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Oryza sativa
cluster # 10531 cluster # 10531       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10531#0 length = 843 sequences # 7  

consensusID : consensus_10531#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 843
fasta sequence
                              [ACGGCGACCTCATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC--TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT-AATGTAACATCCACAATTT--CGG---TTTTGTGACAATATGATGCTAGATTCTTGCTCTTTTGCTCAATTGTTCATCATGTCGGATGTGCCGTTGTTGTTAAATAGTTTTGGGATGTGCTGTTGTTGATGAACTAGTTTTGTGGTGCACAAACTTGCTCCAGTTTGTTGCTTAAAAAAAAAAAACACCAAAAAATTTAAACTAAACAAAAAACAACAAAAAAAAAAACC]

[+] EMBL AK100823             [ACGGCGACCTCATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC  TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT  CGG   TTTTGTGACAATATGATGCTAGATTCTTGC                                                                                                                                                                             ]
[+] EMBL BE230740             [       cgagATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGSCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGMCGCATCCGCCTCTCCCCCTCCCCTGMGGCGGCTGMRGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCMAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK060442             [                         CTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCCCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC  TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT  CGG   TTTTGTGACAATATGATGCTAGATTCTTGC                                                                                                                                                                             ]
[+] EMBL AK103131             [                           CGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC  TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT  CGG   TTTTGTGACAATATGATGCTAGA                                                                                                                                                                                    ]
[+] EMBL CA758783             [                                           CTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCGACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC  TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT  CGG   TTTTGTGACAATATGATGCTAGATTCTTGCTCTTTTGCTCAATTGTTCATCATGTCGGATGTGCCGTTGTTGTTAAATAGTTTTGGGATGTGCTGTTGTTGATGAACTAGTTTTGTGGTGCACAAACTTGCTCCAGTTTGTTGCTTAAAAAAAAAAAACACCAAAAAATTTAAACTAAACAAAAAACAACAAAAAAAAAAACC]
[+] EMBL AY224456             [                                                                                   GCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCAT                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI805962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTACCTTCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCTAAATGTAACATCCACATTTTTCCGGGTTTTTTGTGAC ATATGATGCTAGATTCTTGCTCTTTTGCTCAAa                                                                                                                                                                ]


>consensus_10531#0 ACGGCGACCTCATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGCC CCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCC TCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGG CGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCG TCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTC CCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGA TGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACT CCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGAT CCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATA ATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTACTCTAGATTATGTGTTATGTTG CCATCGATGTCGATCTCTAATGTAACATCCACAATTTCGGTTTTGTGACAATATGATGCT AGATTCTTGCTCTTTTGCTCAATTGTTCATCATGTCGGATGTGCCGTTGTTGTTAAATAG TTTTGGGATGTGCTGTTGTTGATGAACTAGTTTTGTGGTGCACAAACTTGCTCCAGTTTG TTGCTTAAAAAAAAAAAACACCAAAAAATTTAAACTAAACAAAAAACAACAAAAAAAAAA ACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)