These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10474#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1013 fasta sequence [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC-ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT-GAGCGAGAGCGTGTGGAATG-----GGCGGCGGCGGCGGCGGAGATGGAGATGGTG-GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCCAGGCGGCGGTCGCCTTCGCGGCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAGCGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCACCAGCAACACCGGCTGTCACGTTGAGCGCTGTATCACCACCACCACCACCACCTGCGTTCGCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGCATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACCAGCCAGTGCGAACGAGTCAGAGGACGCGGCGGC] [+] EMBL CB640130 [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCGTGTGGAATG GGCGGCGGCGGCGGCGGAGATGGAGATGGTGNGGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATG ] [+] EMBL CB640756 [AGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCTCTCTCTCTATCTCTCTCTCGCCTTTTGCACCATTACCAGCAGCAGCTAGCTACTACTGCAGCCTGCAGGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAG ] [+] EMBL CB629360 [ GCTACTACTGCAGCCTGCAGGCCCCT CCTCCTCTTGCTGCTGTGCTGCCTTGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCC ATATGATGATCTCTGCTCCTCCAACCTAGCTGTGTATAACTCCCATAGAATCAGCAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTATCACTCTCACCATCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCT ACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCGTGTGGAATGGCGGCGGCGGCGGCGGCGGCGGAGATGGAGATGGTG GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCG ] [+] EMBL CB639459 [ ACTGCAGACTGCACGCCCCTCCCTCCTCTTGCTGCTGTGCTGCCTCCAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCACTTCATTTCATAGCCCAATATGATGATCTCTGCTCCTCCAACCTACCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAACTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAGCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGGTTAGCTACGACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCG ] [+] EMBL CB662982 [ GCAGGCCCCTCCCTCCTCTTGCTGCAGTGCAGCCTCAAACGATTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAACCC ATATGATGATCTCTGCTCCCCCAACCTAGCTGTGCATAACTCCCATAGAATCAACAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTACCACTCTCACCAACTCGATCCATCGATCAACCCAACTAAAGAGTAACAAGAGGTTACCTACTACGACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTTATAGCGAGAGCGTGTGGAAT GGCGGCGGCGGCGGCGGAGATGGAt ] [+] EMBL C74560 [ ACGACGGTGTGGATGGATCGTGGCTTCAACGAGATGATCTT GAGCGAGAGCTTGTGGAAT GGCGGCGGCGGCGGCGGAGATGGAGATGGTG GGGCGGTGGTGCTGCCGCCGGAGGTGGGTGGTGTCAATGCGGTGGACGGGAGCGGCATGACGATGCTGGAGANGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTTCCGCGGGGGCG ] [+] EMBL CB626584 [ AGCGGCATGACGATGCTGGAGAGGCTGGTGCTCGACGAGGCCCTGGCGGCGGCGATACTCGAGCTGCAGGGCATCCAGGCGCCGGGGTGCGGCGGCGGCGGCTGCAAGGTGGCGGTGGTGCCGCCGCCGACGGCCGGTGACGGCGGCGTCCAGGCGGCGGTCGCCTTCGCGGCGATGGCGACGGGGACGCCTGCCTACGCTGACGTTGACGCGGATGTCCTGCAGCGACAGCGGCAGCATCACCATCGCCACCAGGGCGCGATGGGGATGGCTGCCGAGTACGACGTCGCACCAGCAACACCGGCTGTCACGTTGAGCGCTGTATCACCACCACCACCACCACCTGCGTTCGCGACCGCAGCCGCCTCCGTTGACGGCGGCGGCGCCATGGACGCGACGGTCTTCTCCGGCATCGGCAACGACGACGTCGTCGACGCGGTGAGCGCCACGGTGGCGATGACTACCAGCCAGTGCGAACGAGTCAGAGGACGCGGCGGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||