cluster # 10405

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Oryza sativa
cluster # 10405 cluster # 10405 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10405#0 length = 1343 sequences # 7
consensusID : consensus_10405#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1343
fasta sequence
                              [CATATGAAAACCAGGGTTTAACGGATGCCTATATTATCTATCTGAATGCTGATGAGTCTATCGACGCAACAAAGAAGGGGAGCCTGGCAAGATTCATCAACCATTCGTGCCAACCAAACTGTGAGACAAGGAAATGGAATGTTCTTGGGGAAGTAAGAGTGGGAATTTTTGCGAAACAAGATATTCCAATCGGAACGGAACTATCCTATGACTACAACTTTGAGTGGTTTGGTGGTGCAATGGTGAGGTGCCTTTGTGGAGCTGGCAGCTGTTCTGGATTTCTTGGGGTTAAATCACGTGGTTTCCAGGAGGCTACATACCTGTGGGAAGATGATGATGACAGGTTTTCTGTTGAGAATGTTCCCCTTTATGATTCTGCTGATGATGAACCTACCAGCATTCCAAAGGACATCTTAATAAAAGATGAGCCAAATACACAGGATGGCAACAACAACACAATCCAAAATACTGGGATTCCTATTATTGCAAGTTCAAGTGAATTCACACCGATGAATGTTGAACCATCGATTGCGAGTTCAAATGAGTTCA-CACCGATGAATGTTGAACCATTGAATGTGAGCTCAAATGAATTGACACCAATGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA-AAATTATGCAAGGTCATATTTTTCTTATTGCAAATACCATTAACGTGAGTATGTTTACTCATGGAAACCC]

[+] EMBL AK073414             [CATATGAAAACCAGGGTTTAACGGATGCCTATATTATCTATCTGAATGCTGATGAGTCTATCGACGCAACAAAGAAGGGGAGCCTGGCAAGATTCATCAACCATTCGTGCCAACCAAACTGTGAGACAAGGAAATGGAATGTTCTTGGGGAAGTAAGAGTGGGAATTTTTGCGAAACAAGATATTCCAATCGGAACGGAACTATCCTATGACTACAACTTTGAGTGGTTTGGTGGTGCAATGGTGAGGTGCCTTTGTGGAGCTGGCAGCTGTTCTGGATTTCTTGGGGTTAAATCACGTGGTTTCCAGGAGGCTACATACCTGTGGGAAGATGATGATGACAGGTTTTCTGTTGAGAATGTTCCCCTTTATGATTCTGCTGATGATGAACCTACCAGCATTCCAAAGGACATCTTAATAAAAGATGAGCCAAATACACAGGATGGCAACAACAACACAATCCAAAATACTGGGATTCCTATTATTGCAAGTTCAAGTGAATTCACACCGATGAATGTTGAACCATCGATTGCGAGTTCAAATGAGTTCA CACCGATGAATGTTGAACCATTGAATGTGAGCTCAAATGAATTGACACCAATGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGCGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGGTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATGAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATTGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTACAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA AAATTATGCAAGGTCATATTTTTCTTATTGCAAATACCATTAACGTGAGTATGTTTACTCAT        ]
[+] EMBL CA753271             [CATATGAAAACCAGGGTTTAACGGATGCCTATATTATCTATCTGAATGCTGATGAGTCTATCGACGCAACAAAGAAGGGGAGCCTGGCAAGATTCATCAACCATTCGTGCCAACCAAACTGTGAGACAAGGAAATGGAATGTTCTTGGGGAAGTAAGAGTGGGAATTTTTGCGAAACAAGATATTCCAATCGGAACGGAACTATCCTATGACTACAACTTTGAGTGGTTTGGTGGTGCAATGGTGAGGTGCCTTTGTGGAGCTGGCACCTGTTCTGGATTTCTTGGGGCTAAATCACGTGGTTTCCGGGAGGCTACATACCTGTGGGAAGATGATGATGACAGGTTTNCTGTTGAAAATGTTCCCCTGTATGATTCTGCTGATGATAACCCTACC GCTTTTCAAAGGACCTC TAATTAAACATGA CCAAATTCCCGGGATGGCA  NAC ACCCAATTCAAAtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB631181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAACCATCGATTGCGAGTTCAAATGAGTTCACCACCGATGAATGTTGAACCATTGAATGTGAGCTCAAATGAATTGACACCAATGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA AAATTATGCAAGGTCATATTTTTCTTATTGCAAATACCATTAACGTGAGTATGTTTACTCATGGAAACCC]
[-] EMBL CB634274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGTTCA CACCGATGAATGTTGAACCATTGAATGTGAGCTCAAATGAATTGACACCAATGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA AGATTATGCAAGGTCATATTTT                                                ]
[-] EMBL CB634163             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAACCATTGAATGTGAGCTCAAATGAATTGACACCAATGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGAGGAATTATGCAAGGTCATATTTT                                                ]
[-] EMBL CB631180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAGTTGATTTTACTCAGAATGGATCAATTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAAACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAACGTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTGTGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGGAAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACCCCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA AAATTATGCAAGGTCATATTTTTCTTATTGCAAATTCCAAGAACGTGAGTATGTTTACTC          ]
[+] EMBL AU225316             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gccgcTGAAGAATGAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGATCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGATTGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGAATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTACAGAGCAAAATGGATTGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAAAAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATACAATTTGGTTAAGA AAATTATGCAAGGTCATATTTTTCTTATTGCAAATACCATTAACGTGAGTATG                 ]




