|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3482 fasta sequence
[CTGCTCCCCTCTCGCAACATCCGGCTCCGCTCGCCTAGGCCGCAAAAACCCTAGGCCTTGCCCCCCGACTCCTCCTCTCCCATGGCGACGCCGGCGACGGCCGCCTCCGACGCGACCAACCCGGAGGCGGCGGAAGTGCCGTCCGCTGCCCCGGCGTCGGAATCGGAAGGACCGTTCGATTCCGGCGTCGTCGCGGCGGCAACGACACCGGCGGTGGTGGATAGTGCGGTGGAGGGAGACGCCCCGGCCGCTCCCGCTCCTACCTCCGGCTCCGGTCCTGCGGCGCCGTCTATGCCGGCGAATCCGGCGTCTCCTGCAACTCCAGGGCCCCCGCGGCCGCAGTTCGCCGGGTCGCCCGCTTACGCGAGCCCCCCGGCGCCGGCGTTCTCGTACAACGTTCTTCCGAGGCCGTCACCCCGGCCGCAGGTGGGCAGTGGTGCGGCCCAGCAGCAGCTAGCTTCCCCTCCGGCCATGATGGCTCCTTCAGTGGCTGCTGCAGCTCTTCAGCCTCCTGTCCCAGGGCAATATTTTGGGAACAGGCCGTCTTTTTCATATAATGTAGTCTCGCATGCTAATGCTGGCTTGCCTACTGGTCAGCAGTTTCAACTTGACACCGGCACAAACCATGCTGTCCAAGTTTCACGGTTTGTTCCACCATCATCCTTGCAACCTCCAGCTCCTATGAATTTAGCTCGCCCAAGTTCAGCATTTCCAGGAGCAGGAGCTATGCCACCAAATCCTCCTGGATCTATTCGCTTGCCATTTCCAGGTCCACCCAGACCATCCATCAATACTTTTGTTGCAAGCCCACAACAGGCACAGCCCCAGGCATCTCAGTTACCTTCAAACAGTGGGAGCTCAGATGTTAGCACTTCCAGGTCTGATACTCGAAGTGTCCCAGAGGCTAGTCCCCAGACCATGCAGTTGTCGACAGGCCCACCATCAACAAGTACTGCTGGAAGTCCTTCAATCACTGTTCAGATGCCAACAAATCCATCACTTCCAACTCGCCCGGAGGTTTTTGGGGCCATTGGTGCTTCTGTACCTGGACAACCTTCCACAATCTTGTCTGCTCCACCAAGCCTCCTTGGGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCTCCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACATGGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCCCCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGTTCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTCTCAACAACTGACAGGGATTCCAAGGAGCTATCATCAGCAAATCCTGGATCTGAGCAGCCCACTCAACAGGGAAGCCAAAACAGCGATCAGCTCGAGGACAAAAGAACTACTGCCATTCAGGATTCAGATTCATGGTCTGCACACAAGACAGAGGCTGGTGTTGTATATTATTACAATGCCTTGACTGGAGAATCAACTTATCAAAAACCACCTGGTTATAAAGGGGAGCCTGAGAAGGTCGCAGCCCAGCCAGTTCCAGTTTCTTGGGACAAACTGGCTGGCACTGACTGGAGCATAGTAACGACAAGTGATGGAAAGAAATATTACTATGATAATAAGCTAAAGGTTAGCAGCTGGCAGCTTCCACCAGAGGTGGCTGAGCTCATCAAGAATGCCGAGTCTGGTCCATTGAAAGGAAGTTCAACTTCGCTGCAAGATGCTGGCACGATAGGGAATAAAGAGGAAATAAGTATTGATATTGATACTCCTGCTGTACAGACAGGTGGCCGTGATTCGTTGCCACTTCGGCAAACAGTTGCCCCTGCATCGTCTTCTGCTTTGGATTTAATAAAGAAGAAATTGCAGGATGCTGGCGCTTCCAGTGTGCCTTCACCTCTTGCTACTCCATCTAGTGCATCCGAGCTGAATGGGTCTAAAACAACTGATGCTGCACCTATGGGACATCAAGTCTCAATTAGCGGCGAGAAATCAAAAGATAACAGTGGTGATGGTAATATGTCAGATTCCTCTTCAAATTCAGATGATGAGGAACATGGCCCAAGTGAAGAGGAGTGTACTCGTCAGTTTAAGGAGATGTTAAAGGAAAGAGGTGTATTGCCATTTTCAAAGTGGGAAAAGGAACTCCCAAAAATAGTGTTTGATCCACG-TTTTAAGGCTATTCCAAGTCACTCGAGGAGACGGTCTACATTTGAGCAGTATGTTCGGACACGTGCTGACGAGGAGCGGAAAGAGAAAAGAGCTGCTCAGAGAGCTGCAGTGGAGGCGTATAAACAGTTACTAGAAGAAGCATCCGAGGACATCAACTCCAATAAGGATTACAAGGAATTCAAAAGAAAATGGGGCACTGATCCAAGGTTTGAAGCCTTGGACCGAAAAGAAAGGGATGCTCTTTTCAACGAGAAGGTGAAATCGATTGAAGAGAAAGTTCAATCAGTGCGCAATGCTGTGATAGCTGAGTTCAAATCAATGCTTCGAGAAAGTAAAGACATAACCTCTACTAGCCGTTGGACCAAAGTGAAAGAAAATTTCCGGAGCGATGCAAGGTACAAAGCCATGAAGCACGAAGAAAGAGAGGTTGCTTTTAATGAGTACATAGCAGAACTAAAATCCGCTGAAAAGGAAGCAGAGCAAGCTGCCAAGGCCAAACTGGATGAACAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGGAAAAGGAAAGAAAGGGAAGAACAGGAAATGGAGAGAGTAAAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCATATCAAGCTTTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTTGAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAGTTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTCCTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCAATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCTAGGTACAACAAACTGGCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTTAAACAGTCAGATATGAAGGAGAGATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGATCCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCTGTAATTCGCTACTCAACATTATTGTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGAAATTTTGAAGCATCCATGTTCTGTGAGTTTTTTGGCCATTCAATTCTATGAGCCGTGCATCC]
[+] EMBL CB645065 [CTGCTCCCCTCTCGCAACATCCGGCTCCGCTCGCCTAGGCCGCAAAAACCCTAGGCCTTGCCCCCCGACTCCTCCTCTCCCATGGCGACGCCGGCGACGGCCGCCTCCGACGCGACCAACCCGGAGGCGGCGGAAGTGCCGTCCGCTGCCCCGGCGTCGGAATCGGAAGGACCGTTCGATTCCGGCGTCGTCGCGGCGGCAACGACACCGGCGGTGGTGGATAGTGCGGTGGAGGGAGACGCCCCGGCCGCTCCCGCTCCTACCTCCGGCTCCGGTCCTGCGGCGCCGTCTATGCCGGCGAATCCGGCGTCTCCTGCAACTCCAGGGCCCCCGCGGCCGCAGTTCGCCGGGTCGCCCGCTTACGCGAGCCCCCCGGCGCCGGCGTTCTCGTACAACGTTCTTCCGAGGCCGTCACCCCGGCCGCAGGTGGGCAGTGGTGCGGCCCAGCAGCAGCTAGCTTCCCCTCCGGCCATGATGGCTCCTTCAGTGGCTGCTGCAGCTCTTCAGCCTCCTGTCCCAGGGCAATATTTTGGGAACAGGCCGTCTTTTTCATATAATGTAGTCTCGCATGCTAATGCTGGCTTGCCTACTGGTCAGCAGTTTCAACTTGACACCGGCACAAACCATGCTGTCCAAGTTTCACGGTTTGTTCCACCATCATCCTTGCAACCTCCAGCTCCTATGAATTTAGCTCGCCCCAG ]
[+] EMBL AK101641 [ CCTCTCGCAACATCCGGCTCCGCTCGCCTAGGCCGCAAAAACCCTAGGCCTTGCCCCCCGACTCCTCCTCTCCCATGGCGACGCCGGCGACGGCCGCCTCCGACGCGACCAACCCGGAGGCGGCGGAAGTGCCGTCCGCTGCCCCGGCGTCGGAATCGGAAGGACCGTTCGATTCCGGCGTCGTCGCGGCGGCAACGACACCGGCGGTGGTGGATAGTGCGGTGGAGGGAGACGCCCCGGCCGCTCCCGCTCCTACCTCCGGCTCCGGTCCTGCGGCGCCGTCTATGCCGGCGAATCCGGCGTCTCCTGCAACTCCAGGGCCCCCGCGGCCGCAGTTCGCCGGGTCGCCCGCTTACGCGAGCCCCCCGGCGCCGGCGTTCTCGTACAACGTTCTTCCGAGGCCGTCACCCCGGCCGCAGGTGGGCAGTGGTGCGGCCCAGCAGCAGCTAGCTTCCCCTCCGGCCATGATGGCTCCTTCAGTGGCTGCTGCAGCTCTTCAGCCTCCTGTCCCAGGGCAATATTTTGGGAACAGGCCGTCTTTTTCATATAATGTAGTCTCGCATGCTAATGCTGGCTTGCCTACTGGTCAGCAGTTTCAACTTGACACCGGCACAAACCATGCTGTCCAAGTTTCACGGTTTGTTCCACCATCATCCTTGCAACCTCCAGCTCCTATGAATTTAGCTCGCCCAAGTTCAGCATTTCCAGGAGCAGGAGCTATGCCACCAAATCCTCCTGGATCTATTCGCTTGCCATTTCCAGGTCCACCCAGACCATCCATCAATACTTTTGTTGCAAGCCCACAACAGGCACAGCCCCAGGCATCTCAGTTACCTTCAAACAGTGGGAGCTCAGATGTTAGCACTTCCAGGTCTGATACTCGAAGTGTCCCAGAGGCTAGTCCCCAGACCATGCAGTTGTCGACAGGCCCACCATCAACAAGTACTGCTGGAAGTCCTTCAATCACTGTTCAGATGCCAACAAATCCATCACTTCCAACTCGCCCGGAGGTTTTTGGGGCCATTGGTGCTTCTGTACCTGGACAACCTTCCACAATCTTGTCTGCTCCACCAAGCCTCCTTGAGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCTCCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACATGGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCCCCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGTTCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTCTCAACAACTGACAGGGATTCCAAGGAGCTATCATCAGCAAATCCTGGATCTGAGCAGCCCACTCAACAGGGAAGCCAAAACAGCGATCAGCTCGAGGACAAAAGAACTACTGCCATTCAGGATTCAGATTCATGGTCTGCACACAAGACAGAGGCTGGTGTTGTATATTATTACAATGCCTTGACTGGAGAATCAACTTATCAAAAACCACCTGGTTATAAAGGGGAGCCTGAGAAGGTCGCAGCCCAGCCAGTTCCAGTTTCTTGGGACAAACTGGCTGGCACTGACTGGAGCATAGTAACGACAAGTGATGGAAAGAAATATTACTATGATAATAAGCTAAAGGTTAGCAGCTGGCAGCTTCCACCAGAGGTGGCTGAGCTCATCAAGAATGCCGAGTCTGGTCCATTGAAAGGAAGTTCAACTTCGCTGCAAGATGCTGGCACGATAGGGAATAAAGAGGAAATAAGTATTGATATTGATACTCCTGCTGTACAGACAGGTGGCCGTGATTCGTTGCCACTTCGGCAAACAGTTGCCCCTGCATCGTCTTCTGCTTTGGATTTAATAAAGAAGAAATTGCAGGATGCTGGCGCTTCCAGTGTGCCTTCACCTCTTGCTACTCCATCTAGTGCATCCGAGCTGAATGGGTCTAAAACAACTGATGCTGCACCTATGGGACATCAAGTCTCAATTAGCGGCGAGAAATCAAAAGATAACAGTGGTGATGGTAATATGTCAGATTCCTCTTCAAATTCAGATGATGAGGAACATGGCCCAAGTGAAGAGGAGTGTACTCGTCAGTTTAAGGAGATGTTAAAGGAAAGAGGTGTATTGCCATTTTCAAAGTGGGAAAAGGAACTCCCAAAAATAGTGTTTGATCCACG TTTTAAGGCTATTCCAAGTCACTCGAGGAGACGGTCTACATTTGAGCAGTATGTTCGGACACGTGCTGACGAGGAGCGGAAAGAGAAAAGAGCTGCTCAGAGAGCTGCAGTGGAGGCGTATAAACAGTTACTAGAAGAAGCATCCGAGGACATCAACTCCAATAAGGATTACAAGGAATTCAAAAGAAAATGGGGCACTGATCCAAGGTTTGAAGCCTTGGACCGAAAAGAAAGGGATGCTCTTTTCAACGAGAAGGTGAAATCGATTGAAGAGAAAGTTCAATCAGTGCGCAATGCTGTGATAGCTGAGTTCAAATCAATGCTTCGAGAAAGTAAAGACATAACCTCTACTAGCCGTTGGACCAAAGTGAAAGAAAATTTCCGGAGCGATGCAAGGTACAAAGCCATGAAGCACGAAGAAAGAGAGGTTGCTTTTAATGAGTACATAGCAGAACTAAAATCCGCTGAAAAGGAAGCAGAGCAAGCTGCCAAGGCCAAACTGGATGAACAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGGAAAAGGAAAGAAAGGGAAGAACAGGAAATGGAGAGAGTAAAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCATATCAAGCTTTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTTGAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAGTTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTCCTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCAATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCTAGGTACAACAAACTGGCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTTAAACAGTCAGATATGAAGGAGAGATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGATCCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCTGTAATTCGCTACTCAACATTATTGTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGAAATTTTGAAGCATCCATGTTCTGTGAGTTTTTTGGCCATTCAATTCTATGAGCCGTGCATCC]
[+] EMBL CB670746 [ AGTTTCACCTTGACACCGGCACAAACCATGCTGTCCAAGTTTCACGGTTTGTTCCACCATCATCCTTGCAACCTCCAGCTCCTATGAATTTAGCTCGCCCAAGTTCAGCATTTCCAGGAGCAGGAGCTATGCCACCAAATCCTCCTGGATCTATTCGCTTGCCATTTCCAGGTCCACCCAGACCATCCATCAATACTTTTGTTGCAAGCCCACAACAGGCACAGCCCCAGGCATCTCAGTTACCTTCAAACAGTGGGAGCTCAGATGTTAGCACTTCCAGGTCTGATACTCGAAGTGTCCCAGAGGCTAGTCCCCAGACCATGCAGTTGTCGACAGGCCCACCATCAACAAGTACTGCTGGAAGTCCTTCAATCACTGTTCAGATGCCAACAAATCCATCACTTCCAACTCGCCCGGAGGTTTTTGGGGCCATTGGTGCTTCTGTACCTGGACAACCTTCCACAATCTTGTCTGCTCCACCAAGCCTCCTTGGGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCTCCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACATGGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCCCCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGTTCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTC ]
