These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10502#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3121 fasta sequence [CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG] [+] EMBL AK100742 [CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG] [+] EMBL AK066608 [CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAAAGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATAT GGGGGGGGGGGGGGGTCCGGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTGCAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTGCAGTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTGATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAGTGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAACATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTAC TTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACAATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG] [+] EMBL AK067307 [ TATTCGGGTATTTTGATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTCATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGACCGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGTGGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAGAGAAATGGGAAAATAGTGTAAAAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCGCTTGAACTCTTAGACTGATTACATAGACATATCTGCTCCAGTTGTTTTGAACTTCGAAGACACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCATTGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAACCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTGCCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCCTATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTGAATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTTATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTCTGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACCATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATTGGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAAGAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTCCATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTGTGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCTACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAAAGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACGATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATCACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCACTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGGGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG] [+] EMBL CB667301 [ AGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATTGGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCCGTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAATCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATTACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATTTTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGTATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAACTATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGTCTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCTAAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCCAGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGGTCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATTTG] consensusID : consensus_10502#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 568 fasta sequence [TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTNTATATACACAAAGTA] [+] EMBL CB641257 [TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTNTATATACACAAAGTA] [+] EMBL CB641245 [TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAAGTAAGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAGAATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAACCATAGTGACCATGGGCCAAAATTCCAGAAACTGATGAATACAATCAATGTAAACTCTGTAGCCGATCCTCATCGTCCTCTTGGTGGCTACAGC ] [+] EMBL CB641002 [taCATCCTCGTCCTCCTCCACCTCCGCCTACAGAACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCCATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGCGGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTACACGACTCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGAT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10502#0 CCAACCCAGCCAAAATGGCCAACGAGTCCATCCTCGTCCTCCTCCACCTCCGCCTACAGA 60 consensus_10502#1 --------------------------TCCATCCTCGTCCTCCTCCACCTCCGCCTACAGA 34 ********************************** consensus_10502#0 ACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCC 120 consensus_10502#1 ACCCTGACCGGGGTCTTCCCCAAAACCCTCGCCGAGTCGCCGGGCTCCGCCGCCGTCCCC 94 ************************************************************ consensus_10502#0 ATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGC 180 consensus_10502#1 ATCGCGAACTACTCGCAGGCTACTCCTCCGGCCATGAGGGGCTCGGATCCGGACCGGGGC 154 ************************************************************ consensus_10502#0 GGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGAC 240 consensus_10502#1 GGAGGCGAGCCGGACATCTCCAAGCTCTTCTGCCACTACAACGCCCTCTACTTCCACGAC 214 ************************************************************ consensus_10502#0 TCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGGTAA 300 consensus_10502#1 TCCCTCGGCACCTGCGCCGTCTCCTGGGCCACCGACGAGGATCCACTCCCCAATCGTGAA 274 ******************************************************** ** consensus_10502#0 AGCGTCGCCACTCCGAATTCTCGCCGTTCTCGGTGTTATATGGGGGGGGGGGGGGGGTCC 360 consensus_10502#1 GTAGGTGGCTGTGAATATTATCCTGGTGGTGGTGGCTGTATTATACTTCTTTCCAGATCC 334 * * * * *** ** ** * * * * *** * *** consensus_10502#0 GGTTTACTGAATACTGCGGATTTAGGTCTTGTGTGGATGTTGAGTTGTGTGCGGTGGTTG 420 consensus_10502#1 --TTGTATGAACACCACA----CAGATTT-----GGATTTAAA---GAATGCGCTGCTTC 380 ** **** ** * ** * * **** * * * **** ** ** consensus_10502#0 CAAGATTGCTCCGTTCATGTCCTGCCACTAAGCATGCGTATCTTAGTAGATTCAGTG-CA 479 consensus_10502#1 ATGAAATGATTCATGCTTATATGTGCATCAAAGATA---GTAATGATAACCATAGTGACC 