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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10527 cluster # 10527       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10527#0 length = 676 sequences # 7  

consensusID : consensus_10527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 676
fasta sequence
                              [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA-GGTGA-AACTACCTGTAATATTAGAAACATC-GACACA-GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA-AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AA752457             [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSAA31819            [                                                                                                        TGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGA                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062909             [                                                                                                                                                                                                            GCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTT                                                                          ]
[+] EMBL AU197487             [                                                                                                                                                                                                                                                                                                                         GAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA              ]
[+] EMBL BI795976             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTTCTGCTGTTCTGTCTGCTCTCTGCCACGGTGAGAACTACCTGGAATATTAGAAACATCTGACACACGGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTATAATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACCTTTGTTTGTCATCATATTCAAGATCCCCTTGTATTCCAAAAAAAAA                               ]
[+] EMBL CF327565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL OSAA31820            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACATTTGTTTGTCATCATATT                                                           ]


>consensus_10527#0 CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTG GGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATA GCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTC CTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAA GGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCAC CGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAAC AACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGA CCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCAGGTGAAACTA CCTGTAATATTAGAAACATCGACACAGGGGGATCCGTGGATTGCTGTCATAGGTTAGTTT TGGAGCGGTTTTGATGTAAATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACAT TTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)