These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10521#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 906 fasta sequence [GACCTGACTGGACTGAAGGAGTAGAAAAACTTCTTGGAGGTCGGAGAGGAGGAGAGGTCGAGGAGCGAGGCGAGGATGGGGCGCAAGAGGAAGGAGCTGCTGTCGTCGGCGCCGTGGAGGACGGGGGAGGCGGCGGAGGACGATGACGAGGCGGCGAGGCTGTCCCGCGAGGGCAAGGTGAGCGTCACCAGCAACCCCGGCGAGACGCCCACCATGCACGTCCCGCGCAACAAGCGCCAGGACCTCGACCTCGCCGTCGACGACTTCGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCAGGTTTCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTCTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTCTGGCTTCTGTTTAAAAAGTTGAAAAGGGGAAATAATGGCGTGTAGTTCATTTCCTATTATGATTTCTGAATCAGTTTTTTTTTATCAATCTGAATTTAGATGTCATATTTTACAATCTTCAGTTTCTGCTGATCCTTCATGTCAGTTTGCTCACTGGGCATGTTATTTTTGGACGTCAATATAAAAAAATT] [+] EMBL CF326887 [GACCTGACTGGACTGAAGGAGTAGAAAAACTTCTTGGAGGTCGGAGAGGAGGATAGGTCGAGGAGCGAGGCGAGGATGGGGCGCAAGAGGAAGGAGCTGCTGTCGTCGGCGCCGTGGAGGACGGGGGAGGCGGCGGAGGACGATGACGAGGCGGCGAGGCTGTCCCGCGAGGGCAAGGTGAGCGTCACCAGCAACCCCGGCGAGACGCCCACCATGCACGTCCCGCGCAACAAGCGCCAGGACCTCGACCTCGCCGTCGACGACTTCGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCAGGTTTCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTCTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCG ] [+] EMBL AK070703 [ TTCTTGGAGGTCGGAGAGGAGGAGAGGTCGAGGAGCGAGGCGAGGATGGGGCGCAAGAGGAAGGAGCTGCTGTCGTCGGCGCCGTGGAGGACGGGGGAGGCGGCGGAGGACGATGACGAGGCGGCGAGGCTGTCCCGCGAGGGCAAGGTGAGCGTCACCAGCAACCCCGGCGAGACGCCCACCATGCACGTCCCGCGCAACAAGCGCCAGGACCTCGACCTCGCCGTCGACGACTTAGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCAGGTTTCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTCTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTCTGGCTTCTGTTTAAAAAGTTGAAAAGGGGAAATAATGGCGTGTAGTTCATTTCCTATTATGATTTCTGAATCAGTTTTTTTTTATCAATCTGAATTTAGATGTCATATTTTACAATCTTCAGTTTCTGCTGATCCTTCATGTCAGTTTGCTCACTGGGCATGTTATTTTTGGACGTCAATATAAAAAAATT] [+] EMBL AK059664 [ TCTTGGAGGTCGGAGAGGAGGAGAGGTCGAGGAGCGAGGCGAGGATGGGGCGCAAGAGGAAGGAGCTGCTGTCGTCGGCGCCGTGGAGGACGGGGGAGGCGGCGGAGGACGATGACGAGGCGGCGAGGCTGTCCCGCGAGGGCAAGGTGAGCGTCACCAGCAACCCCGGCGAGACGCCCACCATGCACGTCCCGCGCAACAAGCGCCAGGACCTCGACCTCGCCGTCGACGACTTCGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCAGGTTTCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTCTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTCTGGCTTCTGTTTAAAAAGT ] [+] EMBL C73537 [ AGGAGCGAGGCGAGGATGGGGCACAAGAGGAAGGAGCTGCTGTCGTCGGCGCCGTGGATGACGGGGGAGGCGGCGGAGGACGATGACGAGGCGGCGAGGCTGTCCCGCGANGGCAAGGTGAGCGTCACCAGCAACCCCGGCGAGACTCCCACCATGCACGTCCCGCGCAACAAGCGCCAGGACCTCGANCTCGCCGTCNACGACTTCGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCA GTTTCTGCGGAGAGTATTTAGTGT GNTACACTTGTCAAGCCTCTTCCTCCTGTGATGGNATACAGTGTTTCTCGCAATGTGNACTTGTTCTTCAA NT TTCACACAGTTCTGGGATG AGAGGGAATTGNCAATGCACAG AAT CCTTGGACTGGGGAATG ] [-] EMBL CB685305 [ ACAAGCGCCAGGACCTCGACCTCGCCGTTGACGACTTTGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGGGCAACTCCAGGTTTTTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTTTTCAAGATCTTCACACAGTTTTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTTTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTTTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTTAGGGTTCTGTTTAAAAAGTTGAA ] [+] EMBL CB685304 [ CAGGCCCTCGACCTCGCCGTCGACGACTTCGACGAGGACGAGATCGACCCCGAGCTCCGCTACTCCTTCCAGCGCAACTCCAGGTTTCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTCTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTCTGGCTTCTGTTTAAAAAGT ] [+] EMBL AU172685 [ TCTGCGGAGAGTATTTAGTGTGGATACACTTGTCAAGCCTCTTCCTCCTGTGATGGCATACAGTGTTTCTCGCAATGTGAACTTTTTCTTCAAGATCTTCACACAGTTNTGGGATGAAGAGGGAATTGCCAATGCACAGAAATCCCTTGGACTGGGGAATGAGGATGGCTCCCGGCGGCGTTGAATACCATTTTGTAGCAAAACCAAGCTATGCATTGAGAGATCTTACGCTAGATTCTGGAGGCCTTTGTTGTATGCCTCAAATGACACTTGGTGTGGTCTGTCTAAGTTTGGTTCTAGTGTTCGCGTCTTGCATTTTGTGCTAGTAAAGTTGGTTGCGTCATATATTCAGATGTTGTAAGCTTCGAGACTTGTACTCAGAAATCTCGTTCTGGCTTCTGTTTAAAAAGTTGAAAAGGGGAAAAAAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||