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Oryza sativa
cluster # 10432 cluster # 10432       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10432#0 length = 2279 sequences # 6  
consensus_10432#1 length = 803 sequences # 1  

consensusID : consensus_10432#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2279
fasta sequence
                              [TAAAAATAAAATTGTAAAGAGTTTATTTTTAAAATATTAAAATAAAATGGTTTAAATAATAAAAAAAGTTCGTAGTATGCTACACACTTGCTTCTTCTGAGGACCATAGTTCCCTCCTGGACTGCCCAAAGGATCTTATCGTGGGATGTACTATGAATAGCTAGAGAACATAAGATGTTTGAGTCCAATGCTATATGGACACATGAAGTAAACTACCAACTCAACATCATGTTAACATCTATTTTGCCATATTGGTTTTGTGTTTCTTTCTTCGTTTGGTAGGGCAATGGGCTCAAATATTCCAGGAAATAACATCGTGGGGAAACAGATGGTTTTTGTCTCAGAGATTGAAGAGAAAAATGGCAAGAGTAAAGTTTAGAAGAACTTGTCATGTAGATCCGCATTAATCAAATTTGGGAGATCCCACATAACGTCAACTGCTCCAAAATATAGAAAGACTACTAAACTAAAACAAGTTTCTAGATACAACACAGTTTAATGTTAACCTTCCAGAGTTGCTAGGTCTTTCTTCATTACGAAAAAGTAACTTTTTTTGCATTTGCATTTAAAAGTACTGTGTACTTCAGTAACAAGGTAGCTTATCATTCATCATTCAACAAGCTATGCTTATCGCTTTAGATTAGAAGCACTAAGATAGGTAATCACTCAGGAATCAACAAGGTATGCCAATTACATTGGACGCACTGCAAATGCTTCCACGGTAGCTGAATTGTTTTATTACTTGGTCTTATCCATGCAGGTATAGTACCTTTTGCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGTCAAATTGTTTTGGCTATGGAATTCAAAGGAATGCTAGAATAAGTCTTTTGTGTCAGAGTAGGGTACAAGAAAATCAGAAGGCTTGCTCGCTAACCCACACATAACCCTGAGTGATATGACACAAAGGAAGCAAAAGAAGCGTGCGAGTTCTTGGAATCTTTTCTTGCATATGGTGCCAACATGAAAATCCACTTAAATCATTGAATTCTGAGGCACAATTCGCTAGTTCGGATGTTTGGTTTCCCATGTAAGGAATCTTACCAACTGAGGGCACAGTTAAGAAAAATCTTGTGCAGCAGGAACTTCAGATTGCTCCAGTTTCATGATTCATGGGTATATAAATTTGTGCAGCTCAGAGACCAAATGTTCTGAATCTGCATCAGTGCGCATACTTAGAAAAAGGACAATATGCTCTTATCTGCTCAATCGTATCTCCAATGATTAAGTTGAAGCATGAGGTTTCTCCTGGTCTTGTCAAATGATGAGGGCAACTACCGGTTGCGCATGTCAAATACACCATATGTGCACTTTTATGCTGTATATACTGGAAAGATCACCCTTGCCGTACGAGGATTCAGCTTACAAGGTCAACATTTGTGGCTACAGCCTTTTCGTTTCTTTGGTCACGTTGCTATGATTTGCCATGCCCTGTGGCCTGCAATGATCTACCTCTTGTGGAGGGCATGCTGCCTCACATCACATGGACATCCAATCCAATACCTGTATGCATGGTGCAAAATGCTTGCCAAGAAGTTGCCAGGTGCATGCGTGCTTGCTCCGGGTGACACAAGATGTCACCCCCCCATTTTTTTCCCCTCTTTTTTAGTCCTTATCCATGTTGCTTTCATGTATGTGTAGGCCTCCTTTCTTCGTTGCTGTAGACCTTTGCTTTTGCCTTTTGGCTATCCTTTGTGTAATGGATCATATACAGAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTGTGGACTGATCTGTTCTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAGAAATTTGTTTTGGGAAAATATTCTCAAGATGCCCCAGCCCAGTGAATATATGTTATTCTTGAATT]

