These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10490#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2585 fasta sequence [AGAGGATAATGTATCTTCCAATGTGGAGAGCAGGCCCTTACCCGGTTCACCTTCTCAGAGTTGCTGCATTCAACCTAATCTGGCTAAAGATTGTGTTAATTACCTGAAAAGCGGGTTGCCAAGTCGCATTGCATTTTACAAACAAGGTGCATGGTGTGATTTCCCTCAGAAAATAATGGAGTCCCTTGTTGAGGGATTCAAAGCTGATAAATCTAGTGCTGTAGTTGTGATGGATGATCAGCCTCTGCTTGTTGATTTCTTGTCGATGACCATGGTGAACCTAAAAACAAGAAAGCAGAGATCTGTTTCATGGCTAGATGGCACTGGCAAGTGGTTTTTTCCTTCTGCATTCTTTGACGAGGGCGTTGATGAATCCAGAAAATTAAACATGGGTTCTGAAGGCAGCGGACAAGGTCTAACTGAGGGGATGGCTCCAAAGGCTCCAAATGAACTGGTGAAGCAAGCTGTCGTTGAAACTAGCTCTCCAGTTTTACAGAATTCTTGTATTCCTGACATATTACGCAAGAAGATTGTGCCTGTTGAAAGAGGCAGTGAGAGCTTTCAGTTTGTTCAGAACCTTTTCCTCTCTGGCATGGGTTCATTTGCATCACCTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGCACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTATGCTGATGTGAGATATGGATGGC---GATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAATGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCTCTCGCCTGAAAACCGTGCATTTACCAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGTTCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATCACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTATTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTTTAGGCTCACACCAGAAATTCAAGACTACTTGCTTCACTTGAAGGGTTTATGGTTGTGCCCACCACCAAAAGAAGTGGAAGTGGATCTTTCTACTCTTCAACCTCCGTCAGAATGGTACAAGTCTTGTTCAGAAGTTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAGTATGTGTTCTGAAAGCTTTTCATCCCATTGCACAAAAAGTCAGGATTCTGTTGTGAGGATGAGACCCGATGACACCCTTGTGAGGAGGGCATTAATCAGTGATAGTGTTAATGGCTGTGATTCTGTTGGACCAACTGTTGAATCGCATTGCCATTCTCTCCTTTCGCAGAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCAGGTGTTTGTCGCTCCACTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGTTATTCTGCAGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCTGGCTGGTTACTCAACAGAGATTGTACATTTTGTACAGTTGGTCATGCTTTTTCACATGTGTATATACATTGACTGGCATATTTCATAGTAGTACATAAACCTGAAAGTTGCTGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGA] [+] EMBL AK065783 [AGAGGATAATGTATCTTCCAATGTGGAGAGCAGGCCCTTACCCGGTTCACCTTCTCAGAGTTGCTGCATTCAACCTAATCTGGCTAAAGATTGTGTTAATTACCTGAAAAGCGGGTTGCCAAGTCGCATTGCATTTTACAAACAAGGTGCATGGTGTGATTTCCCTCAGAAAATAATGGAGTCCCTTGTTGAGGGATTCAAAGCTGATAAATCTAGTGCTGTAGTTGTGATGGATGATCAGCCTCTGCTTGTTGATTTCTTGTCGATGACCATGGTGAACCTAAAAACAAGAAAGCAGAGATCTGTTTCATGGCTAGATGGCACTGGCAAGTGGTTTTTTCCTTCTGCATTCTTTGACGAGGGCGTTGATGAATCCAGAAAATTAAACATGGGTTCTGAAGGCAGCGGACAAGGTCTAACTGAGGGGATGGCTCCAAAGGCTCCAAATGAACTGGTGAAGCAAGCTGTCGTTGAAACTAGCTCTCCAGTTTTACAGAATTCTTGTATTCCTGACATATTACGCAAGAAGATTGTGCCTGTTGAAAGAGGCAGTGAGAGCTTTCAGTTTGTTCAGAACCTTTTCCTCTCTGGCATGGGTTCATTTGCATCACCTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGCACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTATGCTGATGTGAGATATGGATGGC GATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAATGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCTCTCGCCTGAAAACCGTGCATTTACCAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGTTCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATCACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTATTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTTTAGGCTCACACCAGAAATTCAAGACTACTTGCTTCACTTGAAGGGTTTATGGTTGTGCCCACCACCAAAAGAAGTGGAAGTGGATCTTTCTACTCTTCAACCTCCGTCAGAATGGTACAAGTCTTGTTCAGAAGTTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAGTATGTGTTCTGAAAGCTTTTCATCCCATTGCACAAAAAGTCAGGATTCTGTTGTGAGGATGAGACCCGATGACACCCTTGTGAGGAGGGCATTAATCAGTGATAGTGTTAATGGCTGTGATTCTGTTGGACCAACTGTTGAATCGCATTGCCATTCTCTCCTTTCGCAGAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCAGGTGTTTGTCGCTCCACTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGTTATTCTGCAGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCTGGCTGGTTACTCAACAGAGATTGTACATTTTGTACAGTTGGTCATGCTTTTTCACATGTGTATATACATTGACTGGCATATTTCATAGTAGTACATAAACCTGAAAGTTGCTGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGA] [+] EMBL CB640730 [ CTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGCACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTATGCTGATGTGAGATATGGATGGCTTGGATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAATGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCTCTCGCCTGAAAACCGTGCATTTACCAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGTTCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATCACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTATTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTTTAGGCTCACACCAGAAATTCAAGACTACT ] consensusID : consensus_10490#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1164 fasta sequence [TTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAACCATGCCTGAAGCTCCCTTTTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAACCCTCCATTGTTTGGCCTTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTTCACCACCCAATGTAGTTCTCCATGGTCCTGATCCCCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCAGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGTTATTTTGCGGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCCAGCCTGAAAGTTGCTGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGAACTGGAAAGTGGAAACCCTGAAATCCCAACTTAGAAACTTCTGTTAAAAAAAAAAAAAAA] [+] EMBL CF326351 [TTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTNCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCT ] [-] EMBL CA761429 [ ACCATGCCTGAAGCTCCCTTTTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAACCCTCCATTGTTTGGCCTTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTTCACCACCCAATGTAGTTCTCCATGGTCCTGATCCCCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCAGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGTTATTTTGCGGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCCAGCCTGAAAGTTGCTGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGAACTGGAAAGTGGAAACCCTGAAATCCCAACTTAGAAACTTCTGTTAAAAAAAAAAAAAAA] [-] EMBL CA761468 [ ACCATGCCTGAAGCTCCCTTTTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAACCCTCCATTGTTTGGCCTTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTTCACCACCCAATGTAGTTCTCCATGGTCCTGATCCCCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCAGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGTTATTTTGCGGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCCAGCCTGAAAGTTGCTGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGAACTGGAAAGTGGAAACCCTGAAATCCCAACTTAGAAACTTCTGTTAAAAAAAAAAAAAAA] consensusID : consensus_10490#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 675 fasta sequence [GCCCCACCTNCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCGGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGCTATTTTGCGGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCCAGCCTGAAAGTTGCTGAACGTTTAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGAACTGGAAAGTGGAAAAAAAAAAAAA] [-] EMBL CA761354 [GCCCCACCTNCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAAGAGTTATGGTTCATTTGTTACTCGGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCATCTTTTCCTCCCTTTGGCAGCGCAAATTTCACCTTGTTAACTTCGATGGCTATTTTGCGGTGGTTAAGTACTGTTGCAGTGTTGCTTCTATACTAACCCAGCCTGAAAGTTGCTGAACGTTTAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACATGTTGTCATTGTGCTTATCTAGTTGAGAATGAACTGGAAAGTGGAAAAAAAAAAAAA] consensusID : consensus_10490#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence [AGCATCATCACCCACAGCCCAGATACCCTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGACCGTAGAAGATTATGGTTCATTTGTTACTCACGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCACTCTTTTCCTCCCTTTGGCACGCGCCAATGTTCCCCTTGTTAACTTCCATGGTTATTCTCCCGTGGTTAAGTACCTGTTGCCACGTGTTGCTTCTATACTAACCTGGCTGGTTACTCACCCGAGATTGTACCTTTTGTACCCTTGGTCATGCTTTTTCACCACTGTGTATATACCCTTGACTGGCATATTTTAGTAGTACCACTAAACCCTGAAAGTTGCTGAATGTTCCAGAGCCCACAGCCCACAGCTTCAGTTTGTCAGGTTAACCCAGGCTGTATCTAACACTGTTGTCCTTGTGCTTAAAAAAAAAA] [+] EMBL BI813833 [AGCATCATCACCCACAGCCCAGATACCCTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGACCGTAGAAGATTATGGTTCATTTGTTACTCACGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAATCCACTCTTTTCCTCCCTTTGGCACGCGCCAATGTTCCCCTTGTTAACTTCCATGGTTATTCTCCCGTGGTTAAGTACCTGTTGCCACGTGTTGCTTCTATACTAACCTGGCTGGTTACTCACCCGAGATTGTACCTTTTGTACCCTTGGTCATGCTTTTTCACCACTGTGTATATACCCTTGACTGGCATATTTTAGTAGTACCACTAAACCCTGAAAGTTGCTGAATGTTCCAGAGCCCACAGCCCACAGCTTCAGTTTGTCAGGTTAACCCAGGCTGTATCTAACACTGTTGTCCTTGTGCTTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 AGAGGATAATGTATCTTCCAATGTGGAGAGCAGGCCCTTACCCGGTTCACCTTCTCAGAG 60 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TTGCTGCATTCAACCTAATCTGGCTAAAGATTGTGTTAATTACCTGAAAAGCGGGTTGCC 120 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 AAGTCGCATTGCATTTTACAAACAAGGTGCATGGTGTGATTTCCCTCAGAAAATAATGGA 180 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 