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Oryza sativa
cluster # 10438 cluster # 10438       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10438#0 length = 1202 sequences # 2  
consensus_10438#1 length = 1189 sequences # 4  
consensus_10438#2 length = 439 sequences # 1  

consensusID : consensus_10438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1202
fasta sequence
                              [CCTTGCCTTGCTTGCCTCTCATCAGACGATTGATCGACAAGAGAGAGAAAGAGCTTGCGTCGCAATGACCGCCGTCGACTTGATGCCTGCAGCTGACGACGACAACAACAAGCAGTCATCCACCGGCCTCCTCCACCACCACCAGCTCCCCGCCGCCGCCGACAACGCCATACTACACAATACCAGGCGGCTGGAGGGGAAGGTGGCCATCGTCACCGGCGGCTCGCGTGGCATCGGCGAAGCCATC-GTAAGGGCCTTCGTTCACCACGGCGCTCTCGTCGTCGTCGCCGACATCGACGACGCCGGGGGCCACGCGCTGGCCGCCGCGCTCGGCCCGCACGCCTGCACCTACGTCCACTGCGACGTGGCCGAGGAGGCCGACGTGGAACGCGCCGTCGCCACCACGCTGGAGCAGCACGGCCGCCTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGGCGCCAAGAGCATCGCGTCCCTCGACGCCGCCGAGTTCGCCCGCGTGCTGCGCGTCAACGCGCTGGGCGCCGCCCTCGGAATGAAGCACGCGGCGCGTGCCATGGTGCCCCGCCGCTCCGGGAGCATCGTGTCGGTGGCGAGCGTGGCGGGCGTGCTGGGCGGCCTCGGCCCGCACGCGTACACGGCCTCCAAGCACGCCCTAGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGGGAGCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTGGCGACGCCGATGCTGGTGAACGCGTGGCGGCAGGGGCAGGGAGGAGATCACGCGGATGAGGATCAGGCGGCGGCGAGCGAGGAGGAGGAGGTGGAGAAGATGGAGGAGATGGTGCGGAGGCTGGCGACGCTCAAGGGGCCGACGCTGCGGGCAGGCGACATCGCGGAGGCGGCGGTGTTCCTGGCCAGCGACGAGTCCAGGTACGTGTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACGTCATCGGCCTCTGAATTGAATCTCTCTCTCTCTCTCTTAGCTAATTACTATTTCAGTTATATATATATATATATATATATAAGTCCGTGACCGTCCTCATCGATCATATGATGATCGATGGATGTACTCCCGCATGCTCGACTGTGCTGTCTGAAATCTGATGACTGAATTCCAGCACTTGCGCATTGTTGA]