[+] EMBL AK072004             [TAAAAATAAAATTGTAAAGAGTTTATTTTTAAAATATTAAAATAAAATGGTTTAAATAATAAAAAAAGTTCGTAGTATGCTACACACTTGCTTCTTCTGAGGACCATAGTTCCCTCCTGGACTGCCCAAAGGATCTTATCGTGGGATGTACTATGAATAGCTAGAGAACATAAGATGTTTGAGTCCAATGCTATATGGACACATGAAGTAAACTACCAACTCAACATCATGTTAACATCTATTTTGCCATATTGGTTTTGTGTTTCTTTCTTCGTTTGGTAGGGCAATGGGCTCAAATATTCCAGGAAATAACATCGTGGGGAAACAGATGGTTTTTGTCTCAGAGATTGAAGAGAAAAATGGCAAGAGTAAAGTTTAGAAGAACTTGTCATGTAGATCCGCATTAATCAAATTTGGGAGATCCCACATAACGTCAACTGCTCCAAAATATAGAAAGACTACTAAACTAAAACAAGTTTCTAGATACAACACAGTTTAATGTTAACCTTCCAGAGTTGCTAGGTCTTTCTTCATTACGAAAAAGTAACTTTTTTTGCATTTGCATTTAAAAGTACTGTGTACTTCAGTAACAAGGTAGCTTATCATTCATCATTCAACAAGCTATGCTTATCGCTTTAGATTAGAAGCACTAAGATAGGTAATCACTCAGGAATCAACAAGGTATGCCAATTACATTGGACGCACTGCAAATGCTTCCACGGTAGCTGAATTGTTTTATTACTTGGTCTTATCCATGCAGGTATAGTACCTTTTGCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGTCAAATTGTTTTGGCTATGGAATTCAAAGGAATGCTAGAATAAGTCTTTTGTGTCAGAGTAGGGTACAAGAAAATCAGAAGGCTTGCTCGCTAACCCACACATAACCCTGAGTGATATGACACAAAGGAAGCAAAAGAAGCGTGCGAGTTCTTGGAATCTTTTCTTGCATATGGTGCCAACATGAAAATCCACTTAAATCATTGAATTCTGAGGCACAATTCGCTAGTTCGGATGTTTGGTTTCCCATGTAAGGAATCTTACCAACTGAGGGCACAGTTAAGAAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF324918             [                                                                                           TTCTTCTGAGGACCATAGTTCCCTCCTGGACTGCCCAAAGGATCTTATCGTGGGATGTACTATGAATAGCTAGAGAACATAAGATGTTTGAGTCCAATGCTATATGGACACATGAAGTAAACTACCAACTCAACATCATGTTAACATCTATTTTGCCATATTGGTTTTGTGTTTCTTTCTTCGTTTGGTAGGGCAATGGGCTCAAATATTCCAGGAAATAACATCGTGGGGAAACAGATGGTTTTTGTCTCAGAGATTGAAGAGAAAAATGGCAAGAGTAAAGTTTAGAAGAACTTGTCATGTAGATCCGCATTAATCAAATTTGGGAGATCCCACATAACGTCAACTGCTCCAAAATATAGAAAGACTACTAAACTAAAACAAGTTTCTAGATACAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB678155             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACACAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGACAAATTGTTTTGGCTATGGAATTCAAAGGAATGCTAGAATAAGTCTTTTGTGTCAGAGTAGGGTACAAGAAAATCAGAAGGCTTGCTCGCTAACCCACACATAACCCTGAGTGATATGACACAAAGGAAGCAAAAGAAGCGTGCGAGTTCTTGGAATCTTTTCTTGCATATGGTGCCAACATGAAAATCCACTTAAATCATTGAATTCTGAGGCACAATTCGCTAGTTCGGATGTTTGGTTTCCCATGTAAGGAATCTTACCAACTGAGGGCACAGTTAAGAAAAATCTTGTGCAGCAGGAACTTCAGATTGCTCCAGTTTCATGATTCATGGGTATATAAATTTGTGCAGCTCAGAGACCAAATGTTCTGAATCTGCATCAGTGCGCATACTTAGAAAAAGGACAATATGCTCTTATCTGCTCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB666786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCATACTTAGAAAAAGGACAATATGCTCTTATCTGCTCAATCGTATCTCCAATGATTAAGTTGAAGCATGAGGTTTCTCCTGGTCTTGTCAAATGATGAGGGCAACTACCGGTTGCGCATGTCAAATACACCATATGTGCACTTTTATGCTGTATATACTGGAAAGATCACCCTTGCCGTACGAGGATTCAGCTTACAAGGTCAACATTTGTGGCTACAGCCTTTTCGTTTCTTTGGTCACGTTGCTATGATTTGCCATGCCCTGTGGCCTGCAATGATCTACCTCTTGTGGAGGGCATGCTGCCTCACATCACATGGACATCCAATCCAATACCTGTATGCATGGTGCAAAATGCTTGCCAAGAAGTTGCCAGGTGCATGCGTGCTTGCTCCGGGTGACACAAGATGTCACCCCCCCATTTTTTTCCCCTCTTTTTTAGTCCTTATCCATGTTGCTTTCATGTATGTGTAGGCCTCCTTTCTTCGTTGCTGTAGACCTTTGCTTTTGCCTTTTGGCTATCCTTTGTGTAATGGATCATATACAGAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTGTGGACTGATCTGTTCTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAGAAATTTGTTTTGGGAAAATATTCTCAAGATGCCCCAGCCCAGTGAATATATGTTATTCTTGAATT]
[-] EMBL CB637565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctAAATGCTTGCCAAGAAGTTGCCAGGTGCATGCGTGCTTGCTCCGGGTAACACAAGATGTCACCCCCCCATTTTTTTCCCCTCTTTTTTAGTCCTTATCCATGTTGCTTTCATGTATGTGTAGGCCTCCTTTCTTCGTTGCTGTAGACCTTAGCTTTTGCCTTTTGGCTATCCTTTGTGTAATGGATCATAAAAAAAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTGTGGACTGATCTGTTTTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAGAAATTTGTTTTGGGAAAA ATTCTCAAGATGCC                                ]
[+] EMBL BI812766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATCCATGTTGCTTTCATGTATGTGTAGGCCTCCTTTCTTCGTTGCTGTAGACCTTTGCTTTTGCCTTTTGGCTATCCTTTGTGTAATGGATCATATACAGAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTGTGGACTGATCTGTTCTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAGAAATTTGTTTTGGGAAAATAaaaaaaaaa                                    ]


