cluster # 10496

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Oryza sativa
cluster # 10496 cluster # 10496 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10496#0 length = 3189 sequences # 6

consensus_10496#1 length = 158 sequences # 1

consensusID : consensus_10496#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3189
fasta sequence

                              [CCTCCTCCTCCTCATCTCATCTCGCGATTGGTGAAATTCTAGGGTTGTGCGGATTTGCTCCCCCGGGCCAACCGGATCCAGGTCGACGAGCGCGCGCGCGCGAGGGGTCTTCAAAAGCGCTCTTCGGGATCGCGTTCGCGTGAGCGCCAGCTATACACTCACTCCGCCGCCGCGACGAACGACTTGGGGCTTCTCCGTTGGCTACTGCTATTGCAGGGTCTAGTCTGAAGTCTGAACATAAATGATGAATCTTCTCAGAATGTGGAAGTTTGAGCTCTAAATCCACTTGGTTTGTGAGGTGTTAAGAGCACTGGACAGTGATAGTTGTTACTGTGCAAAATGTTTTGGCACGTACCTGGAATCTCTGCTGCATCACCGGTGGATACTATTTTAGACAAGGAAAATTTCAAGTTGGAGGACCTTCTTGATGAGGATGAAATAATCCAGGAGTGCAAAGCACTAAACACCCGCCTAATCAATTTTCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCTGAAGATGCTGAAAAGAAGAGGATATTTCGATTTCCTTTTGTAGCTTGTGAAATATTTACATGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATCTCATGGACTTGCTTTTCTCCTACTTAAAACCTGACCGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAGGTCGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGGCCATCCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAACTTCTATAATGGAGGTGTTGATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGTTGACTCAATGCAATGGTTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCATCTGATTCTCCTGAGGTTCATGCAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCGCTTGCTACAAAAATATCCAGTGCAAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAAGATTCAAGGCCTAAATCGGTGTTGGTCCACTCATTGTCAGTGTGCATATCTTTGTTGGATCCTAAGAGACTTGTATTAGCTTCCTACCAAGTTTTCCGTAGTCAACTAAGCCATGCAACATTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCATGCTGGATAGCCTAGGTGATTTGTTGAAGCTGCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAACCTCCTCTAGGAAAGCAACGCTTGAAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATTGGAAGTGAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGATCTATTTTTTGAGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGTTCTTGTTTAGATAGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTTGTTACAAGAATTTTGGAAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGCACACGGTTCCTTTGGA-GGGGAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGCATATCTAACAAACTCATTCAGCTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAGCAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTGGCCGGCCAACAACACTGCAGGATCGAGGTAGGGACAGTGATGAAGAAGACTTTCGAGATAGGGACTACGATGTTGCTGCGCTTGCTAGCAATTTGAGTCAGGCATCTAAATATGGTATTTACAGTTATGAAGATATTGATGAGGATCAAGTACCACATGAGCGAGATGATGAGGACGTATATTTTGACGATGAATCTGCTGAAGTGGTTATTTCCTCTCTTCGTCTTGGTGATGAACATGACAGCAACTCCTTGTTTACAAATTCCAATTGGTTTGCATTTGGTGAGGATAAAGCACTGAACGGCGAGGTCAACCCAGAAGCTTCCCCATCCCCAAATTCAGAGATATCTTCTCCAAATGTTGATGATGAGAATGATGAAGTCATTCTTACTGAGGTTACAGATGGCAGAAAGGGTTCAGAGTCACTTTTAGCAGTCGACTTGAATGAAGAATCTAGTCACACAGGCTTGACAAATGTCTCCATTGATAAATTGGAAGATGACATCAGACCACCAACTCCAGATGTAAAAGAAAGCCCACCTGAATTTGTGGAATGGAGGGAGGAAGAAGCAGAACCTGCTGACGTACCTGAGAACGACACAGCAGTTCCAAATGGCGAGGTTGGTAGTGTGGATCAGATGGATGGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATTGAAGTTTTGTCTGGAACCTCGGTA-CCTGAGAGCACAATAGGAGAACTATTACCAGGTTCAACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCCCCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTCGTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAGTCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATGCATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCTTCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTTAAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATTGGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTGACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAATATTATTTTCCCATGTACTTCATGTGTTTTTCATGTTATCGATTTGATAATTTGTACG]

