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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10550#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1782 fasta sequence
[AGCGATATACTCCATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAACGGTCTCAAAGAACCCAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATTGTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTGGGCGCGATCCCACCGGCGATGTCCGCCCACCTCCGCGTCGTGTCGCTCGACCTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCATCGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAGGAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGAGTATGAGGTGATCTTGAGGCTTTGAGCTCATGCTCATCGTCTCCATTATATTACCATTTCGGTGAATAAAAGGACTAATTCATTGATTTTTGTTTGTTTTATTTGAACCTTGAAGATTGCATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGAGAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCCCTTCCCCTCCACCGTTACATACCGGCGGCACGAAGCGGAGTGGATAGCAGCCGGTTTCCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTCCTGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCTCCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCTTGACGACAATGATATTGGTGTGTACAATAGATCCGACCGGTCCTTCGTGGCAGTGATGCAATGGCTTGACAAGCAGCCAAACAAATCTGTCATCTATGTTTCACTCGGGACCGAGGCACCTATCACAGCAGACCATATGCATGAGCTCGCATTTGGACTAGAGCTTGCTGGTGTGCGCTTCCTATGGGCACTCCGTCGTCCGAGTGGCATCAACTGCCACGACGACATGCTCCTCCCCAGTGGGTTCGAGACACGTGTTGCTGCACGTGGCTTAGTGTGCACGGAGTGGGTACCGCAGGTGCGCATGTTAGCGCATGGTGCAGTAGGTGTATTCTTAACACATTGCGGCTGGGGCTCCACCGTGGAGAGCTTCCACTATGGTCAGCCACTGGTGATGCTCCCTTTTATCGCTGACCAGGGCCTAATTGCTCAGGCGGTGGCGGCAACGGGGGTAGGTGTGGAGGTGGCGAGGAACTACGACGATGGCTCGTTCTACAGGGATGATGTTGCGGCGGCGATACAAAGGGTCATGGTGGAGGAGGAGGGGAAGGAATTGGCACACAAAGCCATAGAGTTGTGCGGCATCCTCGGGGATAGAGTCCAGCAGGAGATGTACCTTTATGAGCTTATCGGCTACTTACAGTGCTACAAATGATCATTGCTCACTATACTCTCGCGTCTATCACTCTATACCATGAATGGCCATGTTCTTGTGCCTACAATGAACAAATGTATTTTCACATCTTAATAAATTTCTATAGAAAACCATCAAAATTTAAAAGGAATA]
[+] EMBL AK061074 [AGCGATATACTCCATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAACGGTCTCAAAGAACCCAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATTGTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTGGGCGCGATCCCACCGGCGATGTCCGCCCACCTCCGCGTCGTGTCGCTCGACCTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCATCGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAGGAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGAGTATGAGGTGATCTTGAGGCTTTGAGCTCATGCTCATCGTCTCCATTATATTACCATTTCGGTGAATAAAAGGACTAATTCATTGATTTTTGTTTGTTTTATTTGAACCTTGAAGATTGCATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGAGAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCCCTTCCCCTCCACCGTTACATACCGGCGGCACGAAGCGGAGTGGATAGCAGCCGGTTTCCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTCCTGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCTCCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCTTGACGACAATGATATTGGTGTGTACAATAGATCCGACCGGTCCTTCGTGGCAGTGATGCAATGGCTTGACAAGCAGCCAAACAAATCTGTCATCTATGTTTCACTCGGGACCGAGGCACCTATCACAGCAGACCATATGCATGAGCTCGCATTTGGACTAGAGCTTGCTGGTGTGCGCTTCCTATGGGCACTCCGTCGTCCGAGTGGCATCAACTGCCACGACGACATGCTCCTCCCCAGTGGGTTCGAGACACGTGTTGCTGCACGTGGCTTAGTGTGCACGGAGTGGGTACCGCAGGTGCGCATGTTAGCGCATGGTGCAGTAGGTGTATTCTTAACACATTGCGGCTGGGGCTCCACCGTGGAGAGCTTCCACTATGGTCAGCCACTGGTGATGCTCCCTTTTATCGCTGACCAGGGCCTAATTGCTCAGGCGGTGGCGGCAACGGGGGTAGGTGTGGAGGTGGCGAGGAACTACGACGATGGCTCGTTCTACAGGGATGATGTTGCGGCGGCGATACAAAGGGTCATGGTGGAGGAGGAGGGGAAGGAATTGGCACACAAAGCCATAGAGTTGTGCGGCATCCTCGGGGATAGAGTCCAGCAGGAGATGTACCTTTATGAGCTTATCGGCTACTTACAGTGCTACAAATGATCATTGCTCACTATACTCTCGCGTCTATCACTCTATACCATGAATGGCCATGTTCTTGTGCCTACAATGAACAAATGTATTTTCACATCTTAATAAATTTCTATAGAAAACCATCA ]
[-] EMBL CB674903 [ AAATCTGTCATCTATGTTTCACTCGGGACCGAGGCACCTATCACAGCAGACCATATGCATGAGCTCGCATTTGGACTAGAGCTTGCTGGTGTGCGCTTCCTATGGGCACTCCGTCGTCCGAGTGGCATCAACTGCCACGACGACATGCTCCTCCCCAGTGGGTTCGAGACACGTGTTGCTGCACGTGGCTTAGTGTGCACGGAGTGGGTACCGCAGGTGCGCATGTTAGCGCATGGTGCAGTAGGTGTATTCTTAACACATTGCGGCTGGGGCTCCACCGTGGAGAGCTTCCACTATGGTCAGCCACTGGTGATGCTCCCTTTTATCGCTGACCAGGGCCTAATTGCTCAGGCGGTGGCGGCAACGGGGGTAGGTGTGGAGGTGGCGAGGAACTACGACGATGGCTCGTTCTACAGGGATGATGTTGCGGCGGCGATACAAAGGGTCATGGTGGAGGAGGAGGGGAAGGAATTGGCACACAAAGCCATAGAGTTGTGCGGCATCCTCGGGGATAGAGTCCAGCAGGAGATGTACCTTTATGAGCTTATCGGCTACTTACAGTGCTACAAATGATCATTGCTCACTATACTCTCGCGTCTATCACTCTATACCATGAATGGCCATGTTCTTGTGCCTACAATGAACAAATGTATTTTCACATCTTAATAAATTTCTATAGAAAACCATCAAAATTTAAAAGGAATA]
consensusID : consensus_10550#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1743 fasta sequence
[GTCAATTAATTCTCATTGAACAGATATATCAGCAGCCATGGCAGCGACCTCAGACTCGACGCCGGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTCCACTTCACATTGTGGTGTTCCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCCAGCCGCGGCCACGCCGTCACCTTCGTCACCACGCCGAGGAACGCCGCGAGGCTG-GGCGCGACCCCGCCGGCGCCGCTGTCGTCGTCCTCCCGCCTCCGCGTCGTGCCGCTCGACCTCCCGGCCGTCGACGGCCTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGCGCCCTTTGCCCGATTTGTTGCCGAGGCCTGCGCCGCCGGCGATGGGGAAGCCGTCACCGCCGCCGCCGAGTTCTTGAGGAAGCCCGACTGGATCATACCCGACTTCGCGCACAGCTGGATATGGCCGATTGCCGAGGAGCACAAGATCCCATATGCCACGTTTTTGATCGTTCCGGCGGCCTTGGTGGCCATCCTCGGCCCAAGAAGAGAGAATCTGACTCATCCACGCACCACGGCAGAGGACTACATGGTCCAGCCACCATGGATCCCCTTCCCCTCCAACATCGCCTACCGGCGGCGCCATGAGGCGGAGTGGATGGTAGCCGCCTTCAGAGCCAATGCCTCCGGCGTGTCTGATATGGATCGCTTCTGGGAGTCAGAGCAACATCCCAATTGCCGTCTCATCATCTATCGTACTTGTCCCGAGATAGAGCCACGGTTGTTCCCGCTCCTCACCGAGCTCTTCGCTAAGCCGGCTATCCCTGCTGGTCTCCTGATGTTCCCTGATACTATCAACAACGACGATGATGCTTCTGAACAATCCTTCGTTCCACCAACAATAGAGTGGCTCGACAAGCAGTCTGAGAAATCTGTCATCTATGTCGCTCTCGGGAGCGAGGCGCCATTGACAGAAGACCATGTGCGTGAGCTCGCTCTCGGGCTTGAGCTTGCCAATGTGCGCTTCCTCTGGGCGCTTCGCCCGCCGAGAGGCGACGGAGGCAGCAACGATGGTGGCGCGGCGGAGATCCTCCCGGATGGGTTCGAGTCACGCGTCGCCGCGCGAGGCATCGTGTGCACGCAGTGGGTGCCGCAGCTGCGCGTGCTGGCGCACCGTGCGGTTGGCGGGTTCCTGACGCACTGTGGCTGGGGCTCCACCATCGAGAGCTTCCAGTTCGGTCACCCACTCGTGATGCTTCCTTTCATTGTTGACCAGGGCCTAATCGCGGAGGCGATGGCAGCGAGGGGGATCGGTGTGGAGGTTGCAAGGAATGACGATGGGTTATTCCACAGGGACGATGTTGCGGCGGCCGTGCGGCGGGTGATGGTGGAAGAGGAGGGGAAGGTATTGGCACGCAAGGCCAAGGAGTTGAGCGACATTGTTGGAGATAGGGAGCAGCAGGAGATGTACCTGGATGAGCTTGTTGGTTACTTGCAGCTCTACAAATGACCAATCGCTCATCATGCATGTTCTCGAGTCTGACACTTCATCATGAATGATTCCTTTCTTGTGCCAGAGTGGTGGAATGTTTTTATTTTTTACATTTTAAATTGCAACATTACTCAATCACGTGTCTTCAGCTTTACTCCCTTGTGTAAAAAGAAAAGTGGCTATAAATCCAAACACAT]
[+] EMBL AK066462 [GTCAATTAATTCTCATTGAACAGATATATCAGCAGCCATGGCAGCGACCTCAGACTCGACGCCGGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTCCACTTCACATTGTGGTGTTCCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCCAGCCGCGGCCACGCCGTCACCTTCGTCACCACGCCGAGGAACGCCGCGAGGCTG GGCGCGACCCCGCCGGCGCCGCTGTCGTCGTCCTCCCGCCTCCGCGTCGTGCCGCTCGACCTCCCGGCCGTCGACGGCCTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGCGCCCTTTGCCCGATTTGTTGCCGAGGCCTGCGCCGCCGGCGATGGGGAAGCCGTCACCGCCGCCGCCGAGTTCTTGAGGAAGCCCGACTGGATCATACCCGACTTCGCGCACAGCTGGATATGGCCGATTGCCGAGGAGCACAAGATCCCATATGCCACGTTTTTGATCGTTCCGGCGGCCTTGGTGGCCATCCTCGGCCCAAGAAGAGAGAATCTGACTCATCCACGCACCACGGCAGAGGACTACATGGTCCAGCCACCATGGATCCCCTTCCCCTCCAACATCGCCTACCGGCGGCGCCATGAGGCGGAGTGGATGGTAGCCGCCTTCAGAGCCAATGCCTCCGGCGTGTCTGATATGGATCGCTTCTGGGAGTCAGAGCAACATCCCAATTGCCGTCTCATCATCTATCGTACTTGTCCCGAGATAGAGCCACGGTTGTTCCCGCTCCTCACCGAGCTCTTCGCTAAGCCGGCTATCCCTGCTGGTCTCCTGATGTTCCCTGATACTATCAACAACGACGATGATGCTTCTGAACAATCCTTCGTTCCACCAACAATAGAGTGGCTCGACAAGCAGTCTGAGAAATCTGTCATCTATGTCGCTCTCGGGAGCGAGGCGCCATTGACAGAAGACCATGTGCGTGAGCTCGCTCTCGGGCTTGAGCTTGCCAATGTGCGCTTCCTCTGGGCGCTTCGCCCGCCGAGAGGCGACGGAGGCAGCAACGATGGTGGCGCGGCGGAGATCCTCCCGGATGGGTTCGAGTCACGCGTCGCCGCGCGAGGCATCGTGTGCACGCAGTGGGTGCCGCAGCTGCGCGTGCTGGCGCACCGTGCGGTTGGCGGGTTCCTGACGCACTGTGGCTGGGGCTCCACCATCGAGAGCTTCCAGTTCGGTCACCCACTCGTGATGCTTCCTTTCATTGTTGACCAGGGCCTAATCGCGGAGGCGATGGCAGCGAGGGGGATCGGTGTGGAGGTTGCAAGGAATGACGATGGGTTATTCCACAGGGACGATGTTGCGGCGGCCGTGCGGCGGGTGATGGTGGAAGAGGAGGGGAAGGTATTGGCACGCAAGGCCAAGGAGTTGAGCGACATTGTTGGAGATAGGGAGCAGCAGGAGATGTACCTGGATGAGCTTGTTGGTTACTTGCAGCTCTACAAATGACCAATCGCTCATCATGCATGTTCTCGAGTCTGACACTTCATCATGAATGATTCCTTTCTTGTGCCAGAGTGGTGGAATGTTTTTATTTTTTACATTTTAAATTGCAACATTACTCAATCACGTGTCTTCAGCTTTACTCCCTTGTGTAAAAAGAAAAGTGGCTATAAATCCAAACACA ]