[+] EMBL AK070356             [CCTTGCCTTGCTTGCCTCTCATCAGACGATTGATCGACAAGAGAGAGAAAGAGCTTGCGTCGCAATGACCGCCGTCGACTTGATGCCTGCAGCTGACGACGACAACAACAAGCAGTCATCCACCGGCCTCCTCCACCACCACCAGCTCCCCGCCGCCGCCGACAACGCCATACTACACAATACCAGGCGGCTGGAGGGGAAGGTGGCCATCGTCACCGGCGGCTCGCGTGGCATCGGCGAAGCCATC GTAAGGGCCTTCGTTCACCACGGCGCTCTCGTCGTCGTCGCCGACATCGACGACGCCGGGGGCCACGCGCTGGCCGCCGCGCTCGGCCCGCACGCCTGCACCTACGTCCACTGCGACGTGGCCGAGGAGGCCGACGTGGAACGCGCCGTCGCCACCACGCTGGAGCAGCACGGCCGCCTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGGCGCCAAGAGCATCGCGTCCCTCGACGCCGCCGAGTTCGCCCGCGTGCTGCGCGTCAACGCGCTGGGCGCCGCCCTCGGAATGAAGCACGCGGCGCGTGCCATGGTGCCCCGCCGCTCCGGGAGCATCGTGTCGGTGGCGAGCGTGGCGGGCGTGCTGGGCGGCCTCGGCCCGCACGCGTACACGGCCTCCAAGCACGCCCTAGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGGGAGCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTGGCGACGCCGATGCTGGTGAACGCGTGGCGGCAGGGGCAGGGAGGAGATCACGCGGATGAGGATCAGGCGGCGGCGAGCGAGGAGGAGGAGGTGGAGAAGATGGAGGAGATGGTGCGGAGGCTGGCGACGCTCAAGGGGCCGACGCTGCGGGCAGGCGACATCGCGGAGGCGGCGGTGTTCCTGGCCAGCGACGAGTCCAGGTACGTGTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACGTCATCGGCCTCTGAATTGAATCTCTCTCTCTCTCTCTTAGCTAATTACTATTTCAGTTATATATATATATATATATATATAAGTCCGTGACCGTCCTCATCGATCATATGATGATCGATGGATGTACTCCCGCATGCTCGACTGTGCTGTCTGAAATCTGATGACTGAATTCCAGCACTTGCGCATTGTTGA]
[+] EMBL OSC135               [                                                     CTTGCGTCGCAATNACCGCCGTCGACTTGATNCCTGCAGCTGACNACGACAACAACAAGCAGTCATCCACCGGCCTCCTCCACNACCACCAGCTCCCNNCCGCCGCCGACAACGCCATACTACACAATACCANGCGGCTGGAGGGGAAGGTNGCCATCGTCACCNGCNGCTCGCGTNGCATCGGCGAA  NATCNGTAAGGGCCTTCGTTCACNACGGCGCTNTCGTCGTCGTCGCCGACATCGACGACGCCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_10438#0 CCTTGCCTTGCTTGCCTCTCATCAGACGATTGATCGACAAGAGAGAGAAAGAGCTTGCGT CGCAATGACCGCCGTCGACTTGATGCCTGCAGCTGACGACGACAACAACAAGCAGTCATC CACCGGCCTCCTCCACCACCACCAGCTCCCCGCCGCCGCCGACAACGCCATACTACACAA TACCAGGCGGCTGGAGGGGAAGGTGGCCATCGTCACCGGCGGCTCGCGTGGCATCGGCGA AGCCATCGTAAGGGCCTTCGTTCACCACGGCGCTCTCGTCGTCGTCGCCGACATCGACGA CGCCGGGGGCCACGCGCTGGCCGCCGCGCTCGGCCCGCACGCCTGCACCTACGTCCACTG CGACGTGGCCGAGGAGGCCGACGTGGAACGCGCCGTCGCCACCACGCTGGAGCAGCACGG CCGCCTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGGCGCCAA GAGCATCGCGTCCCTCGACGCCGCCGAGTTCGCCCGCGTGCTGCGCGTCAACGCGCTGGG CGCCGCCCTCGGAATGAAGCACGCGGCGCGTGCCATGGTGCCCCGCCGCTCCGGGAGCAT CGTGTCGGTGGCGAGCGTGGCGGGCGTGCTGGGCGGCCTCGGCCCGCACGCGTACACGGC CTCCAAGCACGCCCTAGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGGGAGCACGG CATCCGCGTCAACTGCATCTCCCCCTTCGGCGTGGCGACGCCGATGCTGGTGAACGCGTG GCGGCAGGGGCAGGGAGGAGATCACGCGGATGAGGATCAGGCGGCGGCGAGCGAGGAGGA GGAGGTGGAGAAGATGGAGGAGATGGTGCGGAGGCTGGCGACGCTCAAGGGGCCGACGCT GCGGGCAGGCGACATCGCGGAGGCGGCGGTGTTCCTGGCCAGCGACGAGTCCAGGTACGT GTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACGTCATCGGCCT CTGAATTGAATCTCTCTCTCTCTCTCTTAGCTAATTACTATTTCAGTTATATATATATAT ATATATATATAAGTCCGTGACCGTCCTCATCGATCATATGATGATCGATGGATGTACTCC CGCATGCTCGACTGTGCTGTCTGAAATCTGATGACTGAATTCCAGCACTTGCGCATTGTT GA