[-] EMBL CB645066 [ CTCGCCCAAGTTCAGCATTTCCAGGAGCAGGAGCTATGCCACCAAATCCTCCTGGATCTATTCGCTTGCCATTTCCAGGTCCACCCAGACCATCCATCAATACTTTTGTTGCAAGCCCACAACAGGCACAGCCCCAGGCATCTCAGTTACCTTCAAACAGTGGGAGCTCAGATGTTAGCACTTCCAGGTCTGATACTCGAAGTGTCCCAGAGGCTAGTCCCCAGACCATGCAGTTGTCGACAGGCCCACCATCAACAAGTACTGCTGGAAGTCCTTCAATCACTGTTCAGATGCCAACAAATCCATCACTTCCAACTCGCCCGGAGGTTTTTGGGGCCATTGGTGCTTCTGTACCTGGACAACCTTCCACAATCTTGTCTGCTCCACCAAGCCTCCTTGGGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCTCCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACATGGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCCCCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGTTCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTCTCAACAACTGACAGGGATTCCAAGGAGCT ]
[+] EMBL CF325716 [ TCCACCAAGCCTCCTTGGGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCTCCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACATGGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCCCCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGTTCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTCTCAACAACTGACAGGGATTCCAAGGAGCTATCATCAGCAAATCCTGGATCTGAGCAGCCCACTCAACAGGGAAGCCAAAACAGCGATCAGCTCGAGGACAAAAGAACTACTGCCATTCAGGATTCAGATTCATGGTCTGCACACAAGACAGAGGCTGGTGTTGTATATTATTACAATGCCTTGACTGGAGAA ]
[-] EMBL CB670747 [ CTCGAGGACAAAAGAACTACTGCCATTCAGGATTCAGATTCATGGTCTGCACACAAGACAGAGGCTGGTGTTGTATATTATTACAATGCCTTGACTGGAGAATCAACTTATCAAAAACCACCTGGTTATAAAGGGGAGCCTGAGAAGGTCGCAGCCCAGCCAGTTCCAGTTTCTTGGGACAAACTGGCTGGCACTGACTGGAGCATAGTAACGACAAGTGATGGAAAGAAATATTACTATGATAATAAGCTAAAGGTTAGCAGCTGGCAGCTTCCACCAGAGGTGGCTGAGCTCATCAAGAATGCCGAGTCTGGTCCATTGAAAGGAAGTTCAACTTCGCTGCAAGATGCTGGCACGATAGGGAATAAAGAGGAAATAAGTATTGATATTGATACTCCTGCTGTACAGACAGGTGGCCGTGATTCGTTGCCACTTCGACAAACAGTTGCCCCTGCATCGTCTTCTGCTTTGGATTTAATAAAGAAGAAATTGCAGGATGCTGGCGCTTCCAGTGTGCCTTCACCTCTTGCTACTCCATCTAGTGCATCCGAGCTGAATGGGTCTAAAACAACTGATGCTGCACCTATGGGACATCAAGTCTCAATTAGCGGCGAGAAATCAAAAGATAACAGTGGTGATGGTAATATGTCAGATTCCTCTTCAAATTCAGATGATGAGGAACATGGCCCAAGTGAAGAGGAGTGTACTCGTCAGTTTAAGGAGATGTTAAAGGAAAGAGGTGTATTGCCATTTTCAAAGTGAAAGGAGGAACTCCCAAAAATAGTGTTTGATCCACGTTTTTAAGGgatt ]
consensusID : consensus_10471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[NCTGGATGANCAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGAAAAAGGAAAGAAAGGGAAGAACAGGAAATGGAAAGAGTANAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCGTATCAAGCTTTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTTGAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAGTTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTCCTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCAATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCCAGGTACAACAAACTGGCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTTAAACAGTCAGATATGAAGGAGAAATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGATCCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCCGTAATTCGCTACTCAACATTATTGTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGAAATTTTGAAGCAAAAAAAAAAAA]