[+] EMBL AK066330             [CCTCCTCCTCCTCATCTCATCTCGCGATTGGTGAAATTCTAGGGTTGTGCGGATTTGCTCCCCCGGGCCAACCGGATCCAGGTCGACGAGCGCGCGCGCGCGAGGGGTCTTCAAAAGCGCTCTTCGGGATCGCGTTCGCGTGAGCGCCAGCTATACACTCACTCCGCCGCCGCGACGAACGACTTGGGGCTTCTCCGTTGGCTACTGCTATTGCAGGGTCTAGTCTGAAGTCTGAACATAAATGATGAATCTTCTCAGAATGTGGAAGTTTGAGCTCTAAATCCACTTGGTTTGTGAGGTGTTAAGAGCACTGGACAGTGATAGTTGTTACTGTGCAAAATGTTTTGGCACGTACCTGGAATCTCTGCTGCATCACCGGTGGATACTATTTTAGACAAGGAAAATTTCAAGTTGGAGGACCTTCTTGATGAGGATGAAATAATCCAGGAGTGCAAAGCACTAAACACCCGCCTAATCAATTTTCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCTGAAGATGCTGAAAAGAAGAGGATATTTCGATTTCCTTTTGTAGCTTGTGAAATATTTACATGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATCTCATGGACTTGCTTTTCTCCTACTTAAAACCTGACCGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAGGTCGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGGCCATCCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAACTTCTATAATGGAGGTGTTGATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGTTGACTCAATGCAATGGTTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCATCTGATTCTCCTGAGGTTCATGCAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCGCTTGCTACAAAAATATCCAGTGCAAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAAGATTCAAGGCCTAAATCGGTGTTGGTCCACTCATTGTCAGTGTGCATATCTTTGTTGGATCCTAAGAGACTTGTATTAGCTTCCTACCAAGTTTTCCGTAGTCAACTAAGCCATGCAACATTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCATGCTGGATAGCCTAGGTGATTTGTTGAAGCTGCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAACCTCCTCTAGGAAAGCAACGCTTGAAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATTGGAAGTGAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGATCTATTTTTTGAGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGTTCTTGTTTAGATAGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTTGTTACAAGAATTTTGGAAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGCACACGGTTCCTTTGGA GGGGAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGCATATCTAACAAACTCATTCAGCTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAGCAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAAAATGTTTACCAGTGGGCTTGTGGCCGGCCAACAACACTGCAGGATCGAGGTAGGGACAGTGATGAAGAAGACTTTCGAGATAGGGACTACGATGTTGCTGCGCTTGCTAGCAATTTGAGTCAGGCATCTAAATATGGTATTTACAGTTATGAAGATATTGATGAGGATCAAGTACCACATGAGCGAGATGATGAGGACGTATATTTTGACGATGAATCTGCTGAAGTGGTTATTTCCTCTCTTCGTCTTGGTGATGAACATGACAGCAACTCCTTGTTTACAAATTCCAATTGGTTTGCATTTGGTGAGGATAAAGCACTGAACGGCGAGGTCAACCCAGAAGCTTCCCCATCCCCAAATTCAGAGATATCTTCTCCAAATGTTGATGATGAGAATGATGAAGTCATTCTTACTGAGGTTACAGATGGCAGAAAGGGTTCAGAGTCACTTTTAGCAGTCGACTTGAATGAAGAATCTAGTCACACAGGCTTGACAAATGTCTCCATTGATAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C26042               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGCTGGATAGCCTAGGTGATTTGTTGAAGCTGCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAACCTCCTCTAGGAAAGCAACG TTGAAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATTGGAAGTGAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGATCTATTTTTTGAGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGTTCTTGTTTAGATAGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTTGTTACAAGAATTTTGGAAGCTGAGAAGAACTCTGCTCTATCAATAGANTTAACTAAGCACACGGTTCCTTTGGAGGGGGAGATTTACACCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB667511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGAACGGCGAGGTCAACCCAGAAGCTTCCCCATCCCCAAATTCAGAGATATCTTCTCCAAATGTTGATGATGAGAATGATGAAGTCATTCTTACTGAGGTTACAGATGGCAGAAAGGGTTCAGAGTCACTTTTAGCAGTCGACTTGAATGAAGAATCTAGTCACACAGGCTTGACAAATGTCTCCATTGATAAATTGGAAGATGACATCAGACCACCAACTCCAGATGTAAAAGAAAGCCCACCTGAATTTGTGGAATGGAGGGAGGAAGAAGCAGAACCTGCTGACGTACCTGAGAACGACACAGCAGTTCCAAATGGCGAGGTTGGTAGTGTGGATCAGATGGATGGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATTGAAGTTTTGTCTGGAACCTCGGTA