consensusID : consensus_10438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1189
fasta sequence
                              [TATCACTTGCTAGGACAGGGTCGTACATGCACACTACCCTCGCCTCCTACGCCCAGGATCTCGCCATGCCTGCCGCCGCACTCGACCTCCTCCCTGACAAGGCGCACCAGCCGTCCATGGCGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCATGCCCAAGAGGCTGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCGGGGAGGCGATCGTGAGGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACGACGCGGCGGGCG-AGGCGCTGGC-GGCGGCGCT--GGGGCCGCACGTCGGGTTCGTGCGGTGCGACGTGTCGGTGG-AGGAGGACGTGGAGCGCGCCGTCG-AGCGCGCCGTGGCGCGGT-ACGGGCGGTTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGCCGCCAAGAGCATCCTGTCGTTCGACGCCGGGGAGTTCGACCGCGTGCTCCGCGTCAACGCGCTGGGCGCCGCGCTCGGCATGAAGCACGCGGCGCTCGCCATGACCCAGCGCCGCGCCGGCAGCATCATCTCCGTCGCCAGCGTCGCCGGCGTGCTCGGCGGCCTCGGCCCGCACGCCTACACCGCCTCCAAGCACGCCATCGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGCGCCCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCTGGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACATCGCCGTGCCCAGCGACCAGGAGGTGGAGAAGATGGAGGAGGTGGTCAGGGGCCTCGCCACGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTCTTCCTCGCCAGCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGAACACAACTAAAAAGGATTTGTTAATGTGACGCAACGCAAGTGTACTCAGCTTCATCCCATTTTGTTAATCTCTTGATTCAATGTGTTAATTGGANTTGTGCAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK100767             [TATCACTTGCTAGGACAGGGTCGTACATGCACACTACCCTCGCCTCCTACGCCCAGGATCTCGCCATGCCTGCCGCCGCACTCGACCTCCTCCCTGACAAGGCGCACCAGCCGTCCATGGCGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCATGCCCAAGAGGCTGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCGGGGAGGCGATCGTGAGGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACGACGCGGCGGGCG AGGCGCTGGC GGCGGCGCT  GGGGCCGCACGTCGGGTTCGTGCGGTGCGACGTGTCGGTGG AGGAGGACGTGGAGCGCGCCGTCG AGCGCGCCGTGGCGCGGT ACGGGCGGTTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGCCGCCAAGAGCATCCTGTCGTTCGACGCCGGGGAGTTCGACCGCGTGCTCCGCGTCAACGCGCTGGGCGCCGCGCTCGGCATGAAGCACGCGGCGCTCGCCATGACCCAGCGCCGCGCCGGCAGCATCATCTCCGTCGCCAGCGTCGCCGGCGTGCTCGGCGGCCTCGGCCCGCACGCCTACACCGCCTCCAAGCACGCCATCGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGCGCCCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCTGGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACATCGCCGTGCCCAGCGACCAGGAGGTGGAGAAGATGGAGGAGGTGGTCAGGGGCCTCGCCACGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTCTTCCTCGCCAGCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGAACACAACTAAAAAGGATTTGTTAATGTGACGCAACGCAAGTGTACTCAGCTTCATCCCATTTTGTTAATCTCTTGATTCAATGTGTTAATT                                 ]