>consensus_10432#0 TAAAAATAAAATTGTAAAGAGTTTATTTTTAAAATATTAAAATAAAATGGTTTAAATAAT AAAAAAAGTTCGTAGTATGCTACACACTTGCTTCTTCTGAGGACCATAGTTCCCTCCTGG ACTGCCCAAAGGATCTTATCGTGGGATGTACTATGAATAGCTAGAGAACATAAGATGTTT GAGTCCAATGCTATATGGACACATGAAGTAAACTACCAACTCAACATCATGTTAACATCT ATTTTGCCATATTGGTTTTGTGTTTCTTTCTTCGTTTGGTAGGGCAATGGGCTCAAATAT TCCAGGAAATAACATCGTGGGGAAACAGATGGTTTTTGTCTCAGAGATTGAAGAGAAAAA TGGCAAGAGTAAAGTTTAGAAGAACTTGTCATGTAGATCCGCATTAATCAAATTTGGGAG ATCCCACATAACGTCAACTGCTCCAAAATATAGAAAGACTACTAAACTAAAACAAGTTTC TAGATACAACACAGTTTAATGTTAACCTTCCAGAGTTGCTAGGTCTTTCTTCATTACGAA AAAGTAACTTTTTTTGCATTTGCATTTAAAAGTACTGTGTACTTCAGTAACAAGGTAGCT TATCATTCATCATTCAACAAGCTATGCTTATCGCTTTAGATTAGAAGCACTAAGATAGGT AATCACTCAGGAATCAACAAGGTATGCCAATTACATTGGACGCACTGCAAATGCTTCCAC GGTAGCTGAATTGTTTTATTACTTGGTCTTATCCATGCAGGTATAGTACCTTTTGCAGCT ATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGAC TTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATA AGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTC TGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCC CAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTG ATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGT TACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGTCAAATTGTTTTGGCTAT GGAATTCAAAGGAATGCTAGAATAAGTCTTTTGTGTCAGAGTAGGGTACAAGAAAATCAG AAGGCTTGCTCGCTAACCCACACATAACCCTGAGTGATATGACACAAAGGAAGCAAAAGA AGCGTGCGAGTTCTTGGAATCTTTTCTTGCATATGGTGCCAACATGAAAATCCACTTAAA TCATTGAATTCTGAGGCACAATTCGCTAGTTCGGATGTTTGGTTTCCCATGTAAGGAATC TTACCAACTGAGGGCACAGTTAAGAAAAATCTTGTGCAGCAGGAACTTCAGATTGCTCCA GTTTCATGATTCATGGGTATATAAATTTGTGCAGCTCAGAGACCAAATGTTCTGAATCTG CATCAGTGCGCATACTTAGAAAAAGGACAATATGCTCTTATCTGCTCAATCGTATCTCCA ATGATTAAGTTGAAGCATGAGGTTTCTCCTGGTCTTGTCAAATGATGAGGGCAACTACCG GTTGCGCATGTCAAATACACCATATGTGCACTTTTATGCTGTATATACTGGAAAGATCAC CCTTGCCGTACGAGGATTCAGCTTACAAGGTCAACATTTGTGGCTACAGCCTTTTCGTTT CTTTGGTCACGTTGCTATGATTTGCCATGCCCTGTGGCCTGCAATGATCTACCTCTTGTG GAGGGCATGCTGCCTCACATCACATGGACATCCAATCCAATACCTGTATGCATGGTGCAA AATGCTTGCCAAGAAGTTGCCAGGTGCATGCGTGCTTGCTCCGGGTGACACAAGATGTCA CCCCCCCATTTTTTTCCCCTCTTTTTTAGTCCTTATCCATGTTGCTTTCATGTATGTGTA GGCCTCCTTTCTTCGTTGCTGTAGACCTTTGCTTTTGCCTTTTGGCTATCCTTTGTGTAA TGGATCATATACAGAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTGTGGACT GATCTGTTCTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAGAAATTT GTTTTGGGAAAATATTCTCAAGATGCCCCAGCCCAGTGAATATATGTTATTCTTGAATT