437 * ** * * * * * * ** ** ** * * ** **** * consensus_10502#0 GTATGATGGCTTTATAGGGGGAACAGCACACGAGAACAATCCTGTTCTGTAGGGGTTCTG 539 consensus_10502#1 ATGGGCCAAAATTCCAGAAACTGATGAATACAATCA-ATTTAAACTCTGTAGCCGATCCT 496 * * ** ** * * ** * * * * ******* * ** consensus_10502#0 ATTCGGACATTCGGTATATGTTGGTTCACCCCGCATCAAATCCACTCATTCATCCACCAG 599 consensus_10502#1 CATCGTCCTCTTGGTGGCTACAGCATAACTGTGT------TCCATGAGATCAGAAAGAAA 550 *** * * *** * * * ** * **** *** * * consensus_10502#0 TGGATCAATGCCAAAAGGAAGTGCTTAACCCATATATCCCTTGTTCGTTAGAACTAGAAC 659 consensus_10502#1 TTN-TATATACACAAAGTA----------------------------------------- 568 * * ** * **** * consensus_10502#0 ATCAATCCCCTAAAAATGAATTAGGGCATCAAAGGGGATTATCCATATTCGGGTATTTTG 719 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATCTAAACGTTCAGCCAGAACATAGGTGATCCATATTATTCTACACGATTATGCCTTGTC 779 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATTATCTGCAGTTCTATCTGTTAACCTCTAAATCTTTGCGTCGTTCTCTTGTTCATTGAC 839 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CGTAAAAACTACACTCTTTGAGAGTATGGATCAATGCCTAGGTCTAAACCATGAAAAAGT 899 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GGAAAGATTTAATGTATGCTTTTGGCATGCTTTCTAGAAAGAAATGGGAAAATAGTGTAA 959 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AAACATTTACTTTTGGGAAGGAGTGAACAAATTTATCTAGACAGTAGAATGAAAAAGTCG 1019 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CTTGAACTCTTAGACTGATTACATAGACATCTCTGCTCCAGTTGTTTTGAACTTCGAAGA 1079 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CACTGGTATCATATCTATGGGCCTATTCATTCTGTTCATTTTGTTGCCACGTTCTACCAT 1139 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TGCTATTCTACCAAAATTGGTAGTTCTGAAAGTTTCCCATTCCCACTCATAATGACACAA 1199 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CCAAAATTTGGAAAGAAATCTAACAAAACACATCCAAGTATCCAACGCTACCAAAACTTG 1259 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CCACTTCCTACCCTGCCAAATTTTGGTAAGGTTGTTTTTGGCACCAAAGTGAACAAGCCC 1319 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TATATACTTCCCAAATATGTTTGATTTGCAAATCTATTGGTGAATGTGCATAGCATTTTG 1379 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AATGGAACACAGTGACTGATGTATTGCTATGCACAATTATGAAGTATGTCAGCCACATTT 1439 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATGGCACTGTCATGTGCATATTTTTCTAGCAAGCATGTTCAACAAGATTCGTGAGTTGTC 1499 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TGTCATAGTGTCATTTAGCTCATAATCGTCAACTATAATTGACTGGAAATGATGCTGACC 1559 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATCCGACCCTTCCATATTTTCATCTTAACACTATCTTTTTCACATAAACTCTGTACTATT 1619 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GGATAACTTTGTGAGTTATTGCCTATAATTGTTTTCTTCTATAGTTATTCTCTGAAATAA 1679 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GAAACTTTCATCAAAGACCATAGTACCTGCTATTACCAGTATGATTGTTTTGAAACTTTC 1739 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CATTTTTAATCATTTTGATGCAGTGAAGTAGGTGGCTGTGAATATTATCCTGGTGGTGGT 1799 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GGCTGTATTATACTTCTTTCCAGATCCTTGTATGAACACCACACAGATTTGGATTTAAAG 1859 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AATGCGCTGCTTCATGAAATGATTCATGCTTATATGTGCATCAAAGATAGTAATGATAAC 1919 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CATAGGTACTTTTTAGTACCATGACTGGCCTCTTCTTGTATTACACCTGAATTTCTGTCT 1979 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ACTTTTTTTTTTCTCGTTTTGACTAATTTAAAAACTGTGATCAAGCAGTGACCATGGGCC 2039 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AAAATTCCAGAAACTGATGAATACAATCAATTTAAACTCTGTAGCCGATCCTCATCGTCC 2099 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TCTTGGTGGCTACAGCATAACTGTGTTCCATGAGATCAGAAAGAAATTTTATATACACAA 2159 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AGTAAGAACCTGATCTTTAAAAGTAAATCTTATTTTCTAATTTCAGATTGGCAGCTAACA 2219 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATCTCTGTAGTGTGAAAGCTGTGGAGATTTGATCAAGTCAACCAAAATCAAAGGACCATC 2279 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ACAGGATGACTGCATTGAGGCAATGGGTGCTAATGACTTGTGTGACAGTTTAATTTGTCA 2339 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CTGGCATTGGTATTAGCTATATATTTCTTTGCATTTTTTTTGTTCCATGCATGCCTTATT 2399 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GGTATATCTCTAAAGGTGTGTTCGGAATCCCCAGTTCCCAACTCATCCATCTCGTTTTCC 2459 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 GTGCGCACGCTTTTCAAACTGTAAACAGTGCGTTTTTTACAAAAAGTTTCTATACGAAAG 2519 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TTGCTTTAAAAAATCATATTGATCCATTTTTTAAAAAAAGATTAGCTAATACTTAATTAA 2579 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TCATGCGCTAATGAACCGCTCCGTTTTCCGTGCGGAGGGGATAGGTTCCCATCCTCCATT 2639 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ACTGAACACAGCCTAAGAGTGCACATAAATATTCATAGAAATATAAGCTAGATGTACATT 2699 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TTAAAGCTAACTGTGTAATTTCCAAAATGTGTAATTTATTACTCTCTGCCTTGTTAGTGT 2759 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 ATCCTTGCAATGTGGGAGGTAGGATGTAAACCTCAGTTTGTGATGAACAAATAAATCAAC 2819 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TATTATTATTGTTAAATTTGACAAAGAGAGATGTTAAACTAAGAAGGTAATGATGGGTGT 2879 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 CTGCTTCAATATCTAACATTTTCTTTGTGTTGTCCTGTCACTTTGGCAATTGCATAATCT 2939 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AAAAAGTGGTAAATGATCTGACATAAATTTTTCTTTATTGGAGGTGAAATCGACATGTCC 2999 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 AGCAGCCAAACAAGATTAGTAATACCTGAACAACTATCATGCTCTTTCTCCTCCTTGGGG 3059 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TCCTGGGATGCAACTTACTCTAAATTTAGTGTCATTGAGTTCATGGATGGAGTCATGATT 3119 consensus_10502#1 ------------------------------------------------------------ consensus_10502#0 TG 3121 consensus_10502#1 -- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||