[+] EMBL AK099049 [ CAATTAATTCTCATTGAACAGATATATCAGCAGCCATGGCAGCGACCTCAGACTCGACGCCGGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTCCACTTCACATTGTGGTGTTCCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCCAGCCGCGGCCACGCCGTCACCTTCGTCACCACGCCGAGGAACGCCGCGAGGCTG GGCGCGACCCCGCCGGCGCCGCTGTCGTCGTCCTCCCGCCTCCGCGTCGTGCCGCTCGACCTCCCGGCCGTCGACGGCCTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGCGCCCTTTGCCCGATTTGTTGCCGAGGCCTGCGCCGCCGGCGATGGGGAAGCCGTCACCGCCGCCGCCGGGTTCTTGAGGAAGCCCGACTGGATCATACCCGACTTCGCGCACAGCTGGATATGGCCGATTGCCGAGGAGCACAAGATCCCATATGCCACGTTTTTGATCGTTCCGGCGGCCTTGGTGGCCATCCTCGGCCCAAGAAGAGAGAATCTGACTCATCCACGCACCACGGCAGAGGACTACATGGTCCAGCCACCATGGATCCCCTTCCCCTCCAACATCGCCTACCGGCGGCGCCATGAGGCGGAGTGGATGGTAGCCGCCTTCAGAGCCAATGCCTCCGGCGTGTCTGATATGGATCGCTTCTGGGAGTCAGAGCAACATCCCAATTGCCGTCTCATCATCTATCGTACTTGTCCCGAGATAGAGCCACGGTTGTTCCCGCTCCTCACCGAGCTCTTCGCTAAGCCGGCTATCCCTGCTGGTCTCCTGATGTTCCCTGATACTATCAACAACGACGATGATGCTTCTGAACAATCCTTCGTTCCACCAACAATAGAGTGGCTCGACAAGCAGTCTGAGAAATCTGTCATCTATGTCGCTCTCGGGAGCGAGGCGCCATTGACAGAAGACCATGTGCGTGAGCTCGCTCTCGGGCTTGAGCTTGCCAATGTGCGCTTCCTCTGGGCGCTTCGCCCGCCGAGAGGCGACGGAGGCAGCAACGATGGTGGCGCGGCGGAGATCCTCCCGGATGGGTTCGAGTCACGCGTCGCCGCGCGAGGCATCGTGTGCACGCAGTGGGTGCCGCAGCTGCGCGTGCTGGCGCACCGTGCGGTTGGCGGGTTCCTGACGCACTGTGGCTGGGGCTCCACCATCGAGAGCTTCCAGTTCGGTCACCCACTCGTGATGCTTCCTTTCATTGTTGACCAGGGCCTAATCGCGGAGGCGATGGCAGCGAGGGGGATCGGTGTGGAGGTTGCAAGGAATGACGATGGGTTATTCCACAGGGACGATGTTGCGGCGGCCGTGCGGCGGGTGATGGTGGAAGAGGAGGGGAAGGTATTGGCACGCAAGGCCAAGGAGTTGAGCGACATTGTTGGAGATAGGGAGCAGCAGGAGATGTACCTGGATGAGCTTGTTGGTTACTTGCAGCTCTACAAATGACCAATCGCTCATCATGCATGTTCTCGAGTCTGACACTTCATCATGAATGATTCCTTTCTTGTGCCAGAGTGGTGGAATGTTTTTATTTTTTACATTTTAAATTGCAACATTACTCAATCACGTGTCTTCAGCTTTACTCCCTTGTGTAAAAAGAAAAGTGGCTATAAATCCAAACACAT]
[+] EMBL OSS1531A [ ccgTTCTCATTGAACAGATATATCAGCAGCCATGGCAGCGACCTCAGACTCGACGCCGGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTCCACTTCANATTGTGGTGTTCCCATGGCTGGCCTTCGG CACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTNGCCANCCGGGGCCAAGGCGTCAACTTCGTCAACANGNCGAGGAACGCCGCGAGGTTGNGGCGCGANCCCGNCGGCGGCG ]
consensusID : consensus_10550#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 907 fasta sequence
[CTAAGAGCGATATACTCCATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAACGGTCTCAAAGAACCCAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATTGTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTGGGCGCGATCCCACCGGCGATGTCCGCCCACCTCCGCGTCGTGTCGCTCGACCTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCATCGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAGGAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGAGTATGAGATTGCATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGAGAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCCCTTCCCCTCCACCGTTACATACCGGCGGCACGAAGCGGAGTGGATAGCAGCCGGTTTCCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTCCTGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCTCCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCTTGACGACAATGATAT]
[+] EMBL AK105137 [CTAAGAGCGATATACTCCATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAACGGTCTCAAAGAACCCAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATTGTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTGGGCGCGATCCCACCGGCGATGTCCGCCCACCTCCGCGTCGTGTCGCTCGACCTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCATCGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAGGAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGAGTATGAGATTGCATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGAGAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCCCTTCCCCTCCACCGTTACATACCGGCGGCACGAAGCGGAGTGGATAGCAGCCGGTTTCCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTCCTGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCTCCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCTTGACGACAATGATAT]
[+] EMBL CB674902 [ GCCCCCCCTTCCTCCACTCCACATTGTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGGCTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTGGGCGCGATCCCACCGGCGATGTCCGCCCACCTCCGCGTCGTGTCGCTCGACCTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGAGAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCATCGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAGGAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGAGTATGAGATTGCATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGAGAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAACCAGCGTGGATCCCCTTCCCCTCCACCGTTACATACCGGCGGCACGAAGCGGAGTGGATAGCAGCCGGTTTCCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTCCTGCCGCCTCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10550#0 -----AGCGATATACTC-CATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAA 54
consensus_10550#2 CTAAGAGCGATATACTC-CATATTACTATTTCATCGAGAGTTTCGTTACATATCCAAAAA 59
consensus_10550#1 -----GTCAATTAATTCTCATTGAACAGATATATCAGCAGCCATGGCAGCGACCTCAGAC 55
* ** * ** *** ** * *** ** * * * * * *
consensus_10550#0 CGGTCTCAAAGAACC----CAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATT 110
consensus_10550#2 CGGTCTCAAAGAACC----CAACCATGGCAGCCACGCCCCCTCCTCCTCCACTCCACATT 115