consensusID : consensus_10432#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 803
fasta sequence
                              [ATATTAATAATTCCTATTGTAATTTTTCAAGTTCTTCTGTGTATGCGCCTAGAGGGCACTCCATCTAACGCAAAATTTTTCCCACTCCGAGCTGTTTTCTTACCTATACTTTTGCTTCAAGTGACTACTGTATCGTTTGCTATTTGGATATTCTTTGAAAGGCTTGTTACAAAATTACGAGCTAAAAAGATCACTGACGGATATATTTCTTTCTCATCAAAGATTGATGAATTGTTTATGATGATGCAACATGGTTCAAGGCTCATCGCTTGGTGGTCTATTGATGAAGATAGCAAAGAGGAGCAAGCTCATTTATGCTATGCAAATAATTCTGGGTATAGTACCTTTTGCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGACAAATTGTTTTGGCTATGGAATTCAAAGGAATGCTAGAATAAGTC]

[+] EMBL CB666785             [ATATTAATAATTCCTATTGTAATTTTTCAAGTTCTTCTGTGTATGCGCCTAGAGGGCACTCCATCTAACGCAAAATTTTTCCCACTCCGAGCTGTTTTCTTACCTATACTTTTGCTTCAAGTGACTACTGTATCGTTTGCTATTTGGATATTCTTTGAAAGGCTTGTTACAAAATTACGAGCTAAAAAGATCACTGACGGATATATTTCTTTCTCATCAAAGATTGATGAATTGTTTATGATGATGCAACATGGTTCAAGGCTCATCGCTTGGTGGTCTATTGATGAAGATAGCAAAGAGGAGCAAGCTCATTTATGCTATGCAAATAATTCTGGGTATAGTACCTTTTGCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGACAAATTGTTTTGGCTATGGAATTCAAAGGAATGCTAGAATAAGTC]


