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Oryza sativa
cluster # 10460 cluster # 10460       Sequences # 7       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10460#0 length = 1771 sequences # 3  
 consensus_10460#1 length = 1621 sequences # 4  
consensusID : consensus_10460#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1771
fasta sequence 
                              [TTCGAAGCCCCTCGTTCCCCTCTCTCTCTCTCCTCCACCTCGCTCCCACCTCCTCCTCCTCGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTACGCTTCTTCTTATCTTACATGGTTTCGTGTTGCATGCCTTGTTGAATTTTTCTTTGTCCAATGAACTATGAGAAATTATGGATTTATATTGTTGTTTTAGGTTTCACAAGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAAGACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAATTTTCTACCCCAATG]

[+] EMBL AK071933             [TTCGAAGCCCCTCGTTCCCCTCTCTCTCTCTCCTCCACCTCGCTCCCACCTCCTCCTCCTCGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTACGCTTCTTCTTATCTTACATGGTTTCGTGTTGCATGCCTTGTTGAATTTTTCTTTGTCCAATGAACTATGAGAAATTATGGATTTATATTGTTGTTTTAGGTTTCACAAGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAAGACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAA               ]
[+] EMBL AU032257             [   GAAGCCCCTCGTNCCCCTCTCTCTCTCTCCTCCACCTCGCTCCCACCTCCTCCTCCTCGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAG CACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACG CGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCG GCGCTGGAGGAGCGCNCNGCCGAGGAGATCATCAAGAACCAATTGCAGANCCACTTTGAAAATGTGCAGAAGATCTCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB650768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCCTTATAGGAAATTTTCTACCCCAATG]




>consensus_10460#0
TTCGAAGCCCCTCGTTCCCCTCTCTCTCTCTCCTCCACCTCGCTCCCACCTCCTCCTCCT
CGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACC
ACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCG
GCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTT
GGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGC
CGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGA
CACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGA
TATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCT
GACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTACGCTTCTTCT
TATCTTACATGGTTTCGTGTTGCATGCCTTGTTGAATTTTTCTTTGTCCAATGAACTATG
AGAAATTATGGATTTATATTGTTGTTTTAGGTTTCACAAGGACTGTTTCTTCAATATGGG
CGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCT
ACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTA
GCAAAAGCGGGCACAAAGACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCA
ATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGA
AAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCA
TGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGT
ATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATG
TTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCA
GAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTG
TACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAG
TAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTA
TCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAG
AAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAG
AACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACT
GATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCT
AACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAG
CACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTG
ACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTT
CATTCAGAATGTAAAATTTTCTACCCCAATG

consensusID : consensus_10460#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1621
fasta sequence 
                              [AACCAGGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTTTCACAAGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAATACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAG-AGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAATTTTCTACCCAATGGTTTTGAGA]

[+] EMBL AK101689             [AACCAGGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTTTCACAAGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAATACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAG AGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAATTTTCTACCCAATGGTTTTGAGA]
[+] EMBL CB669828             [                             CAATCGACCTCGCCGACGGGCGGAGCCACCACCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTTTCACAAGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAAGACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA753278             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCANCTTCTGAACTCCGGAAACAGAAGGCNGAGNAGA                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB669829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATACTTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAG AGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAATTT                    ]