consensus_10550#1 TCGACGCCGGCTGCTGCTGCTGCTGCTGCTGCTTCTTCTTCTTCTTCTCCACTTCACATT 115
* * * * * * ** ** * * ** ** ******* ******
consensus_10550#0 GTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGG 170
consensus_10550#2 GTGGTGTTTCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGG 175
consensus_10550#1 GTGGTGTTCCCATGGCTGGCCTTCGGCCACATGATCCCCTTCCTCGAGCTCTCCAAGCGG 175
******** ***************************************************
consensus_10550#0 CTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTG 230
consensus_10550#2 CTGGCGAGGCGAGGCCACGCCATCACCTTCGTCTCCACGCCGAGGAACGCTGGTAGGCTG 235
consensus_10550#1 CTGGCCAGCCGCGGCCACGCCGTCACCTTCGTCACCACGCCGAGGAACGCCGCGAGGCTG 235
***** ** ** ********* *********** **************** * ******
consensus_10550#0 GGCGCGATCCCACCGGCGATG---------TCCGCCCACCTCCGCGTCGTGTCGCTCGAC 281
consensus_10550#2 GGCGCGATCCCACCGGCGATG---------TCCGCCCACCTCCGCGTCGTGTCGCTCGAC 286
consensus_10550#1 GGCGCGACCCCGCCGGCGCCGCTGTCGTCGTCCTCCCGCCTCCGCGTCGTGCCGCTCGAC 295
******* *** ****** * *** *** ************* ********
consensus_10550#0 CTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGA 341
consensus_10550#2 CTCCCGGCAGTCGACGGCCTTGCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGA 346
consensus_10550#1 CTCCCGGCCGTCGACGGCCT-GCCGGAGGGCGCCGAGTCGACGGCCGACGTCCCGCCGGA 354
******** *********** ***************************************
consensus_10550#0 GAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCAT 401
consensus_10550#2 GAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGTGCCCTTCGCTAGCCTCAT 406
consensus_10550#1 GAAGGTCGGGCTCCTCAAGAAGGCGTTCGACGGCCTCGCCGCGCCCTTTGCCCGATTTGT 414
***************************************** ****** ** * * *
consensus_10550#0 CGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAG 461
consensus_10550#2 CGCCGAGGCCTGTGGCGGCGCCGCCGGTGATGGGGAAGAAGCCGCCGCTGGGTTCTCGAG 466
consensus_10550#1 TGCCGAGGCCTGCGCCGCCGGCGATGGGGAAGCCGTCACCGCCGCCGCCGAGTTCTTGAG 474
*********** * ** ** ** ** ** * * ******** * ***** ***
consensus_10550#0 GAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGA 521
consensus_10550#2 GAAGCCAGACTGGATCATACTCGACTTCGCGCAGAACTGGATATGGCCGACAGCCGAGGA 526
consensus_10550#1 GAAGCCCGACTGGATCATACCCGACTTCGCGCACAGCTGGATATGGCCGATTGCCGAGGA 534
****** ************* ************ * ************** ********
consensus_10550#0 GTATGAGGTGATCTTGAGGCTTTGAGCTCATGCTCATCGTCTCCATTATATTACCATTTC 581
consensus_10550#2 GTATGAG----------------------------------------------------- 533
consensus_10550#1 GCACAAG----------------------------------------------------- 541
* * **
