These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10419#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2282 fasta sequence [GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAAAAGA] [+] EMBL AK099971 [GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATATGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAAT ] [+] EMBL CB669319 [GAGAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATCGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACACCCAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGCCGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACGCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCATCGAGCTGACCGAGGAGAACAAGC ] [+] EMBL CB640895 [ CGTGCCGCCGCGGCGGAGCACGAGACGCCCGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAGCTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACGGAGTCGTGGGCCTCCGCGCTGATCTCCGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCAGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGATAAAGACACTGTCCTAGAAAATGGTATCTCTATCTCCAATGGCCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGAT ] [+] EMBL AK058581 [ AGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATTTGAATGGATCATATGACTGGAGCATAATGAAGGAAATGGTGTTCAGCCTGACTGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTCAAAAATTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGATCTACTGCATGGTAAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAACCAGACACTGTGAATAATAATACAGAGAATTTGGATGGAGAGGAATCATTTGGTAACATGAATGGTGGATGTGACATAAAAAGTCCGAAATCATCATCTGCTCCAGACATACAAACTGAAGCACTGGAAGAATCAATTCAGTCGGTAGAAGGCCGAAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGAGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAAT ] [-] EMBL CB669320 [ GAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGCATTTAGCATCAAGTTCAGAGATATCAGCAGCGGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCGGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGGTCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTTGTTCTTGTTCAAAAAAAAGA] [-] EMBL CA762879 [ AGGCAATCTAGACAGCCCAAGGTCCACCTCCAGACCAAGCTTATTTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTCTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTCGAAGAGGAATTAACACAAACCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGATCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGACAAATTTTCTTTTTGTATTTAAGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAAAAaa] [+] EMBL BI805161 [ ATCCCAAGAGATTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGCAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAGATCATGCTGCTGATCTGGTGGATGCACTGTGCTGGTAAAAGCTTGCAAAATCTAGTAGCGCTCCACCACTATGCTGTCACTGGAGATTTCGACTTTGAACGAACGAGCTTGTTCTGTTTGTTGAGCATTCCTGTTCCTTAGGGTGCAACCTTTTTGGACACGTATTCTGTCACAGAGACTGATGACTTGTGGTAAGAGACTCTGAGCACATGATCTGTATCGGTTTTCCTTGACATGGAC AATTTTCTTTTTGTATTTATGGCCTCCATGGTTGTGTAAATGTTAATTTAATAAGTTAAAAATTCGTTCTTGTTCAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||