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Oryza sativa
cluster # 105 cluster # 105       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_105#0 length = 1266 sequences # 2  

consensusID : consensus_105#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1266
fasta sequence
                              [GCCACGGCGGCGATGACGCCTCCCTTCCGCCCGTCGCCCTCCGCCGGCTCCATCCCTCGTGGCTGCGGCGGCGACCGGTGCGCATCCGGCCGCGACGCCTGGCCCCTCCACCACGTCCGCCACGACGGCGTCTTCTGCCGCCTCTGCTCCTCCTGTGTCCTGCTCTATCACCCCGCCGCCTTCTGCTCCGCCTGCCTCCTCCTCTTCCCTCCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCACCGCCGTCCAGGAGCCCCGCCTCGATCCCATCCTCTCCCCGCCGGGACCTACCGCCGCTTGCTCCAGCTGCGGCCTCTTCGTCGCGCACCACTCCTGTGTCCCAGACTCTGCCTCCTTCGTCTGCCCCTCGTGCGCCGCCGCCGCCGAGGGCAAGCCCTTCTCCTACACGCCCGCGGGGGGCGGCCGGCGCGCGCTGGACGAGCGCGCCGCGCGAGTCCTCCTCGTCGCCGCGCGGCTGGCCCACGATTCAGTCGCTCGCGCCGCCGCCGCGGCCCGAGAGGATGCGGAGCGCTGCGTCCGGGAAGCGGCCGTGGCGCGGAAGCGCTCCCGCGAGATGCTTGACGCGGCCTTCCGCGCGCTTGAGGCGGAGGCCAGAGAAGCCAAGAAGCCCGCTGCCGCACCGCCGCCCAAGAAGAAGATTCCGAAGAGCAGCGAGGCAA-ACAGAGACAAGCTGCTCAAGTTCAATGCCATGCAGCAGCCGGCGCTGGCATTCGCCGCGGCTGCAGCTGCTGCAGCCAGCTCAATGCCATTGTCAATACCATCATCCAGGGAGGACAAGAAGCCAGTGAAACAGGAGGTTCAAGGTGAGCCAACATTGAACAGCATCAAAATGGGGAGCTAATTGTTCTTCACAGTGAATGGTATGCAGTTCTTGCAGGTTCAGCTGACAGATCATTGAAAGATGATCATGCCCCACTGTTTGGGACCTTGCAATCTTAGATTTGGCATGTCTATTCTGTTTTTTTTCTTCTTCTTCTTCCATGCCATTATGCTTCTTGTGTAGCAAGTGATTCTATTCCCAGAAGCACAAGTTCAGGTGTACAGAGGCTTGCAATGTAATTGAAACCCCAATTTGGAGCCTCCTCTTCACCTTAAATTCCTAGTGTTGATATGTTAGACGTTGATCCTTTCATCAATTGTAGCATGTTTGTATCATGTATCATGTTCGTTAATTACTTATTTATAGTGACAGAATATGTTGCCATTGGATGAATATTGTGCACCTAAAAAAAAAAAAAAA]