[-] EMBL CA759205 [NCTGGATGANCAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGAAAAAGGAAAGAAAGGGAAGAACAGGAAATGGAAAGAGTANAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCGTATCAAGCTTTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTTGAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAGTTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTCCTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCAATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCCAGGTACAACAAACTGGCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTTAAACAGTCAGATATGAAGGAGAAATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGATCCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCCGTAATTCGCTACTCAACATTATTGTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGAAATTTTGAAGCAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10471#0 CTGCTCCCCTCTCGCAACATCCGGCTCCGCTCGCCTAGGCCGCAAAAACCCTAGGCCTTG 60
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCCCCCGACTCCTCCTCTCCCATGGCGACGCCGGCGACGGCCGCCTCCGACGCGACCAAC 120
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCGGAGGCGGCGGAAGTGCCGTCCGCTGCCCCGGCGTCGGAATCGGAAGGACCGTTCGAT 180
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TCCGGCGTCGTCGCGGCGGCAACGACACCGGCGGTGGTGGATAGTGCGGTGGAGGGAGAC 240
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GCCCCGGCCGCTCCCGCTCCTACCTCCGGCTCCGGTCCTGCGGCGCCGTCTATGCCGGCG 300
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AATCCGGCGTCTCCTGCAACTCCAGGGCCCCCGCGGCCGCAGTTCGCCGGGTCGCCCGCT 360
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TACGCGAGCCCCCCGGCGCCGGCGTTCTCGTACAACGTTCTTCCGAGGCCGTCACCCCGG 420
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCGCAGGTGGGCAGTGGTGCGGCCCAGCAGCAGCTAGCTTCCCCTCCGGCCATGATGGCT 480
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCTTCAGTGGCTGCTGCAGCTCTTCAGCCTCCTGTCCCAGGGCAATATTTTGGGAACAGG 540
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCGTCTTTTTCATATAATGTAGTCTCGCATGCTAATGCTGGCTTGCCTACTGGTCAGCAG 600
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TTTCAACTTGACACCGGCACAAACCATGCTGTCCAAGTTTCACGGTTTGTTCCACCATCA 660
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TCCTTGCAACCTCCAGCTCCTATGAATTTAGCTCGCCCAAGTTCAGCATTTCCAGGAGCA 720
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GGAGCTATGCCACCAAATCCTCCTGGATCTATTCGCTTGCCATTTCCAGGTCCACCCAGA 780
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCATCCATCAATACTTTTGTTGCAAGCCCACAACAGGCACAGCCCCAGGCATCTCAGTTA 840
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCTTCAAACAGTGGGAGCTCAGATGTTAGCACTTCCAGGTCTGATACTCGAAGTGTCCCA 900
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GAGGCTAGTCCCCAGACCATGCAGTTGTCGACAGGCCCACCATCAACAAGTACTGCTGGA 960
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AGTCCTTCAATCACTGTTCAGATGCCAACAAATCCATCACTTCCAACTCGCCCGGAGGTT 1020
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TTTGGGGCCATTGGTGCTTCTGTACCTGGACAACCTTCCACAATCTTGTCTGCTCCACCA 1080
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AGCCTCCTTGGGAGACCTATGACTCCATCTGCTTCTCCTTTTCCCCAAACATCGCAGTCT 1140
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCAACTGCTTTTCAACAGCCTGGTCAGCAACAGTTGTACCCCTCCTATCCTTCAGCACAT 1200
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GGGGTTCAACCTCAGCCTCTATGGGGATATCCCCCACAGCCTACTGGTTTTCAGCAACCC 1260