CCTGAGAGCACAATAGGAGAACTATTACCAGGTTCAACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCCCCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTCGTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAGTCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATGCATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCTTCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTTAAACGCGTAGTGTGATC                                                                                                                                                                                                                                        ]
[-] EMBL CB667512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGGAAGAAGCAGAACCTGCTGACGTACCTGAGAACGACACAGCAGTTCCAAATGGCGAGGTTGGTAGTGTGGATCAGATGGATGGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATTGAAGTTTTGTCTGGAACCTCGGTA CCTGAGAGCACAATAGGAGAACTATTACCAGGTTCAACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCCCCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTCGTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAGTCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATGCATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCTTCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTTAAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATTGGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTGACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAATATTATTTTCCCATGTACTTCATGTGTTTTTCATGTTATCGATTTGATAATTTGTACG]
[+] EMBL AK062688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATTGAAGTTTTGTCTGGAACCTCGGTA CCTGAGAGCACAATAGGAGAACTATTACCAGGTTCAACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCCCCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTCGTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAGTCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATGCATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCTTCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTTAAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATTGGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTGACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAATATTAT                                                    ]
[+] EMBL AU092255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGTTGAAAGGGAGATTGAAGTTTTGTCTGGACCCTCGNTACCCTGAGAGCACAATAGGAGAACTATTACCAGGTTCAACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCCCCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTCGTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAGTCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATGCATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCTTCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTTAAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATTGGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTGACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAATATTATTTTCCCATGTACTTCATGTGTTTTTCAaaaaaaa                  ]




