These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10529#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3553 fasta sequence [TGCTGCGGCCGAGCGGTGCGCGCTCGGCCTCGGCGTCCACGCGCGCCCCGCCTCGCCCTCGCCGGCGCTGCTCCCGCCGGCGGCTCTCCGCCGCGGCCGCCGCCTCCCCGCGGCCACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCTCCTGCATCTGAAAGCACTGTGACTACTAAAGTCCCAGAGGAACTTGTACAAGTCCAGGCTTACATAAGGTGGGAGAAAGCAGGCAAGCCAAATTATGCCCCAGAGAAGCAATTGGTCGAGTTTGAGGAAGCAAGGAAGGAACTGCAGTCTGAGTTGGATAAGGGGACCTCAGTTGAGCAGTTGAGGAACAAAATTTTGAAAGGGAACATTGAGACAAAAGTTTCCAAGCAGCTGAAGGACAAAAAATACTTTTCTGTGGAAAGAATTCAGCGGAAAAAACGAGATATTGTGCAACTACTTAAAAAACACAAGCCTACTGTTATGGAAGCGCAAGTAGAGACTCCTAAACAACCCACTGTTCTGGATCTCTTCACAAAGTCATTACAGGAGCAGGATAACTGTGAGGTTCTAAGCAGAAAGCTTTTCAAGTTCGGTGACAAGGAGATACTGGGAATTACCACCGTTGCTCTAGGAAAAACCAAAGTTCACTTGGCAACAAACTATATGGAGCCACTTATACTTCACTGGGCGTTGTCAAAAGAGAATGGAGAGTGGCAGGCACCTCCCTCAAGCATATTGCCATCTGGTTCATCATTGCTAGACAAGGCATGTGAAACTTCATTCAGTGAATATGAATTGAATGGTCTGCATTGTCAGGTTGTTGAGATCGAGCTTGACGATGGTGGATACAAGCGGATGCCCTTTGTTCTCCGGTCTGGTGAAACATGGATGAAAAATAATGGCTCTGACTTTTACTTGGATTTCAGCACCAAAGTTGCAAAAAATACAAAGGATACTGGTGATGCTGGTAAAGGCACTGCTAAGGCCTTGCTTGAAAGAATAGCAGATCTAGAGGAAGATGCCCAACGATCTCTTATGCACAGATTCAATATTGCAGCAGATCTAGTTGACCAAGCAAGAGATAATGGATTATTGGGTATTATTGGAATTTTTGTTTGGATTAGGTTCATGGCTACAAGGCAACTAATATGGAACAAGAACTACAATGTGAAGCCACGTGAGATAAGCAAAGCACAAGATAGGTTTACAGATGATCTTGAGAATATGTACAGAACTTACCCACAATATCAGGAGATCTTAAGAATGATAATGTCTGCTGTTGGTCGGGGAGGTGAAGGTGATGTTGGTCAACGCATTCGTGATGAGATATTAGTAATCCAGAGAAATAATGACTGCAAAGGTGGAATGATGGAGGAGTGGCACCAGAAACTGCACAACAATACAAGCCCAGATGATGTAGTGATCTGCCAGGCCCTACTTGATTATATCAAGAGTGATTTTGATATTGGTGTTTACTGGGACACCTTGAAAAAAGATGGTATAACAAAAGAGCGTCTATTGAGCTATGATCGACCGATTCATTCAGAGCCAAATTTCAGGAGTGAACAGAAAGATGGCTTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGGTTATTGGAGGCTCGAGCTGAACTACACCCTTTGCTCCTTGGCTCTCCTGAACGCATGAAGGATCTTATCTTTTTAGACATTGCTCTTGATTCTACTTTCAGGACAGCAGTTGAAAGATCATATGAGGAGCTCAATAATGTAGAACCAGAGAAAATTATGTACTTCATCAGTCTTGTCCTTGAAAATCTTGCTTTATCCACCGACGACAATGAAGATATCCTATATTGCTTAAAGGGATGGAATCAAGCCTTGGAAATGGCTAAACAGAAAAACAACCAATGGGCTCTCTATGCTAAAGCATTTCTGGACAGAACCAGACTTGCCCTTGCAAGCAAGGGAGAACAATACTATAATTTGATGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] [+] EMBL CB644343 [TGCTGCGGCCGAGCGGTGCGCGCTCGGCCTCGGCGTCCACGCGCGCCCCGCCTCGCCCTCGCCGGCGCTGCTCCCGCCGGCGGCTCTCCGCCGCGGCCGCCGCCTCCCCGCGGCCACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCT ] [+] EMBL AK103463 [ CACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCTCCTGCATCTGAAAGCACTGTGACTACTAAAGTCCCAGAGGAACTTGTACAAGTCCAGGCTTACATAAGGTGGGAGAAAGCAGGCAAGCCAAATTATGCCCCAGAGAAGCAATTGGTCGAGTTTGAGGAAGCAAGGAAGGAACTGCAGTCTGAGTTGGATAAGGGGACCTCAGTTGAGCAGTTGAGGAACAAAATTTTGAAAGGGAACATTGAGACAAAAGTTTCCAAGCAGCTGAAGGACAAAAAATACTTTTCTGTGGAAAGAATTCAGCGGAAAAAACGAGATATTGTGCAACTACTTAAAAAACACAAGCCTACTGTTATGGAAGCGCAAGTAGAGACTCCTAAACAACCCACTGTTCTGGATCTCTTCACAAAGTCATTACAGGAGCAGGATAACTGTGAGGTTCTAAGCAGAAAGCTTTTCAAGTTCGGTGACAAGGAGATACTGGGAATTACCACCGTTGCTCTAGGAAAAACCAAAGTTCACTTGGCAACAAACTATATGGAGCCACTTATACTTCACTGGGCGTTGTCAAAAGAGAATGGAGAGTGGCAGGCACCTCCCTCAAGCATATTGCCATCTGGTTCATCATTGCTAGACAAGGCATGTGAAACTTCATTCAGTGAATATGAATTGAATGGTCTGCATTGTCAGGTTGTTGAGATCGAGCTTGACGATGGTGGATACAAGCGGATGCCCTTTGTTCTCCGGTCTGGTGAAACATGGATGAAAAATAATGGCTCTGACTTTTACTTGGATTTCAGCACCAAAGTTGCAAAAAATACAAAGGATACTGGTGATGCTGGTAAAGGCACTGCTAAGGCCTTGCTTGAAAGAATAGCAGATCTAGAGGAAGATGCCCAACGATCTCTTATGCACAGATTCAATATTGCAGCAGATCTAGTTGACCAAGCAAGAGATAATGGATTATTGGGTATTATTGGAATTTTTGTTTGGATTAGGTTCATGGCTACAAGGCAACTAATATGGAACAAGAACTACAATGTGAAGCCACGTGAGATAAGCAAAGCACAAGATAGGTTTACAGATGATCTTGAGAATATGTACAGAACTTACCCACAATATCAGGAGATCTTAAGAATGATAATGTCTGCTGTTGGTCGGGGAGGTGAAGGTGATGTTGGTCAACGCATTCGTGATGAGATATTAGTAATCCAGAGAAATAATGACTGCAAAGGTGGAATGATGGAGGAGTGGCACCAGAAACTGCACAACAATACAAGCCCAGATGATGTAGTGATCTGCCAGGCCCTACTTGATTATATCAAGAGTGATTTTGATATTGGTGTTTACTGGGACACCTTGAAAAAAGATGGTATAACAAAAGAGCGTCTATTGAGCTATGATCGACCGATTCATTCAGAGCCAAATTTCAGGAGTGAACAGAAAGATGGCTTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGGTTATTGGAGGCTCGAGCTGAACTACACCCTTTGCTCCTTGGCTCTCCTGAACGCATGAAGGATCTTATCTTTTTAGACATTGCTCTTGATTCTACTTTCAGGACAGCAGTTGAAAGATCATATGAGGAGCTCAATAATGTAGAACCAGAGAAAATTATGTACTTCATCAGTCTTGTCCTTGAAAATCTTGCTTTATCCACCGACGACAATGAAGATATCCTATATTGCTTAAAGGGATGGAATCAAGCCTTGGAAATGGCTAAACAGAAAAACAACCAATGGGCTCTCTATGCTAAAGCATTTCTGGACAGAACCAGACTTGCCCTTGCAAGCAAGGGAGAACAATACTATAATTTGATGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] [+] EMBL CA755514 [ TTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGG ] [+] EMBL CB671798 [ TGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] [+] EMBL CB677190 [ GCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] [+] EMBL CB677107 [ GCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] [+] EMBL C71741 [ TGGCCAGGCAGTGCCATCTGTNTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTNTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCANTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||