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Oryza sativa
cluster # 10440 cluster # 10440       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10440#0 length = 780 sequences # 7  

consensusID : consensus_10440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 780
fasta sequence
                              [CCCAGCCGCGAACTCCTCCGAGTTGGTTGGCCTACGCGCCTATCCAGCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG-GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTGTTGG]

[+] EMBL CB619027             [CCCAGCCGCGAACTCCTCCGAGTTGGTTGGCCTACGCGCCTAGCCAGCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGCGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCGCTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGAC                                                ]
[+] EMBL CB684897             [                              CCTACCCGCCTAGCCAGCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTGTTGG]
[+] EMBL CB685609             [                                     GCCCCTTCAACTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTGGACCCTATGTGGAG                                     ]
[+] EMBL CB685610             [                                     GCCTATCCCTCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGGTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAAGAGCTCGACGCGCCGGAGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCAGAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCATGGCGCAGATATGGGGGGCGCCCAGGCAATGGAGCTGGCCGATC                                                                                                                                                                            ]
[+] EMBL CB685615             [                                     GCCTATCCCTTTA CGACTATGGTCGCGTCCGCCGCCGTCGTGGCATCCACCGCGCCGCCGCATCCGCTGCGGCCGCGCCGGCCCGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGGGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCATCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCCGTGGAGCACCTCGGGCTGCCGACCTTCGCCTACGACCACGGGGGCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGG                                                                                                                                                                                                         ]
[+] EMBL CB685607             [                                     gcctccttAGCTAGCGACAATGGCCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACGAGGACGACGACACCCCATGGGCGGGCGAGATCCACCAGAAGATGCTCAGCTCGCCTGAAGTTGGGATTG                                                   ]
[+] EMBL CB685614             [                                                                          GCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCCCGCCGG GGGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCTCGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGCGGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCACCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGGGGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCCTCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCGACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCGGGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCTGGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAG                                                                                                                                     ]


>consensus_10440#0 CCCAGCCGCGAACTCCTCCGAGTTGGTTGGCCTACGCGCCTATCCAGCTAGCGACAATGG CCGCGTCCGCCGCCGCCGTGGCATCCACCGCGCCGCCGCAGCCGCTGCGGCCGCGCCGGG GGATAGCCGTGCCGTCGTCATACTCACACCGCGCGGCGACGCGGCCGCGCCTCGCCGTCT CGGCGTCCTCCACCACCACCGGCACCACCGAGACGACGAGCGAACGCGGCGGTGCCGAGC GGTTCTACTTCAACTTCACCGGGTTCCCCTTCCCGCTCGGGCCGTTCCTCAACCGCCGCA CCATCCGCACCGAGGCGGTGAAGGGGAGGATATGGCTGTTCGAGCAGGAGCAGGCACTGG GGTTCAGCAGCGTCTCCACCAACACCCGCATGACCGTCATCAAGCTCAAGTCCGGCGGCC TCTGGGTGCACGCCCCCATCGCGCCGACCAAGGAGTGCATCCAGCTTCTCAAGGAGCTCG ACGCGCCGGTGGAGCACATCGTGCTGCCGACCTTCGCCTACGAGCACAAGGTCTTCTTCG GGCCATTCACCAGGAAATTCCCCAGGGCGCAGATATGGGTGGCGCCCAGGCAGTGGAGCT GGCCGATCAACCTGCCGCTGGAGTTCTTCGGGATCTTCCGGGCCAAGCCCCTCCAAGACG AGGACGACGACACCCCATGGGCGGGCGAGATCGAGCAGAAGATGCTCAGCTCGCCTGAAG TTGGGATTGGACCCTATGTGGAGGTGGCATTCTACCACAAGCCTTCGCGGACATTGTTGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)