>consensus_10496#0
CCTCCTCCTCCTCATCTCATCTCGCGATTGGTGAAATTCTAGGGTTGTGCGGATTTGCTC
CCCCGGGCCAACCGGATCCAGGTCGACGAGCGCGCGCGCGCGAGGGGTCTTCAAAAGCGC
TCTTCGGGATCGCGTTCGCGTGAGCGCCAGCTATACACTCACTCCGCCGCCGCGACGAAC
GACTTGGGGCTTCTCCGTTGGCTACTGCTATTGCAGGGTCTAGTCTGAAGTCTGAACATA
AATGATGAATCTTCTCAGAATGTGGAAGTTTGAGCTCTAAATCCACTTGGTTTGTGAGGT
GTTAAGAGCACTGGACAGTGATAGTTGTTACTGTGCAAAATGTTTTGGCACGTACCTGGA
ATCTCTGCTGCATCACCGGTGGATACTATTTTAGACAAGGAAAATTTCAAGTTGGAGGAC
CTTCTTGATGAGGATGAAATAATCCAGGAGTGCAAAGCACTAAACACCCGCCTAATCAAT
TTTCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCT
GAAGATGCTGAAAAGAAGAGGATATTTCGATTTCCTTTTGTAGCTTGTGAAATATTTACA
TGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATCTCATGGACTTGCTT
TTCTCCTACTTAAAACCTGACCGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAG
GTCGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGGCCAT
CCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAACTTCTATAATGGAGGTGTTG
ATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGTTGACTCAATGCAATGG
TTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCATCTGATTCTCCT
GAGGTTCATGCAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCG
CTTGCTACAAAAATATCCAGTGCAAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAA
GATTCAAGGCCTAAATCGGTGTTGGTCCACTCATTGTCAGTGTGCATATCTTTGTTGGAT
CCTAAGAGACTTGTATTAGCTTCCTACCAAGTTTTCCGTAGTCAACTAAGCCATGCAACA
TTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCATGCTGGATAGCCTAGGTGATTTGTTG
AAGCTGCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAA
CCTCCTCTAGGAAAGCAACGCTTGAAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATT
GGAAGTGAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGAT
CTATTTTTTGAGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGT
TCTTGTTTAGATAGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTT
GTTACAAGAATTTTGGAAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGCAC
ACGGTTCCTTTGGAGGGGAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGC
ATATCTAACAAACTCATTCAGCTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAG
CAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAA
AATGTTTACCAGTGGGCTTGTGGCCGGCCAACAACACTGCAGGATCGAGGTAGGGACAGT
GATGAAGAAGACTTTCGAGATAGGGACTACGATGTTGCTGCGCTTGCTAGCAATTTGAGT
CAGGCATCTAAATATGGTATTTACAGTTATGAAGATATTGATGAGGATCAAGTACCACAT
GAGCGAGATGATGAGGACGTATATTTTGACGATGAATCTGCTGAAGTGGTTATTTCCTCT
CTTCGTCTTGGTGATGAACATGACAGCAACTCCTTGTTTACAAATTCCAATTGGTTTGCA
TTTGGTGAGGATAAAGCACTGAACGGCGAGGTCAACCCAGAAGCTTCCCCATCCCCAAAT
TCAGAGATATCTTCTCCAAATGTTGATGATGAGAATGATGAAGTCATTCTTACTGAGGTT
ACAGATGGCAGAAAGGGTTCAGAGTCACTTTTAGCAGTCGACTTGAATGAAGAATCTAGT
CACACAGGCTTGACAAATGTCTCCATTGATAAATTGGAAGATGACATCAGACCACCAACT
CCAGATGTAAAAGAAAGCCCACCTGAATTTGTGGAATGGAGGGAGGAAGAAGCAGAACCT
GCTGACGTACCTGAGAACGACACAGCAGTTCCAAATGGCGAGGTTGGTAGTGTGGATCAG
ATGGATGGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATT
GAAGTTTTGTCTGGAACCTCGGTACCTGAGAGCACAATAGGAGAACTATTACCAGGTTCA
ACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCC
CCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTC
GTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAG
TCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATG
CATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCT
TCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTT
AAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATT
GGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTT
GACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACT
AAGAACATCAATATTATTTTCCCATGTACTTCATGTGTTTTTCATGTTATCGATTTGATA
ATTTGTACG

