCGCCATACAAGCAGCCACGGCCGTCGAGCAGTGGAGCTGCTAC CGGGGTAACGGCCAGTGCACACAATCTCTGCGCACAAGGATTTGTCGACAGTGAGACATCTAATGGAAGTGGAATGAAGGAGGTTGACAAAGCATAATGGTCTACCACAAACtatttt ]
[-] EMBL CB664749 [ AGAACCGATGGGATATACTAAAAGCCTTGTATAGCTTTTGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAAGTGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTT ]
[-] EMBL CB665771 [ TGGCTTGGCCTCCTCAAAGATACAGGGCTTGGATGGGATAGTACACAAGGAACAGTTTCAGCAAGTGATAAATACTGGAAGCAAGTCACTAAGGGTCATTCTGAATGGAAGAAGCTACAACATGGTCCCCCGGATTGTGAAGATTTATTGAGTCAAATGTTTGCTGAGGTTGCTGTTGATGGTTCTTCTGCTTGTGCACCTGGAGAGGATGTTGGAGGGGCTGGTGTACAAAGCCTTGATGACACACCAGTGGACATCTCATTGCATAGATACACAACGAATAACAAATCAGTGAAACGAGGGTGTATTACCACTGAAAATAGTCCACTGAAGAAGGTTAAGAACCCCATGGTTAAGGTGATGAAGAATATTCAGTCCACTTTGGACACCAATTGTAGTATTGCCAACAAGGTGATGCAAGGTGAATTTAGGTACAACTCTATTAAGGAAGTGATGGACTTGGTAGTGGAGTGTGGGGCAGCAGAAGGAAGTGCCGAGCATTTCATGGCTACGCAATTATTTGTGAAATCTTTTCACATCGTGACGTGTTCAAGACTTTTACCACCAAGGAGGGAAGGCTCAGTTGGTTGAAGAGGTGGTGCATGAAGGAAGGCTTGGAGTAGGATAGTGCTAATTATTTATATGCATGAACTTATCATCTTTGTTTAAATTTTGTGAGACAATATGTATTAGCAAGACAACTTCTATTTATATGCATGAACTAA TGAATTGCCCATGTAATATGACGCTTTAATTTGAATGCATGAACTTTTATGTGCCA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||