[+] EMBL C72142               [              ACAGGGTCGTACATNCACACTACCCTCGCCTCCTACGCCCAGGATCTCGCCATGCCTGCCGCCGCACTCGACCTCCTCCCTGACAAGGCGCACCAGCCGTCCATGGCGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCATGCCCAAGAGGCTGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCNGGGAGGCGATCGTGAGGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACNNCGCGGCGGGCGAAGGTGCTTGCNTGCGGCGCTTGGGGGCTGTACnttc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C72715               [                                     CCTCGCCTCCTACGCCCAGGATCTCGCCATGCCTGCCGCCGCACTCNACCTCCTCCCTGACAAGGCGCACCAGCCGTCCATGGCGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCATGCCCAAGAGGCTGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCGGGGAGGCGATCGTGAGGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACGACGCGGCGGGCG AGGCGCTGGC GGCGGCGCT  GGGGCCGCACGTCGGGTTCGTGCGGTGCGACGTGTCGGTGGAAGGAGGACGTGGAGCGCGCCGTCGAAGCGCCCCGTTGCG GTTAACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU094051             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATGTGACGCAACGCAAGTGTACTCAGCTTCATCCCATTTTGTTAATCTCTTGATTCAATGTGTTAATTGGANTTGTGCAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10438#1 TATCACTTGCTAGGACAGGGTCGTACATGCACACTACCCTCGCCTCCTACGCCCAGGATC TCGCCATGCCTGCCGCCGCACTCGACCTCCTCCCTGACAAGGCGCACCAGCCGTCCATGG CGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCATGCCCAAGAGGC TGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCGGGGAGGCGATCGTGA GGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACGACGCGGCGGGCG AGGCGCTGGCGGCGGCGCTGGGGCCGCACGTCGGGTTCGTGCGGTGCGACGTGTCGGTGG AGGAGGACGTGGAGCGCGCCGTCGAGCGCGCCGTGGCGCGGTACGGGCGGTTGGACGTGC TGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGCCGCCAAGAGCATCCTGTCGT TCGACGCCGGGGAGTTCGACCGCGTGCTCCGCGTCAACGCGCTGGGCGCCGCGCTCGGCA TGAAGCACGCGGCGCTCGCCATGACCCAGCGCCGCGCCGGCAGCATCATCTCCGTCGCCA GCGTCGCCGGCGTGCTCGGCGGCCTCGGCCCGCACGCCTACACCGCCTCCAAGCACGCCA TCGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGCGCCCACGGCATCCGCGTCAACT GCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCTGGCGCCAGGGCCACG ACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACATCGCCGTGCCCAGCG ACCAGGAGGTGGAGAAGATGGAGGAGGTGGTCAGGGGCCTCGCCACGCTCAAGGGCGCGA CGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTCTTCCTCGCCAGCGACGACTCCAGAT ACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACCTAATTG GCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGAACACAACTAAAAAGG ATTTGTTAATGTGACGCAACGCAAGTGTACTCAGCTTCATCCCATTTTGTTAATCTCTTG ATTCAATGTGTTAATTGGANTTGTGCAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence
                              [CGGCGCCCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCTGGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACATCGCCGTGCCCAGCGACCAGGAGGTGGAGAANATGGAGGAGGTGGTCAGGGGCCTCGCCACGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTNTTCCTCGCCAGCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGAACACAACTAAAAAGGATTTGTTAATGTGACGCAACGCAAGTGTACTCAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU172460             [CGGCGCCCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCTGGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACATCGCCGTGCCCAGCGACCAGGAGGTGGAGAANATGGAGGAGGTGGTCAGGGGCCTCGCCACGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTNTTCCTCGCCAGCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCTCCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGAACACAACTAAAAAGGATTTGTTAATGTGACGCAACGCAAGTGTACTCAAAAAAAAAAAAAAAAAAAAA]