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCCTTCCAATCATACCCATCTGGTCTTCTAGGGCCTCTTGGTAGGCCGATGGTTGGGAGT 1320
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TCTTCTGTGACTGCATACTTGCCAAGCATACAACCACCCGGTGTCTCAACAACTGACAGG 1380
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GATTCCAAGGAGCTATCATCAGCAAATCCTGGATCTGAGCAGCCCACTCAACAGGGAAGC 1440
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CAAAACAGCGATCAGCTCGAGGACAAAAGAACTACTGCCATTCAGGATTCAGATTCATGG 1500
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TCTGCACACAAGACAGAGGCTGGTGTTGTATATTATTACAATGCCTTGACTGGAGAATCA 1560
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 ACTTATCAAAAACCACCTGGTTATAAAGGGGAGCCTGAGAAGGTCGCAGCCCAGCCAGTT 1620
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CCAGTTTCTTGGGACAAACTGGCTGGCACTGACTGGAGCATAGTAACGACAAGTGATGGA 1680
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AAGAAATATTACTATGATAATAAGCTAAAGGTTAGCAGCTGGCAGCTTCCACCAGAGGTG 1740
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GCTGAGCTCATCAAGAATGCCGAGTCTGGTCCATTGAAAGGAAGTTCAACTTCGCTGCAA 1800
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GATGCTGGCACGATAGGGAATAAAGAGGAAATAAGTATTGATATTGATACTCCTGCTGTA 1860
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CAGACAGGTGGCCGTGATTCGTTGCCACTTCGGCAAACAGTTGCCCCTGCATCGTCTTCT 1920
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GCTTTGGATTTAATAAAGAAGAAATTGCAGGATGCTGGCGCTTCCAGTGTGCCTTCACCT 1980
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 CTTGCTACTCCATCTAGTGCATCCGAGCTGAATGGGTCTAAAACAACTGATGCTGCACCT 2040
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 ATGGGACATCAAGTCTCAATTAGCGGCGAGAAATCAAAAGATAACAGTGGTGATGGTAAT 2100
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 ATGTCAGATTCCTCTTCAAATTCAGATGATGAGGAACATGGCCCAAGTGAAGAGGAGTGT 2160
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 ACTCGTCAGTTTAAGGAGATGTTAAAGGAAAGAGGTGTATTGCCATTTTCAAAGTGGGAA 2220
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AAGGAACTCCCAAAAATAGTGTTTGATCCACGTTTTAAGGCTATTCCAAGTCACTCGAGG 2280
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AGACGGTCTACATTTGAGCAGTATGTTCGGACACGTGCTGACGAGGAGCGGAAAGAGAAA 2340
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 AGAGCTGCTCAGAGAGCTGCAGTGGAGGCGTATAAACAGTTACTAGAAGAAGCATCCGAG 2400
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GACATCAACTCCAATAAGGATTACAAGGAATTCAAAAGAAAATGGGGCACTGATCCAAGG 2460
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 TTTGAAGCCTTGGACCGAAAAGAAAGGGATGCTCTTTTCAACGAGAAGGTGAAATCGATT 2520
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GAAGAGAAAGTTCAATCAGTGCGCAATGCTGTGATAGCTGAGTTCAAATCAATGCTTCGA 2580
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GAAAGTAAAGACATAACCTCTACTAGCCGTTGGACCAAAGTGAAAGAAAATTTCCGGAGC 2640
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GATGCAAGGTACAAAGCCATGAAGCACGAAGAAAGAGAGGTTGCTTTTAATGAGTACATA 2700
consensus_10471#1 ------------------------------------------------------------
consensus_10471#0 GCAGAACTAAAATCCGCTGAAAAGGAAGCAGAGCAAGCTGCCAAGGCCAAACTGGATGAA 2760