[+] EMBL AK110612             [GCCACGGCGGCGATGACGCCTCCCTTCCGCCCGTCGCCCTCCGCCGGCTCCATCCCTCGTGGCTGCGGCGGCGACCGGTGCGCATCCGGCCGCGACGCCTGGCCCCTCCACCACGTCCGCCACGACGGCGTCTTCTGCCGCCTCTGCTCCTCCTGTGTCCTGCTCTATCACCCCGCCGCCTTCTGCTCCGCCTGCCTCCTCCTCTTCCCTCCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGCCACCGCCGTCCAGGAGCCCCGCCTCGATCCCATCCTCTCCCCGCCGGGACCTACCGCCGCTTGCTCCAGCTGCGGCCTCTTCGTCGCGCACCACTCCTGTGTCCCAGACTCTGCCTCCTTCGTCTGCCCCTCGTGCGCCGCCGCCGCCGAGGGCAAGCCCTTCTCCTACACGCCCGCGGGGGGCGGCCGGCGCGCGCTGGACGAGCGCGCCGCGCGAGTCCTCCTCGTCGCCGCGCGGCTGGCCCACGATTCAGTCGCTCGCGCCGCCGCCGCGGCCCGAGAGGATGCGGAGCGCTGCGTCCGGGAAGCGGCCGTGGCGCGGAAGCGCTCCCGCGAGATGCTTGACGCGGCCTTCCGCGCGCTTGAGGCGGAGGCCAGAGAAGCCAAGAAGCCCGCTGCCGCACCGCCGCCCAAGAAGAAGATTCCGAAGAGCAGCGAGGCAA ACAGAGACAAGCTGCTCAAGTTCAATGCCATGCAGCAGCCGGCGCTGGCATTCGCCGCGGCTGCAGCTGCTGCAGCCAGCTCAATGCCATTGTCAATACCATCATCCAGGGAGGACAAGAAGCCAGTGAAACAGGAGGTTCAAGGTGAGCCAACATTGAACAGCATCAAAATGGGGAGCTAATTGTTCTTCACAGTGAATGGTATGCAGTTCTTGCAGGTTCAGCTGACAGATCATTGAAAGATGATCATGCCCCACTGTTTGGGACCTTGCAATCTTAGATTTGGCATGTCTATTCTGTTTTTTTTCTTCTTCTTCTTCCATGCCATTATGCTTCTTGTGTAGCAAGTGATTCTATTCCCAGAAGCACAAGTTCAGGTGTACAGAGGCTTGCAATGTAATTGAAACCCCAATTTGGAGCCTCCTCTTCACCTTAAATTCCTAGTGTTGATATGTTAGACGTTGATCCTTTCATCAATTGTAGCATGTTTGTATCATGTATCATGTTCGTTAATTACTTATTTATAGTGACAGAATATGTTG                                       ]
[-] EMBL CA761132             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAG A CGAGACAAGGGGGAGACAAGCTGCTCAAGTTCAATGCCATGCAGCAGCCGGCGCTGGCATTCGCCGCGGCTGCAGCTGCTGCAGCCAGCTCAATGCCATTGTCAATACCATCATCCAGGGAGGACAAGAAGCCAGTGAAACAGGAGGTTCAAGGTGAGCCAACATTGAACAGCATCAAAATGGGGAGCTAATTGTTCTTCACAGTGAATGGTATGCAGTTCTTGCAGGTTCAGCTGACAGATCATTGAAAGATGATCATGCCCCACTGTTTGGGACCTTGCAATTTTAGATTTGGCAGGTCTATTCTGTTTTTTTTCTTCTTCTTCTTCCATGCCATTATGCTTCTTGTGTAGCAAGTGATTCTATTCCCAGAAGCACAAGTTCAGGTGTACAGAGGCTTGCAATGTAATTGAAACCCCAATTTGGAGCCTCCTCTTCACCTTAAATTCCTAGTGTTGATATGTTAGACGTTGATCCTTTCATCAATTGTAGCATGTTTGTATCATGTATCATGTTCGTTAATTACTTATTTATAGTGACAGAATATGTTGCCATTGGATGAATATTGTGCACCTAAAAAAAAAAAAAAA]


>consensus_105#0 GCCACGGCGGCGATGACGCCTCCCTTCCGCCCGTCGCCCTCCGCCGGCTCCATCCCTCGT GGCTGCGGCGGCGACCGGTGCGCATCCGGCCGCGACGCCTGGCCCCTCCACCACGTCCGC CACGACGGCGTCTTCTGCCGCCTCTGCTCCTCCTGTGTCCTGCTCTATCACCCCGCCGCC TTCTGCTCCGCCTGCCTCCTCCTCTTCCCTCCCGCCTCCGCCTCCGCCTCCGCCTCCGCC GCCACCGCCGTCCAGGAGCCCCGCCTCGATCCCATCCTCTCCCCGCCGGGACCTACCGCC GCTTGCTCCAGCTGCGGCCTCTTCGTCGCGCACCACTCCTGTGTCCCAGACTCTGCCTCC TTCGTCTGCCCCTCGTGCGCCGCCGCCGCCGAGGGCAAGCCCTTCTCCTACACGCCCGCG GGGGGCGGCCGGCGCGCGCTGGACGAGCGCGCCGCGCGAGTCCTCCTCGTCGCCGCGCGG CTGGCCCACGATTCAGTCGCTCGCGCCGCCGCCGCGGCCCGAGAGGATGCGGAGCGCTGC GTCCGGGAAGCGGCCGTGGCGCGGAAGCGCTCCCGCGAGATGCTTGACGCGGCCTTCCGC GCGCTTGAGGCGGAGGCCAGAGAAGCCAAGAAGCCCGCTGCCGCACCGCCGCCCAAGAAG AAGATTCCGAAGAGCAGCGAGGCAAACAGAGACAAGCTGCTCAAGTTCAATGCCATGCAG CAGCCGGCGCTGGCATTCGCCGCGGCTGCAGCTGCTGCAGCCAGCTCAATGCCATTGTCA ATACCATCATCCAGGGAGGACAAGAAGCCAGTGAAACAGGAGGTTCAAGGTGAGCCAACA TTGAACAGCATCAAAATGGGGAGCTAATTGTTCTTCACAGTGAATGGTATGCAGTTCTTG CAGGTTCAGCTGACAGATCATTGAAAGATGATCATGCCCCACTGTTTGGGACCTTGCAAT CTTAGATTTGGCATGTCTATTCTGTTTTTTTTCTTCTTCTTCTTCCATGCCATTATGCTT CTTGTGTAGCAAGTGATTCTATTCCCAGAAGCACAAGTTCAGGTGTACAGAGGCTTGCAA TGTAATTGAAACCCCAATTTGGAGCCTCCTCTTCACCTTAAATTCCTAGTGTTGATATGT TAGACGTTGATCCTTTCATCAATTGTAGCATGTTTGTATCATGTATCATGTTCGTTAATT ACTTATTTATAGTGACAGAATATGTTGCCATTGGATGAATATTGTGCACCTAAAAAAAAA AAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)