>consensus_10460#1
AACCAGGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCA
CCACCACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGG
CACCGGCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGG
TACTTGGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGC
GCCGCCGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATC
TCAGACACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAA
TTGGATATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCT
GCCCTGACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTTTCACA
AGGACTGTTTCTTCAATATGGGCGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTC
ACCATATTAGGCAGACATCTCTACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTA
CAGGAGGGTTCTGACACCTTTAGCAAAAGCGGGCACAAATACTTTCTTGCAACTGCTGAT
TACCTTGCCACATATGGTATCAATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAA
ATCTTGAAAGAGAAACAACTGAAAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATT
TTACAAATATTGAAGCAGTTCATGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTT
GTACCTGAGAATGCCAATGTGTATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGAT
GATTCTTCACTTCTGAAGGATGTTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATA
GTTTTGTCAAGTGATGATTTCAGAAATATCATGGATAGATCATTGAAGAAGATAGCTAGC
GTGGTGGTAGAGGACTTGGCTGTACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCC
TTAGCAAAGCTCTTGGCCAAAGTAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGAT
AAGAACAAGCACATTCAGATTATCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTC
CTCTACGCAAACATGCCACCAGAAACATAATGAAGCACACTAATGTGGAATGCAATACAT
TGGTCCCGAATTTTGCCATTAGAACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGA
AACAGAAGGCGGAGAGAAGACTGATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTC
CAGTTGTCACTAACACGGATCTAACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTT
GTGTGCTTCTAGCTAGAACCAGCACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGAT
CTTACTATGGAAATTGTACTTGACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACA
TGTTACTATTTCTTTGCTCCTTCATTCAGAATGTAAAATTTTCTACCCAATGGTTTTGAG
A

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10460#0      TTCGAAGCCCCTCGTTCCCCTCTCTCTCTCTCCTCCACCTCGCTCCCACCTCCTCCTCCT 60
consensus_10460#1      -------------------------------------------------------AACCA 5
                                                                                ** 

consensus_10460#0      CGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACC 120
consensus_10460#1      GGGCTTTGCTGATCCAGGACGAGCCAATCGAGCTCGCCGACGGGCGGAGCCACCACCACC 65
                        ***********************************************************

consensus_10460#0      ACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCG 180
consensus_10460#1      ACCACCCATCCCCGGCGCCGCCATGCTGGCTTCCGCGAGGGGGTTCTGGGGGCGGCACCG 125
                       ************************************************************

consensus_10460#0      GCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTT 240
consensus_10460#1      GCGGAAGATACTGGTCTCGCTCGGGGTCGCCGGCGCCGGCTACGCCGCGTACAGGTACTT 185
                       ************************************************************

consensus_10460#0      GGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGC 300
consensus_10460#1      GGACTCGCACCGGAGGCAGCTCGTCCGGGTGGAGCAGCGCGCGCTGGAGGAGCGCGCCGC 245
                       ************************************************************

consensus_10460#0      CGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGA 360
consensus_10460#1      CGAGGAGATCATCAAGAACCAATTGCAGACCCACTTTGAAAATGTGCAGAAGATCTCAGA 305
                       ************************************************************

consensus_10460#0      CACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGA 420
consensus_10460#1      CACGACCACACTGCCTTTTGCTATGCATTATCTCCGTTCAAGGATCATGGAGGAATTGGA 365
                       ************************************************************

consensus_10460#0      TATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCT 480
consensus_10460#1      TATTTCACACCTGACTGAGAAGCTAATGCACGGGAAGGGAGAATCCAGTGCCCCTGCCCT 425
                       ************************************************************

consensus_10460#0      GACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGTACGCTTCTTCT 540
consensus_10460#1      GACACCAAAGGAGAAGTATGACACTTGGGAGAAGATCAAAATTTTGAGT----------- 474
                       *************************************************           

consensus_10460#0      TATCTTACATGGTTTCGTGTTGCATGCCTTGTTGAATTTTTCTTTGTCCAATGAACTATG 600
consensus_10460#1      ------------------------------------------------------------
                                                                                   

consensus_10460#0      AGAAATTATGGATTTATATTGTTGTTTTAGGTTTCACAAGGACTGTTTCTTCAATATGGG 660
consensus_10460#1      --------------------------------TTCACAAGGACTGTTTCTTCAATATGGG 502
                                                       ****************************

consensus_10460#0      CGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCT 720
consensus_10460#1      CGATGACGTTGCTTAGCTTATATGTTAGAGTCCAGGTCACCATATTAGGCAGACATCTCT 562
                       ************************************************************

consensus_10460#0      ACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTA 780
consensus_10460#1      ACTTAGATTTTGCTCGTGTTACGGATGGTGCGCAATTACAGGAGGGTTCTGACACCTTTA 622
                       ************************************************************

