These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 676 fasta sequence [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA-GGTGA-AACTACCTGTAATATTAGAAACATC-GACACA-GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA-AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AA752457 [CGAGCTCCGTGTTCTTCCCTACTGTGGCCACGGCTTTCACGTGGCCTGCATAGATATTTGGGTAGGGCACCATTCAACATGCCCAGTTTGGTAGAATTTCGTTGTGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCT ] [+] EMBL OSAA31819 [ TGCGACTACCCTGATAGCAAGCACACGATGTCTCCTGTACCAAGTGCAGTGATAATACCATTACCTCCATGTTCTCCTGAAGCATCAAGATCAGATCAATGCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGA ] [+] EMBL AK062909 [ GCAATTGCCTATTCGTCGGAACAGGTCATTCGCCAAGGACATCGCAGGTTCTCAGAAATGAACCTGACCAGGTGAATCGGACATTATATACTCCACCGGCGGAAGGGGGGAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTT ] [+] EMBL AU197487 [ GAATAGCTTGCCATCATCAGAAGTTAACCCCCCTGGTGAAAAATAACAACCAGCAAAAACAGTAGAGTCCTCATATTCATGACAGATCATGATCCACTAAGCTAGGACCCTGCAACTAGCTGCTTGAAATTTCTGCTGTTCTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL BI795976 [ AATTTCTGCTGTTCTGTCTGCTCTCTGCCACGGTGAGAACTACCTGGAATATTAGAAACATCTGACACACGGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTATAATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACCTTTGTTTGTCATCATATTCAAGATCCCCTTGTATTCCAAAAAAAAA ] [+] EMBL CF327565 [ CTGTCTGCTCTCTGCCA GGTGA AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGGTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTAAAGAAAACCACATTTGTTTGTCATCATATTCAAGATCCCATTGTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL OSAA31820 [ AACTACCTGTAATATTAGAAACATC GACACA GGGGGATCCGTGGATTGCTGTCATAGGTTAGTTTTGGAGCGTTTTTGATGTA AATATGAGAAACCGTTCAGGTTTCTTGTTAAGAAAACCACATTTGTTTGTCATCATATT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||