>consensus_10405#0
CATATGAAAACCAGGGTTTAACGGATGCCTATATTATCTATCTGAATGCTGATGAGTCTA
TCGACGCAACAAAGAAGGGGAGCCTGGCAAGATTCATCAACCATTCGTGCCAACCAAACT
GTGAGACAAGGAAATGGAATGTTCTTGGGGAAGTAAGAGTGGGAATTTTTGCGAAACAAG
ATATTCCAATCGGAACGGAACTATCCTATGACTACAACTTTGAGTGGTTTGGTGGTGCAA
TGGTGAGGTGCCTTTGTGGAGCTGGCAGCTGTTCTGGATTTCTTGGGGTTAAATCACGTG
GTTTCCAGGAGGCTACATACCTGTGGGAAGATGATGATGACAGGTTTTCTGTTGAGAATG
TTCCCCTTTATGATTCTGCTGATGATGAACCTACCAGCATTCCAAAGGACATCTTAATAA
AAGATGAGCCAAATACACAGGATGGCAACAACAACACAATCCAAAATACTGGGATTCCTA
TTATTGCAAGTTCAAGTGAATTCACACCGATGAATGTTGAACCATCGATTGCGAGTTCAA
ATGAGTTCACACCGATGAATGTTGAACCATTGAATGTGAGCTCAAATGAATTGACACCAA
TGACTATTGAACCATTGAATGCTATTCCAATGGGAGTTGATTTTACTCAGAATGGATCAA
TTGAATATGGTGCGCAATGTGCTGAAGATGCTCTGCAAAACTCAACGCGTGGAGTTGCAA
ACCTCCAGAATCAAAGTGTGCCCCGGGACAACAACCATACAGAGTTGGTTGCGGTGAAAC
GTAGACCCACACTTCGTGGTGGAAAAGCTAAACGTGCTATGCGCAAGCAACTGAATGTTG
TGGGTATCTGTGATCGGTTAGCATCAGAGGTGGCACGTGAAGAAATATTGTATTGCGAGG
AAATGAAGAATCAAGCTGCTGCTGAAATTGACAGCCTGTACGACGAGATAAGGCCGGCGA
TCGAAGAGCATGAGAGGGATAGTCAAGACAGCGTGGCCACAAGCCTTGCAGAGAAGTGGA
TCGAGGCTAGCTGCTGCAAGTACAAAGCTGATTTTGATCTGTATGCTTCCATTATCAAGA
ATCTTGCTTCCACACCTCTAAGATCAAAAGAAGACGCGGCCCCTAAAGAGCAAAATGGAT
TGATGTACTTGGAAAACGGTCCATGAACCGATTTACAAATTGGACTTGTAAAAGCTAGAA
AAAGGCTAGAGATTGATTGTCAGACATAGTTGAGGTTTAGGGGATTATCTTCCCTGATAC
AATTTGGTTAAGAAAATTATGCAAGGTCATATTTTTCTTATTGCAAATACCATTAACGTG
AGTATGTTTACTCATGGAAACCC
clustalw multiple alignements is not computed in this case