>consensus_10438#2 CGGCGCCCACGGCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCT CATCAACGCCTGGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACAT CGACCTCGACATCGCCGTGCCCAGCGACCAGGAGGTGGAGAANATGGAGGAGGTGGTCAG GGGCCTCGCCACGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCT NTTCCTCGCCAGCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGG CGTCACCACCTCCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGC GATAGTTTAGAACACAACTAAAAAGGATTTGTTAATGTGACGCAACGCAAGTGTACTCAA AAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10438#1      ------------TATCACTTGCTAGGACAGGGTCGTACATGCACACTACCCTCGCCTCCT 48
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      CCTTGCCTTGCTTGCCTCTCATCAGACGATTGATCGACAAG-AGAGAGAAAGAGCTTGCG 59
                                                                                   

consensus_10438#1      ACGCCCAGGATCTCGCCATGCCTGCCGCCGCACTCGACCTCCTCCCTGACAAGGCGCACC 108
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      TCGCAATGACCGCCGTCGACTTGATGCCTGCAGCTGACGACGACAACAACAAGCAGTCAT 119
                                                                                   

consensus_10438#1      AGCCGTCCATGGCGCCGTCGCTCCACGCCTGGGACTCCCCCAATGGCGCCCCCACTCCCA 168
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      CCACCGGCCTCCTCCACCACCACCAGCTCCCCGCCGCCGCCGACAACGCCATACTACACA 179
                                                                                   

consensus_10438#1      TGCCCAAGAGGCTGGAAGGGAAGGTGGCCATTGTCACCGGCGGGGCGAGGGGGATCGGGG 228
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      ATACCAGGCGGCTGGAGGGGAAGGTGGCCATCGTCACCGGCGGCTCGCGTGGCATCGGCG 239
                                                                                   

consensus_10438#1      AGGCGATCGTGAGGCTGTTCGTGAAGCACGGGGCCAAGGTGGTGATCGCGGACATCGACG 288
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      AAGCCATCGTAAGGGCCTTCGTTCACCACGGCGCTCTCGTCGTCGTCGCCGACATCGACG 299
                                                                                   

consensus_10438#1      ACGCGGCGGGCGAGGCGCTGGCGGCGGCGCTGGGGCCGCACGTCGGG---TTCGTGCGGT 345
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      ACGCCGGGGGCCACGCGCTGGCCGCCGCGCTCGGCCCGCACGCCTGCACCTACGTCCACT 359
                                                                                   

consensus_10438#1      GCGACGTGTCGGTGGAGGAGGACGTGGAGCGCGCCGTCGAGCGCGCCGTGGCGCGGTACG 405
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      GCGACGTGGCCGAGGAGGCCGACGTGGAACGCGCCGTCGCCACCACGCTGGAGCAGCACG 419
                                                                                   

consensus_10438#1      GGCGGTTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGCCGCCA 465
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      GCCGCCTGGACGTGCTGTGCAACAACGCCGGGGTGCTGGGCCGCCAGACGCGCGGCGCCA 479
                                                                                   

consensus_10438#1      AGAGCATCCTGTCGTTCGACGCCGGGGAGTTCGACCGCGTGCTCCGCGTCAACGCGCTGG 525
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      AGAGCATCGCGTCCCTCGACGCCGCCGAGTTCGCCCGCGTGCTGCGCGTCAACGCGCTGG 539
                                                                                   

consensus_10438#1      GCGCCGCGCTCGGCATGAAGCACGCGGCGCTCGCCATGACCCAGCGCCGCGCCGGCAGCA 585
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      GCGCCGCCCTCGGAATGAAGCACGCGGCGCGTGCCATGGTGCCCCGCCGCTCCGGGAGCA 599
                                                                                   

consensus_10438#1      TCATCTCCGTCGCCAGCGTCGCCGGCGTGCTCGGCGGCCTCGGCCCGCACGCCTACACCG 645
consensus_10438#2      ------------------------------------------------------------
consensus_10438#0      TCGTGTCGGTGGCGAGCGTGGCGGGCGTGCTGGGCGGCCTCGGCCCGCACGCGTACACGG 659
                                                                                   

consensus_10438#1      CCTCCAAGCACGCCATCGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGCGCCCACG 705
consensus_10438#2      -------------------------------------------------CGGCGCCCACG 11
consensus_10438#0      CCTCCAAGCACGCCCTAGTGGGGCTCACCAAGAACGCCGCCTGCGAGCTCGGGGAGCACG 719
                                                                        *** *  ****