consensus_10550#0 GGTGAATAAAAGGACTAATTCATTGATTTTTGTTTGTTTTATTTGAACCTTGAAGATTGC 641
consensus_10550#2 -------------------------------------------------------ATTGC 538
consensus_10550#1 -------------------------------------------------------ATCCC 546
** *
consensus_10550#0 ATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGA 701
consensus_10550#2 ATGTGCCATCTTCTCCATCTTCCCGGCGGCATTGGGGGCCTTCGTTGGCACGAAACAAGA 598
consensus_10550#1 ATATGCCACGTTTTTGATCGTTCCGGCGGCCTTGGTGGCCATCCTCGGCCCAAGAAGAGA 606
** ***** ** * *** * ******** **** **** ** * *** * * * ***
consensus_10550#0 GAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCC 761
consensus_10550#2 GAACCTAGCTCACCCGCGTACCACCACGGAAGACTACATGGCCCAGCCAGCGTGGATCCC 658
consensus_10550#1 GAATCTGACTCATCCACGCACCACGGCAGAGGACTACATGGTCCAGCCACCATGGATCCC 666
*** ** **** ** ** ***** * ** ********** ******* * ********
consensus_10550#0 CTTCCCCTCCACCGTTACATACCGGCGGCAC---GAAGCGGAGTGGATAGCAGCCGGTTT 818
consensus_10550#2 CTTCCCCTCCACCGTTACATACCGGCGGCAC---GAAGCGGAGTGGATAGCAGCCGGTTT 715
consensus_10550#1 CTTCCCCTCCAACATCGCCTACCGGCGGCGCCATGAGGCGGAGTGGATGGTAGCCGCCTT 726
*********** * * * ********** * ** *********** * ***** **
consensus_10550#0 CCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTC 878
consensus_10550#2 CCGGCCCAACGCCTCCGGTGTGTCCGATGCTGATCGTTTCTGGGACTCAGAGCGCCCCTC 775
consensus_10550#1 CAGAGCCAATGCCTCCGGCGTGTCTGATATGGATCGCTTCTGGGAGTCAGAGCAACATCC 786
* * **** ******** ***** *** ***** ******** ******* * *
consensus_10550#0 C---TGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCT 935
consensus_10550#2 C---TGCCGCCTCATCATCTACCGTAGTTGTCCCGAGGCAGAGCCGCGACTGTTCCCGCT 832
consensus_10550#1 CAATTGCCGTCTCATCATCTATCGTACTTGTCCCGAGATAGAGCCACGGTTGTTCCCGCT 846
* ***** *********** **** ********** ****** ** **********
consensus_10550#0 CCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCT 995
consensus_10550#2 CCTCACCAAGCTCTATACTAAGCCGGCCATCCCCTCCGGCCTCCTTGTGCCTCCCGCTCT 892
consensus_10550#1 CCTCACCGAGCTCTTCGCTAAGCCGGCTATCCCTGCTGGTCTCCTGATGTTCCCTGATAC 906
******* ****** ********** ***** * ** ***** ** ** * *
consensus_10550#0 TGACGACAATGATATTGGTGTGTACAATAGATCCGACCGGTCCTTCGTGGCAGTGATGCA 1055
consensus_10550#2 TGACGACAATGATAT--------------------------------------------- 907
consensus_10550#1 TATCAACAACGACGATGATGCTTCTGAACAATCC------TTCGTTCCACCAACAATAGA 960
* * **** **
consensus_10550#0 ATGGCTTGACAAGCAGCCAAACAAATCTGTCATCTATGTTTCACTCGGGACCGAGGCACC 1115
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 GTGGCTCGACAAGCAGTCTGAGAAATCTGTCATCTATGTCGCTCTCGGGAGCGAGGCGCC 1020
consensus_10550#0 TATCACAGCAGACCATATGCATGAGCTCGCATTTGGACTAGAGCTTGCTGGTGTGCGCTT 1175