>consensus_10432#1 ATATTAATAATTCCTATTGTAATTTTTCAAGTTCTTCTGTGTATGCGCCTAGAGGGCACT CCATCTAACGCAAAATTTTTCCCACTCCGAGCTGTTTTCTTACCTATACTTTTGCTTCAA GTGACTACTGTATCGTTTGCTATTTGGATATTCTTTGAAAGGCTTGTTACAAAATTACGA GCTAAAAAGATCACTGACGGATATATTTCTTTCTCATCAAAGATTGATGAATTGTTTATG ATGATGCAACATGGTTCAAGGCTCATCGCTTGGTGGTCTATTGATGAAGATAGCAAAGAG GAGCAAGCTCATTTATGCTATGCAAATAATTCTGGGTATAGTACCTTTTGCAGCTATCCA CCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTACAGAGACTTCAA TTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGTGTGATAAGCTA AAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCATAGTTCTGCTT CCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGTCATGCCCAATT TGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTTCAGCTGATTCA ATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAATTTATGTTACCT ACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGACAAATTGTTTTGGCTATGGAAT TCAAAGGAATGCTAGAATAAGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10432#0      TAAAAATAAAATTGTAAAGAGTTTATTTTTAAAATATTAAAATAAAATGGTTTAAATAAT 60
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      AAAAAAAGTTCGTAGTATGCTACACACTTGCTTCTTCTGAGGACCATAGTTCCCTCCTGG 120
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      ACTGCCCAAAGGATCTTATCGTGGGATGTACTATGAATAGCTAGAGAACATAAGATGTTT 180
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GAGTCCAATGCTATATGGACACATGAAGTAAACTACCAACTCAACATCATGTTAACATCT 240
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      ATTTTGCCATATTGGTTTTGTGTTTCTTTCTTCGTTTGGTAGGGCAATGGGCTCAAATAT 300
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TCCAGGAAATAACATCGTGGGGAAACAGATGGTTTTTGTCTCAGAGATTGAAGAGAAAAA 360
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TGGCAAGAGTAAAGTTTAGAAGAACTTGTCATGTAGATCCGCATTAATCAAATTTGGGAG 420
consensus_10432#1      ---------------------------------------------------ATATTAATA 9
                                                                          ** *     

consensus_10432#0      ATCCCACATAACGTCAACTGCTCCAAAATATAGAAAGACTACTAAACTAAAACAAGTTTC 480
consensus_10432#1      ATTCC---TATTGTAATTT--TTCAAGTTCTTCTGTGTATGC--GCCTAGAGGGCACTCC 62
                       ** **   **  ** *  *  * ***  * *     *  * *    *** *      * *

consensus_10432#0      TAGATACAACACAGTTTAATGTTAACCTTCCAGAGTTGCTAGGTCTTTCTTCATTACGAA 540
consensus_10432#1      ---ATCTAACGCAA---AATTTTTCCCACTCCGAGCTGTTTTCTTACCTATACTTTTGCT 116
                          **  *** **    *** **  **   * *** ** *   *      *  **  *  

consensus_10432#0      A-AAGTAACTTTTTTTGCATTTGC-ATTTAAAAGTACTGTGTACTTCA-GTAACAAGGTA 597
consensus_10432#1      TCAAGTGACTACTGTATCGTTTGCTATTTGGATATTCTTTGAAAGGCTTGTTACAAAATT 176
                         **** ***  * *  * ***** ****  *  * ** ** *   *  ** ****  * 

consensus_10432#0      GCTTATCATTCATCATTCAACAAGCTATGCTTATCGCTTTAGATTAGAAGCACTAAGATA 657
consensus_10432#1      ACGAGCTAAAAAGATCACTGACGGATATATTTCTTTCTC---ATCAAAGAT----TGATG 229
                        *     *   *     *     * ***  ** *  **    ** * *        *** 

consensus_10432#0      GGTAATCACTCAGGAATCAACAAGGTATGCCAATTA-CATTGGACGCACTGCAAATGCTT 716
consensus_10432#1      AATTGTTTATGATGATGCAACATGGTTCAAGGCTCATCGCTTGGTGGTCTATTGATGAAG 289
                         *  *   * * **  ***** ***       * * *  * *  *  **    ***   

consensus_10432#0      CCACGGTAGCTGAATTGTTTTATTACT--TGGTCTTATCCATGCAGGTATAGTACCTTTT 774
consensus_10432#1      ATAGCAAAGAGGAGCAAGCTCATTTATGCTATGCAAATAATTCTGGGTATAGTACCTTTT 349
                         *    **  **      * ***  *  *   *  **   *   ***************

consensus_10432#0      GCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTAC 834
consensus_10432#1      GCAGCTATCCACCAGAGATGGTAAAAGAGATGCCGAAGAAAGTTCTTGTCAAAGAGGTAC 409
                       ************************************************************