consensusID : consensus_10496#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 158
fasta sequence

                              [GATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTNACTCGGATTCAGGCCGATGAATGTNATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAAAAAAAGAAAAAAAAAAAANAAAAAAAAAAA]

[+] EMBL AU093710             [GATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTNACTCGGATTCAGGCCGATGAATGTNATCATATTATTCATGATTTATTTTGTAAACAACTAAGAACATCAAAAAAAGAAAAAAAAAAAANAAAAAAAAAAA]




>consensus_10496#1
GATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTTNAC
TCGGATTCAGGCCGATGAATGTNATCATATTATTCATGATTTATTTTGTAAACAACTAAG
AACATCAAAAAAAGAAAAAAAAAAAANAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10496#0      CCTCCTCCTCCTCATCTCATCTCGCGATTGGTGAAATTCTAGGGTTGTGCGGATTTGCTC 60
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCCCGGGCCAACCGGATCCAGGTCGACGAGCGCGCGCGCGCGAGGGGTCTTCAAAAGCGC 120
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TCTTCGGGATCGCGTTCGCGTGAGCGCCAGCTATACACTCACTCCGCCGCCGCGACGAAC 180
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GACTTGGGGCTTCTCCGTTGGCTACTGCTATTGCAGGGTCTAGTCTGAAGTCTGAACATA 240
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      AATGATGAATCTTCTCAGAATGTGGAAGTTTGAGCTCTAAATCCACTTGGTTTGTGAGGT 300
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GTTAAGAGCACTGGACAGTGATAGTTGTTACTGTGCAAAATGTTTTGGCACGTACCTGGA 360
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ATCTCTGCTGCATCACCGGTGGATACTATTTTAGACAAGGAAAATTTCAAGTTGGAGGAC 420
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CTTCTTGATGAGGATGAAATAATCCAGGAGTGCAAAGCACTAAACACCCGCCTAATCAAT 480
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TTTCTGCGGGACAAAGTTCAAGTGGAGCAATTACTCCACTACATTGTCGAAGAGGCACCT 540
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GAAGATGCTGAAAAGAAGAGGATATTTCGATTTCCTTTTGTAGCTTGTGAAATATTTACA 600
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TGTGAAGTGGATGTCATAATGAAGACATTAGTGGAGAATGAAGATCTCATGGACTTGCTT 660
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TTCTCCTACTTAAAACCTGACCGACCTCATGGGACACTGTTGGCTGGTTACTTTTGTAAG 720
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GTCGTGATTTGCTTGATGCTGAGGAAGACTCTCCCATTCGTCAATTATGTGCAGGGCCAT 780
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCTGAAATAGTTAGCCAACTTGTTGACCTTATTGGTATAACTTCTATAATGGAGGTGTTG 840
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ATCCGCTTGATCGGTGCTGATGAAACTATGTATTCTGGTTATGTTGACTCAATGCAATGG 900
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TTGGATGACATAAAGGTCCTTGAGATGATTGTTGACAAGTTCAGTTCATCTGATTCTCCT 960
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GAGGTTCATGCAAACGCTGCTGAAATCCTTTGTGCGATAACTAGATATGCCCCACCAGCG 1020
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CTTGCTACAAAAATATCCAGTGCAAGTTTTGTGGCGAGACTATTTCACCATGCTTTTGAA 1080
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GATTCAAGGCCTAAATCGGTGTTGGTCCACTCATTGTCAGTGTGCATATCTTTGTTGGAT 1140
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCTAAGAGACTTGTATTAGCTTCCTACCAAGTTTTCCGTAGTCAACTAAGCCATGCAACA 1200
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TTGGTCACTGCAAGTCCAGAGACAGTTGGTGGCATGCTGGATAGCCTAGGTGATTTGTTG 1260
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      AAGCTGCTGGATGTTTCATCTGCTGAAAATGTTCTGCCAACGACATATGGAGTCTTACAA 1320
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCTCCTCTAGGAAAGCAACGCTTGAAGATTGTAGAGTTCATCTCCGTCCTGCTCTCAATT 1380
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GGAAGTGAAGCTGCTGAAATTCGATTGATCCATCTAGGAGCAATCAAGCGTGTCATAGAT 1440
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CTATTTTTTGAGTACCCTTTTAACAACTTTTTGCACCACCATGTGGAGAGCATCATCAGT 1500
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TCTTGTTTAGATAGTAAGCAGGATCAGCTGATCTGTCATGTTCTTGATGAGTGTAAGCTT 1560
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GTTACAAGAATTTTGGAAGCTGAGAAGAACTCTGCTCTATCAATAGATTTAACTAAGCAC 1620