consensus_10460#0      GCAAAAGCGGGCACAAAGACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCA 840
consensus_10460#1      GCAAAAGCGGGCACAAATACTTTCTTGCAACTGCTGATTACCTTGCCACATATGGTATCA 682
                       ***************** ******************************************

consensus_10460#0      ATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGA 900
consensus_10460#1      ATGCATTAATTACAAAGATGCAGCATGCTGCAACAGAAATCTTGAAAGAGAAACAACTGA 742
                       ************************************************************

consensus_10460#0      AAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCA 960
consensus_10460#1      AAGACCCTATGGGCATTGATGAAGTCCTAGAAACAATTTTACAAATATTGAAGCAGTTCA 802
                       ************************************************************

consensus_10460#0      TGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGT 1020
consensus_10460#1      TGGGTCTTTGTGAAGATAACTCTTGGATAAACTACCTTGTACCTGAGAATGCCAATGTGT 862
                       ************************************************************

consensus_10460#0      ATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATG 1080
consensus_10460#1      ATGCACAGTTGATGGCTGTGTCCAGTAGTGGCTTTGATGATTCTTCACTTCTGAAGGATG 922
                       ************************************************************

consensus_10460#0      TTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCA 1140
consensus_10460#1      TTAGGAAGCTTGATCAGTTAATGTCTGAGACACGTATAGTTTTGTCAAGTGATGATTTCA 982
                       ************************************************************

consensus_10460#0      GAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTG 1200
consensus_10460#1      GAAATATCATGGATAGATCATTGAAGAAGATAGCTAGCGTGGTGGTAGAGGACTTGGCTG 1042
                       ************************************************************

consensus_10460#0      TACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAG 1260
consensus_10460#1      TACAGATTGGAGCTCCAATTCCTCCACCTGGATTGCCCTTAGCAAAGCTCTTGGCCAAAG 1102
                       ************************************************************

consensus_10460#0      TAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTA 1320
consensus_10460#1      TAGCTCAACTGAGTTTGCCATTGCTCGAGGAGCCAGATAAGAACAAGCACATTCAGATTA 1162
                       ************************************************************

consensus_10460#0      TCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAG 1380
consensus_10460#1      TCCGAAGTATGCCTGAAGTGGAACTCTTTTACACTTTCCTCTACGCAAACATGCCACCAG 1222
                       ************************************************************

consensus_10460#0      AAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAG 1440
consensus_10460#1      AAACATAATGAAGCACACTAATGTGGAATGCAATACATTGGTCCCGAATTTTGCCATTAG 1282
                       ************************************************************

consensus_10460#0      AACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACT 1500
consensus_10460#1      AACAAGTCTGATATTTTGAGCACTTTCTGAACTCCGGAAACAGAAGGCGGAGAGAAGACT 1342
                       ************************************************************

consensus_10460#0      GATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCT 1560
consensus_10460#1      GATTTATGCTCCTTGCCCCTATGTATGCTGGAGATGTCCAGTTGTCACTAACACGGATCT 1402
                       ************************************************************

consensus_10460#0      AACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAG 1620
consensus_10460#1      AACTGAGCGCAGTCCTTTCTTAATTCATTTCTCTGCTTGTGTGCTTCTAGCTAGAACCAG 1462
                       ************************************************************

consensus_10460#0      CACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTG 1680
consensus_10460#1      CACTGTTTCAGCCCTTTTTTTATATATATTTTTGAGATCTTACTATGGAAATTGTACTTG 1522
                       ************************************************************

consensus_10460#0      ACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTT 1740
consensus_10460#1      ACCAGGGTTTCAATGGTTTATGTAAAGTGTGATATACATGTTACTATTTCTTTGCTCCTT 1582
                       ************************************************************

consensus_10460#0      CATTCAGAATGTAAAATTTTCTACCCCAATG--------- 1771
consensus_10460#1      CATTCAGAATGTAAAATTTTCTACCC-AATGGTTTTGAGA 1621
                       ************************** ****


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)