consensus_10471#1 --------------------------------------------------NCTGGATGAN 10
********
consensus_10471#0 CAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGGAAAAGGAAAGAAAGGGAAGAACAG 2820
consensus_10471#1 CAAGCCAAGTTAAAGGAGAGGGAGCGCGAGATGCGAAAAAGGAAAGAAAGGGAAGAACAG 70
*********************************** ************************
consensus_10471#0 GAAATGGAGAGAGTAAAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCATATCAAGCT 2880
consensus_10471#1 GAAATGGAAAGAGTANAATTGAAGATCCGAAGAAAAGAGGCCGTGTCTTCGTATCAAGCT 130
******** ****** ********************************** *********
consensus_10471#0 TTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTT 2940
consensus_10471#1 TTACTTGTTGAAATCATAAAAGATCCCAAGGCATCATGGACAGAATCCAAACCAAGACTT 190
************************************************************
consensus_10471#0 GAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAG 3000
consensus_10471#1 GAAAAGGATCCACAAGGCCGTGCAGTAAATCCTGATTTAGGTAAAGGTGATGCAGAAAAG 250
************************************************************
consensus_10471#0 TTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTC 3060
consensus_10471#1 TTATTTCGTGACCATGTCAAGGACCTGTATGAGCGATGTGTTCGGGATTTCCGTGCGCTC 310
************************************************************
consensus_10471#0 CTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCA 3120
consensus_10471#1 CTATCTGAGGTGATAACTCCAGAGATAGCTGCTCGAACAACAGATGAAGGAAAGACTGCA 370
************************************************************
consensus_10471#0 ATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCTAGGTACAACAAACTG 3180
consensus_10471#1 ATTAACTCCTGGACCGAAGCAAAAGGTCTTCTAAGATCTGATCCCAGGTACAACAAACTG 430
******************************************** ***************
consensus_10471#0 GCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTT 3240
consensus_10471#1 GCAAGTAAAGACCGGGAGTCTATTTGGCGGCGCTATGCGGACGACATGAAGACAAAACTT 490
************************************************************
consensus_10471#0 AAACAGTCAGATATGAAGGAGAGATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGAT 3300
consensus_10471#1 AAACAGTCAGATATGAAGGAGAAATCAGATACAGATGGAAAGCAGCGTAGGTCCTCTGAT 550
********************** *************************************
consensus_10471#0 CCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCTGTAATTCGCTACTCAACATTATT 3360
consensus_10471#1 CCGCCAAGGCGGAGATAGCTTTTAGAAATGCCCACCCGTAATTCGCTACTCAACATTATT 610
************************************ ***********************
consensus_10471#0 GTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGA 3420
consensus_10471#1 GTTAACAGTAGTTCAGATTCTGTTTACACTTGTAACAATGAGGGCGTCAAATTAACTGGA 670
************************************************************
consensus_10471#0 AATTTTGAAGCATCCATGTTCTGTGAGTTTTTTGGCCATTCAATTCTATGAGCCGTGCAT 3480
consensus_10471#1 AATTTTGAAGCAAAAAAAAAAAA------------------------------------- 693
************ *
consensus_10471#0 CC 3482
consensus_10471#1 --
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||