GTCCCTTGTTGAGGGATTCAAAGCTGATAAATCTAGTGCTGTAGTTGTGATGGATGATCA 240 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 GCCTCTGCTTGTTGATTTCTTGTCGATGACCATGGTGAACCTAAAAACAAGAAAGCAGAG 300 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ATCTGTTTCATGGCTAGATGGCACTGGCAAGTGGTTTTTTCCTTCTGCATTCTTTGACGA 360 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 GGGCGTTGATGAATCCAGAAAATTAAACATGGGTTCTGAAGGCAGCGGACAAGGTCTAAC 420 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TGAGGGGATGGCTCCAAAGGCTCCAAATGAACTGGTGAAGCAAGCTGTCGTTGAAACTAG 480 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 CTCTCCAGTTTTACAGAATTCTTGTATTCCTGACATATTACGCAAGAAGATTGTGCCTGT 540 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TGAAAGAGGCAGTGAGAGCTTTCAGTTTGTTCAGAACCTTTTCCTCTCTGGCATGGGTTC 600 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ATTTGCATCACCTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGC 660 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTA 720 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TGCTGATGTGAGATATGGATGGCGATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAA 780 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCT 840 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 CTCGCCTGAAAACCGTGCATTTACCAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGT 900 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATC 960 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTA 1020 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTT 1080 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TAGGCTCACACCAGAAATTCAAGACTACTTGCTTCACTTGAAGGGTTTATGGTTGTGCCC 1140 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACCACCAAAAGAAGTGGAAGTGGATCTTTCTACTCTTCAACCTCCGTCAGAATGGTACAA 1200 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 GTCTTGTTCAGAAGTTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAG 1260 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGT 1320 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ------------------------------------------------------------ consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGA 1380 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 -TTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATC-TCCAACAGTAGAATTAACAT 58 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACAATTCTCCATCCCAAGTATGTGTTCTGAAAGCTTTTCATCCCATTGCACAAAAAGTCA 1440 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 AAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAA 118 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 GGATTCTGTTGTGAGGATGAGACCCGATGACACCCTTGTGAGGAGGGCATTAATCAGTGA 1500 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCC--TCAAAAGAGAACAATTCTCC 176 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TAGTGTTAATGGCTGTGATTCTGTTGGACCAACTGTTGAATCGCATTGCCATTCTCTCCT 1560 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ATCCCAAAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTC 236 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TTCGCAGAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTC 1620 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 TGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGC 296 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGC 1680 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 ACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGAT 356 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 ACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGAT 1740 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 TTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAAC 416 consensus_10490#2 ------------------------------------------------------------ consensus_10490#0 TTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAAC 1800 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 GAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCC-GTGTACTGA 475 consensus_10490#2 ---------------------------------------GCCCCACCTNCCGTGTACTGA 21 consensus_10490#0 GAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCC-GTGTACTGA 1859 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 GAAAGATTTCTAAGGTTCATTCAACAACCATGCCTGAAGCTCCCTTTTCCAGTGCAGCAA 535 consensus_10490#2 GAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAA 81 consensus_10490#0 GAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAA 1919 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 CTATGGTTCCTGTCATCTGTAACCCTCCATTGTTTGGCCTTACCCAAAAAGGGCATGGTG 595 consensus_10490#2 CTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTG 141 consensus_10490#0 CTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTG 1979 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 TTCATACATCAAGTATGATGTGTTCACCACCCAATGTAGTTCTCCATGGTCCTGATCCCC 655 consensus_10490#2 TTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACC 201 consensus_10490#0 TTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACC 2039 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 CTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAA 715 consensus_10490#2 CTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAA 261 consensus_10490#0 CTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAA 2099 consensus_10490#3 ------------------------------------------------------------ consensus_10490#1 GAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAG 775 consensus_10490#2 GAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAG 321 consensus_10490#0 GAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAG 2159 consensus_10490#3 --------------------------------------------AGCATCATCACCCACA 16 ************** consensus_10490#1 CAGCAGATACACTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGAACCGTAGAA 835 consensus_10490#2 CAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAA 381 consensus_10490#0 CAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAGAACCGTAGAA 2219 consensus_10490#3 GCCCAGATACCCTCGTGGCGTTATCAGCCCCCGGTGAGAAAGGCTGGTAGA-CCGTAGAA 75 ******* ******************* ******************** ******** consensus_10490#1 GAGTTATGGTTCATTTGTTACTCA-GGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAA 894 consensus_10490#2 GAGTTATGGTTCATTTGTTACTCG-GGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAA 440 consensus_10490#0 GAGTTATGGTTCATTTGTTACTCA-GGTGTTTGTCGCTCCACTGTAAATAAGTGGAGGAA 2278 consensus_10490#3 GA-TTATGGTTCATTTGTTACTCACGGTGTTTGTCGCTCCCCTGTAAATAAGTGGAGGAA 134 ** ******************** *************** ******************* consensus_10490#1 TCCA-TCTTTTCCTCCCTTTGGCA-GCGCAAAT-TTCACCTTGTTAACTTCGATGGTTAT 951 consensus_10490#2 TCCA-TCTTTTCCTCCCTTTGGCA-GCGCAAAT-TTCACCTTGTTAACTTCGATGGCTAT 497 consensus_10490#0 TCCA-TCTTTTCCTCCCTTTGGCA-GCGCAAAT-TTCACCTTGTTAACTTCGATGGTTAT 2335 consensus_10490#3 TCCACTCTTTTCCTCCCTTTGGCACGCGCCAATGTTCCCCTTGTTAACTTCCATGGTTAT 194 **** ******************* **** *** *** ************* **** *** consensus_10490#1 TTTGCGGTGGTTAAGTAC-TGTTGCA--GTGTTGCTTCTATACTAACCCAGCCTGAAAGT 1008 consensus_10490#2 TTTGCGGTGGTTAAGTAC-TGTTGCA--GTGTTGCTTCTATACTAACCCAGCCTGAAAGT 554 consensus_10490#0 TCTGCAGTGGTTAAGTAC-TGTTGCA--GTGTTGCTTCTATACTAACCTGGCT----GGT 2388 consensus_10490#3 TCTCCCGTGGTTAAGTACCTGTTGCCACGTGTTGCTTCTATACTAACCTGGCTGGTTACT 254 * * * ************ ****** ******************** ** * consensus_10490#1 TGC-------TGAATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCA-GGTTAACAAGG 1060 consensus_10490#2 TGC-------TGAACGTTTAGAGCCCAAGCCCAAGCTTCAGTTTGTCA-GGTTAACAAGG 606 consensus_10490#0 TAC-------TCAA----CAGAGATTGTACATTTTGTACAGTTGGTCA-TGCTTTTTCAC 2436 consensus_10490#3 CACCCGAGATTGTACCTTTTGTACCCTTGGTCATGCTTT--TTCACCACTGTGTATATAC 312 * * * * * ** ** * consensus_10490#1 CTGTATCTAACATGTTGTCATTGTGCTTATC-TAGTTGAGAATGAACTGGAAAGTGG--A 1117 consensus_10490#2 CTGTATCTAACATGTTGTCATTGTGCTTATC-TAGTTGAGAATGAACTGGAAAGTGG--A 663 consensus_10490#0 ATGTGTATA-TACATTGAC-TGGCATATTTCATAGTAGTACATAAACCTGAAAGTTGCTG 2494 consensus_10490#3 CCTTGACTGGCATATTTTAGTAGTACCACTA--AACCCTGAAAGTTGCTGAATGTTCCAG 370 * * * ** * * * * * *** ** consensus_10490#1 AACCCTGAAATCCCAACTTAGAAACTTCTGTTAAAAAAAAAAAAAAA------------- 1164 consensus_10490#2 AAAAAAAAAAAA------------------------------------------------ 675 consensus_10490#0 AATGTTCAGAGCCCAAGCCCAAGCTTCAGTTTGTCAGGTTAACAAGGCTGTATCTAACAT 2554 consensus_10490#3 AGCCCACAGCCCACAGCTTCAGTTTGTCAGGTTAACCCAGGCTGTATCTAACACTGTTGT 430 * * consensus_10490#1 ------------------------------- consensus_10490#2 ------------------------------- consensus_10490#0 GTTGTCATTGTGCTTATCTAGTTGAGAATGA 2585 consensus_10490#3 CCTTGTGCTTAAAAAAAAAA----------- 450 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||