consensus_10438#1      GCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCT 765
consensus_10438#2      GCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTCGCCACCCCGATGCTCATCAACGCCT 71
consensus_10438#0      GCATCCGCGTCAACTGCATCTCCCCCTTCGGCGTGGCGACGCCGATGCTGGTGAACGCGT 779
                       ********************************** ** ** ********  * ***** *

consensus_10438#1      GGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACA 825
consensus_10438#2      GGCGCCAGGGCCACGACGCCTCCACCGCCGACGACGCCGACGCCGACATCGACCTCGACA 131
consensus_10438#0      GGCGGCAGGGGCAGG--------------GAGGAGATC-ACGCGGATGAGGATC---AGG 821
                       **** ***** ** *              ** **   * **** **    ** *   *  

consensus_10438#1      TCGCCGTGCCCAGCGACCAGGAGGTGGAGAAGATGGAGGAGGTGGTCAGGGGCCTCGCCA 885
consensus_10438#2      TCGCCGTGCCCAGCGACCAGGAGGTGGAGAANATGGAGGAGGTGGTCAGGGGCCTCGCCA 191
consensus_10438#0      CGGCGGCGAGCGAGGAGGAGGAGGTGGAGAAGATGGAGGAGATGGTGCGGAGGCTGGCGA 881
                         ** * *  *   **  ************* ********* ****  ** * ** ** *

consensus_10438#1      CGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTCTTCCTCGCCA 945
consensus_10438#2      CGCTCAAGGGCGCGACGCTGAGACCCAGGGACATCGCCGAGGCGGCGCTNTTCCTCGCCA 251
consensus_10438#0      CGCTCAAGGGGCCGACGCTGCGGGCAGGCGACATCGCGGAGGCGGCGGTGTTCCTGGCCA 941
                       **********  ******** *  *  * ******** ********* * ***** ****

consensus_10438#1      GCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCT 1005
consensus_10438#2      GCGACGACTCCAGATACATTTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCT 311
consensus_10438#0      GCGACGAGTCCAGGTACGTGTCCGGCCACAACCTCGTCGTCGACGGCGGCGTCACCACCT 1001
                       ******* ***** *** * ****************************************

consensus_10438#1      CCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGA 1065
consensus_10438#2      CCAGAAACCTAATTGGCCTTTGACTCTTCTTCTCCCTCTAGATGAATGCGATAGTTTAGA 371
consensus_10438#0      CCAGAAACGTCATCGGCCTCTGAAT-TGAATCTCTCTCTCTCTCTCTTAGCTAATTACTA 1060
                       ******** * ** ***** *** * *   **** ****   *   *  * ** **   *

consensus_10438#1      ACACAACTAAAAAGG-ATTTGTTAATGTGACGCAACGCAAGTGTACTCAGCTTCATCCCA 1124
consensus_10438#2      ACACAACTAAAAAGG-ATTTGTTAATGTGACGCAACGCAAGTGTACTCAAAAAAAAAAAA 430
consensus_10438#0      TTTCAGTTATATATATATATATATATATATAAGTCCGTGACCGTCCTCATCGATCATATG 1120
                          **  ** * *   ** * *  ** *       **  *  ** ****           

consensus_10438#1      TTTTGTTAATCTCTTGATTCAATGTGTTAATTGGANTTGTGCAAAAAAAAAAAAAAAAAA 1184
consensus_10438#2      AAAAAAAAA--------------------------------------------------- 439
consensus_10438#0      ATGATCGATGGATGTACTCCCGCATGCTCGACTGTGCTGTCTGAAATCTGATGACTGAAT 1180
                              *                                                    

consensus_10438#1      AAAAA----------------- 1189
consensus_10438#2      ----------------------
consensus_10438#0      TCCAGCACTTGCGCATTGTTGA 1202
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)