These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10531#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 843 fasta sequence [ACGGCGACCTCATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC--TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT-AATGTAACATCCACAATTT--CGG---TTTTGTGACAATATGATGCTAGATTCTTGCTCTTTTGCTCAATTGTTCATCATGTCGGATGTGCCGTTGTTGTTAAATAGTTTTGGGATGTGCTGTTGTTGATGAACTAGTTTTGTGGTGCACAAACTTGCTCCAGTTTGTTGCTTAAAAAAAAAAAACACCAAAAAATTTAAACTAAACAAAAAACAACAAAAAAAAAAACC] [+] EMBL AK100823 [ACGGCGACCTCATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT CGG TTTTGTGACAATATGATGCTAGATTCTTGC ] [+] EMBL BE230740 [ cgagATCGGCTCATCCTCCTCGATTCCGGCGGCCGACTCAAATCCGAATCGSCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGMCGCATCCGCCTCTCCCCCTCCCCTGMGGCGGCTGMRGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCMAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTG ] [+] EMBL AK060442 [ CTCGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCCCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT CGG TTTTGTGACAATATGATGCTAGATTCTTGC ] [+] EMBL AK103131 [ CGATTCCGGCGGCCGACTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT CGG TTTTGTGACAATATGATGCTAGA ] [+] EMBL CA758783 [ CTCAAATCCGAATCGCCCCAAGAGAGAGAGAATGGCGGCGGCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCGACCACCCCATGGCCGCCTGACCTCACCGATCCGTCGTGCCGTGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTAC TCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCT AATGTAACATCCACAATTT CGG TTTTGTGACAATATGATGCTAGATTCTTGCTCTTTTGCTCAATTGTTCATCATGTCGGATGTGCCGTTGTTGTTAAATAGTTTTGGGATGTGCTGTTGTTGATGAACTAGTTTTGTGGTGCACAAACTTGCTCCAGTTTGTTGCTTAAAAAAAAAAAACACCAAAAAATTTAAACTAAACAAAAAACAACAAAAAAAAAAACC] [+] EMBL AY224456 [ GCGGCGCTCCGACCGGCGATCCTCCGCCGCATCCGCCTCTCCCCCTCCCCTGCGGCGGCTGCGGGGGCCGCGGCGGCGTCCCAGCCCCACGCCCTGGCGCGGTGGCTCGCGCGGCCCATGTCCTCCCACGACGCCCACCTCACCCGCGACGAGGTCGTCGACCGCCTCCTCGACGTCCTCAAGTGCCACCCCAAGGTTGACCCCTCCAAGGTGAGTCCCGAGGCGCACTTCGAGAAGGATCTGGGGCTGGACAGCCTGGACACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACCAGGAGGCCGACAAGATCGACTCCCTCCCGCTCGCCATCGAGTACGTCGCCAACCACCCCAT ] [+] EMBL BI805962 [ TGGTGAGGCTTTTCTTGATTTACTATTTTTGTTCTGCGGGGGATGAATAATTTTGCTGGAGTGGTTCAGGAAAACTTGTCCCTGGTACCTTCTAGATTATGTGTTATGTTGCCATCGATGTCGATCTCTAAATGTAACATCCACATTTTTCCGGGTTTTTTGTGAC ATATGATGCTAGATTCTTGCTCTTTTGCTCAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||