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ACGGTTCCTTTGGAGGGGAGATTTACACCAAGGATCGGACTTGTTGGTCATATGACACGC 1680
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ATATCTAACAAACTCATTCAGCTGGCTAAGACCAACAGCATAATTCAATCACATTTGCAG 1740
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CAAAATTCTGGGTGGGCTGAGTGGCATGCTGGAACCCTAACTAGGTGTAACGCAGTAGAA 1800
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      AATGTTTACCAGTGGGCTTGTGGCCGGCCAACAACACTGCAGGATCGAGGTAGGGACAGT 1860
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GATGAAGAAGACTTTCGAGATAGGGACTACGATGTTGCTGCGCTTGCTAGCAATTTGAGT 1920
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CAGGCATCTAAATATGGTATTTACAGTTATGAAGATATTGATGAGGATCAAGTACCACAT 1980
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GAGCGAGATGATGAGGACGTATATTTTGACGATGAATCTGCTGAAGTGGTTATTTCCTCT 2040
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CTTCGTCTTGGTGATGAACATGACAGCAACTCCTTGTTTACAAATTCCAATTGGTTTGCA 2100
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TTTGGTGAGGATAAAGCACTGAACGGCGAGGTCAACCCAGAAGCTTCCCCATCCCCAAAT 2160
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TCAGAGATATCTTCTCCAAATGTTGATGATGAGAATGATGAAGTCATTCTTACTGAGGTT 2220
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ACAGATGGCAGAAAGGGTTCAGAGTCACTTTTAGCAGTCGACTTGAATGAAGAATCTAGT 2280
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CACACAGGCTTGACAAATGTCTCCATTGATAAATTGGAAGATGACATCAGACCACCAACT 2340
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCAGATGTAAAAGAAAGCCCACCTGAATTTGTGGAATGGAGGGAGGAAGAAGCAGAACCT 2400
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GCTGACGTACCTGAGAACGACACAGCAGTTCCAAATGGCGAGGTTGGTAGTGTGGATCAG 2460
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ATGGATGGAATTGAGGATGTTATGTCTGGCACAACTGAATTAAGAGTTGAAAAGGAGATT 2520
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GAAGTTTTGTCTGGAACCTCGGTACCTGAGAGCACAATAGGAGAACTATTACCAGGTTCA 2580
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      ACGGAAATTAGTACAACCAGGCACCCTGAACCAGTTGATGATAGGAATCCTATGGAGCCC 2640
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CCTATGGGTGAACAAAAAGCAGAAAGCTGATGAAAAATCAGGCGAAATAGAAACAGACTC 2700
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GTGGGAAAAGGTGGATGTCATAATGATGATTATGGATGTGCAGGATGCATGGGGAACAAG 2760
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TCAAACCATTCATTCATGTATAATAGAACTGCTGATGTATTGATCTTCTGCCCCTGCATG 2820
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      CATCATACAACTGCTGACCATGCAGCATTCTCTCATGGAGCTGCTTAAGTTTTCATATCT 2880
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      TCGCCAATATGCTGGCAACATTCGAATGCGGAATGCTGAAAATAGCCAGCTCTCATTCTT 2940
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      AAACGCGTAGTGTGATCTGCAGTCTGCTCGTGTCACCGTGGTAAATACTAGTAACTGATT 3000
consensus_10496#1      ------------------------------------------------------------
                                                                                   

consensus_10496#0      GGTGATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTT 3060
consensus_10496#1      ---GATCTGTGGTTTCGATGCTTTAGTTTCTGTAGTTGGTGCTGTTAGCACAACAATTTT 57
                          *********************************************************

consensus_10496#0      GACTCGGATTCAGGCCGATGAATGTTATCATATTATTCATGATTTATTTTGTAAACAACT 3120
consensus_10496#1      NACTCGGATTCAGGCCGATGAATGTNATCATATTATTCATGATTTATTTTGTAAACAACT 117
                        ************************ **********************************

consensus_10496#0      AAGAACATCAATATTATTTTCCCATGTACTTCATGTGTTTTTCATGTTATCGATTTGATA 3180
consensus_10496#1      AAGAACATCAAAAAAAGAAAAAAAAAAAANAAAAAAAAAAA------------------- 158
                       *********** *  *       *   *    *                           

consensus_10496#0      ATTTGTACG 3189
consensus_10496#1      ---------