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 ATTGACAGAAGACCATGTGCGTGAGCTCGCTCTCGGGCTTGAGCTTGCCAATGTGCGCTT 1080
consensus_10550#0 CCTATGGGCACTCCGTCGTCCGAGTGGCATCAACTGCCACGACGACAT------------ 1223
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 CCTCTGGGCGCTTCGCCCGCCGAGAGGCGACGGAGGCAGCAACGATGGTGGCGCGGCGGA 1140
consensus_10550#0 GCTCCTCCCCAGTGGGTTCGAGACACGTGTTGCTGCACGTGGCTTAGTGTGCACGGAGTG 1283
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 GATCCTCCCGGATGGGTTCGAGTCACGCGTCGCCGCGCGAGGCATCGTGTGCACGCAGTG 1200
consensus_10550#0 GGTACCGCAGGTGCGCATGTTAGCGCATGGTGCAGTAGGTGTATTCTTAACACATTGCGG 1343
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 GGTGCCGCAGCTGCGCGTGCTGGCGCACCGTGCGGTTGGCGGGTTCCTGACGCACTGTGG 1260
consensus_10550#0 CTGGGGCTCCACCGTGGAGAGCTTCCACTATGGTCAGCCACTGGTGATGCTCCCTTTTAT 1403
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 CTGGGGCTCCACCATCGAGAGCTTCCAGTTCGGTCACCCACTCGTGATGCTTCCTTTCAT 1320
consensus_10550#0 CGCTGACCAGGGCCTAATTGCTCAGGCGGTGGCGGCAACGGGGGTAGGTGTGGAGGTGGC 1463
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 TGTTGACCAGGGCCTAATCGCGGAGGCGATGGCAGCGAGGGGGATCGGTGTGGAGGTTGC 1380
consensus_10550#0 GAGGAACTACGACGATGGCTCGTTCTACAGGGATGATGTTGCGGCGGCGATACAAAGGGT 1523
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 AAGGAAT---GACGATGGGTTATTCCACAGGGACGATGTTGCGGCGGCCGTGCGGCGGGT 1437
consensus_10550#0 CATGGTGGAGGAGGAGGGGAAGGAATTGGCACACAAAGCCATAGAGTTGTGCGGCATCCT 1583
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 GATGGTGGAAGAGGAGGGGAAGGTATTGGCACGCAAGGCCAAGGAGTTGAGCGACATTGT 1497
consensus_10550#0 CGGGGATAGAGTCCAGCAGGAGATGTACCTTTATGAGCTTATCGGCTACTTACAGTGCTA 1643
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 TGGAGATAGGGAGCAGCAGGAGATGTACCTGGATGAGCTTGTTGGTTACTTGCAGCTCTA 1557
consensus_10550#0 CAAATGATCA-TTGCTCACTATACTC--TCGCGTCTATCACTCTATACCATGAATGGCCA 1700
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 CAAATGACCAATCGCTCATCATGCATGTTCTCGAGTCTGACACTTCATCATGAATGATTC 1617
consensus_10550#0 TGTTCTTGTGCCTACAATGAACAAATGTATTTTCACATCTTAAT--AAATTTCTATAGAA 1758
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 CTTTCTTGTGCC-AGAGTGGTGGAATGTTTTTATTTTTTACATTTTAAATTGCAACATTA 1676
consensus_10550#0 AACCATCAAAATTTAAAAGGAATA------------------------------------ 1782
consensus_10550#2 ------------------------------------------------------------
consensus_10550#1 CTCAATCACGTGTCTTCAGCTTTACTCCCTTGTGTAAAAAGAAAAGTGGCTATAAATCCA 1736
consensus_10550#0 -------
consensus_10550#2 -------
consensus_10550#1 AACACAT 1743
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||