consensus_10432#0      AGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGT 894
consensus_10432#1      AGAGACTTCAATTAGCTTTGGGGGAGCAAACCAAAATGGCTAAGCTTAGTCAACAGCAGT 469
                       ************************************************************

consensus_10432#0      GTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCA 954
consensus_10432#1      GTGATAAGCTAAAAAATGAACAGATCCTATGTCGGATATGCTTTGAGAGAGACATTTGCA 529
                       ************************************************************

consensus_10432#0      TAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGT 1014
consensus_10432#1      TAGTTCTGCTTCCATGCCGCCATTATGTTCTTTGCGAAGCGTGCTCTGATAAGTGCCGGT 589
                       ************************************************************

consensus_10432#0      CATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTT 1074
consensus_10432#1      CATGCCCAATTTGTCGAGTGAGTATTGAGAACAAGCTACCTGTTTGTGATGCTATGAGTT 649
                       ************************************************************

consensus_10432#0      CAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAAT 1134
consensus_10432#1      CAGCTGATTCAATAAGTGATACAGTCTAGATGTTCACATGTCGACCACAGTTCTAGGAAT 709
                       ************************************************************

consensus_10432#0      TTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGTCAAATTGTTTT 1194
consensus_10432#1      TTATGTTACCTACTTCTCGAGCCAGCGAAGATGACCACAGAGAGGAAGACAAATTGTTTT 769
                       ************************************************ ***********

consensus_10432#0      GGCTATGGAATTCAAAGGAATGCTAGAATAAGTCTTTTGTGTCAGAGTAGGGTACAAGAA 1254
consensus_10432#1      GGCTATGGAATTCAAAGGAATGCTAGAATAAGTC-------------------------- 803
                       **********************************                          

consensus_10432#0      AATCAGAAGGCTTGCTCGCTAACCCACACATAACCCTGAGTGATATGACACAAAGGAAGC 1314
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      AAAAGAAGCGTGCGAGTTCTTGGAATCTTTTCTTGCATATGGTGCCAACATGAAAATCCA 1374
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      CTTAAATCATTGAATTCTGAGGCACAATTCGCTAGTTCGGATGTTTGGTTTCCCATGTAA 1434
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GGAATCTTACCAACTGAGGGCACAGTTAAGAAAAATCTTGTGCAGCAGGAACTTCAGATT 1494
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GCTCCAGTTTCATGATTCATGGGTATATAAATTTGTGCAGCTCAGAGACCAAATGTTCTG 1554
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      AATCTGCATCAGTGCGCATACTTAGAAAAAGGACAATATGCTCTTATCTGCTCAATCGTA 1614
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TCTCCAATGATTAAGTTGAAGCATGAGGTTTCTCCTGGTCTTGTCAAATGATGAGGGCAA 1674
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      CTACCGGTTGCGCATGTCAAATACACCATATGTGCACTTTTATGCTGTATATACTGGAAA 1734
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GATCACCCTTGCCGTACGAGGATTCAGCTTACAAGGTCAACATTTGTGGCTACAGCCTTT 1794
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TCGTTTCTTTGGTCACGTTGCTATGATTTGCCATGCCCTGTGGCCTGCAATGATCTACCT 1854
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      CTTGTGGAGGGCATGCTGCCTCACATCACATGGACATCCAATCCAATACCTGTATGCATG 1914
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GTGCAAAATGCTTGCCAAGAAGTTGCCAGGTGCATGCGTGCTTGCTCCGGGTGACACAAG 1974
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      ATGTCACCCCCCCATTTTTTTCCCCTCTTTTTTAGTCCTTATCCATGTTGCTTTCATGTA 2034
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TGTGTAGGCCTCCTTTCTTCGTTGCTGTAGACCTTTGCTTTTGCCTTTTGGCTATCCTTT 2094
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GTGTAATGGATCATATACAGAATTGTGACGGCAAGAATTTTGGCAGCATCGATCAACCTG 2154
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      TGGACTGATCTGTTCTGCTGAGCATTCAGCCACACATGTCCATTTTTGTTTAGGCAAGAG 2214
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      AAATTTGTTTTGGGAAAATATTCTCAAGATGCCCCAGCCCAGTGAATATATGTTATTCTT 2274
consensus_10432#1      ------------------------------------------------------------
                                                                                   

consensus_10432#0      GAATT 2279
consensus_10432#1      -----
                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)