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Oryza sativa
cluster # 10577 cluster # 10577       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10577#0 length = 1954 sequences # 3  
consensus_10577#1 length = 848 sequences # 2  
consensus_10577#2 length = 822 sequences # 2  

consensusID : consensus_10577#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1954
fasta sequence
                              [GAAATGATGACCTCCTCAGTAGGAATGATGACTTGATCAAGAAAATTGAAGATTCCGGTCAAGTTGTTGCTGAGCTCCAGGCAGCCTTAGAAAGAAGGGAAAGCGGCCAACTTAGAGGCAGAAAATCAAATTCTTCGCCAACAAGCAATTGCAACCCCCCCATCTACAGCCAAGTCTCAAGCTGCATTCTCTAAAATCAGTATGATCCATAGAAGTCCAGAAAATGGACATATTTTAAATGGCAACGTAGCATATGCTGAAAAGTCCTTGACTGGTCCAGCAGAAACAAGACCCTCTATGGTTGTTAACCAAGGTAGCATCCTCAATTTGATTAACCAAAAGGATTATGAAAGTGGAGATAAAATGCAAAGAGCACATAATGAAGTATATCAGCACCAGCAGCCCCAGGATGCTCAGCAGTTATTGCTTCAGTACATTACCCAGCACCTTGGATTCTCTGGTAGTAAACCTGTCGCTGCGCTTCTTTTATACCAATGCCTTCTTCATTGGAAATCGTTTGAAACAGCAAAAACAAGTGTCTTTGACAGTATCCTACAAGAGATAAACTCAGCAATAGAGCCACCTGGAATCCAGAATCATTACATTGTTATAATATTAACTGACATTCCTCTTACTTCAAGGCTCAACATGATACGAGAAGCCTGGCCTATTGGTTATCCAACCTGTCAACATTGTCAGTTCTCCTGCAACTCTCATTTAAAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTTTTCAAGCTAGTCAAATTTCAAATAGCGGACTTGCTTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGGCCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCATAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTCTGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGACTTCTGTTGCGCCGTGAATGTTGTTCGTTCAGCAACGGGGAGTATATCAGAGCTGGACTAACTCAAATAAAACATTGGTGCAATGATGTTAATCAAGAGTTTGCAGATTCAGCCTGGGAAGCACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGACATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCA-GCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGCCAACCATTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCAAAGCTTTGCGTTTATATTGCA-CA-GGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCTATGTGAAAAAGGAGCGCCTCTGTGTAGCGTGGATATCACACGTTATTCATGTTGTAGACTAGTAACCCATTTAGGAATCAAGAGCAATTGCAGCTGAGGGTTTCTAGGCCTCTCTGGTTTGAATGGTTGGTTAAGCAAACTGTACATGTTTTATCTGCAGTGTGTATAACACACGTTATTCATGTTGTAGACTAGTGA-CCCATTTATGAATTAAGAGCA]

[+] EMBL AK064553             [GAAATGATGACCTCCTCAGTAGGAATGATGACTTGATCAAGAAAATTGAAGATTCCGGTCAAGTTGTTGCTGAGCTCCAGGCAGCCTTAGAAAGAAGGGAAAGCGGCCAACTTAGAGGCAGAAAATCAAATTCTTCGCCAACAAGCAATTGCAACCCCCCCATCTACAGCCAAGTCTCAAGCTGCATTCTCTAAAATCAGTATGATCCATAGAAGTCCAGAAAATGGACATATTTTAAATGGCAACGTAGCATATGCTGAAAAGTCCTTGACTGGTCCAGCAGAAACAAGACCCTCTATGGTTGTTAACCAAGGTAGCATCCTCAATTTGATTAACCAAAAGGATTATGAAAGTGGAGATAAAATGCAAAGAGCACATAATGAAGTATATCAGCACCAGCAGCCCCAGGATGCTCAGCAGTTATTGCTTCAGTACATTACCCAGCACCTTGGATTCTCTGGTAGTAAACCTGTCGCTGCGCTTCTTTTATACCAATGCCTTCTTCATTGGAAATCGTTTGAAACAGCAAAAACAAGTGTCTTTGACAGTATCCTACAAGAGATAAACTCAGCAATAGAGCCACCTGGAATCCAGAATCATTACATTGTTATAATATTAACTGACATTCCTCTTACTTCAAGGCTCAACATGATACGAGAAGCCTGGCCTATTGGTTATCCAACCTGTCAACATTGTCAGTTCTCCTGCAACTCTCATTTAAAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTTTTCAAGCTAGTCAAATTTCAAATAGCGGACTTGCTTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGGCCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCATAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTCTGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGACTTCTGTTGCGCCGTGAATGTTGTTCGTTCAGCAACGGGGAGTATATCAGAGCTGGACTAACTCAAATAAAACATTGGTGCAATGATGTTAATCAAGAGTTTGCAGATTCAGCCTGGGAAGCACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGACATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCA GCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGCCAACCATTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCAAAGCTTTGCGTTTATATTGCA CA GGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCTATGTGAAAAAGGAGCGCCTCTGTGTAGCGTGGATATCACACGTTATTCATGTTGTAGACTAGTAACCCATTTAGGAATCAAGAGCAATTGCAGCTGAGGGTTTCTAGGCCTCTCTGGTTTGAATGGTTGGTTAAGCAAACTGTACATGTTTTATCTGCAGTGTGTATAACACACGTTATTCATGTTGTAGACTAGTGA CCCATTTATGAATTAAGAG  ]
[+] EMBL CB096449             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCA GCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGCCAACCATTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCAAAGCTTTGCGTTTATATTGCA CA GGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCTATGTGAAAAAGGAGCGCCTCTGTGTAGCGTGGATATTACACGTTATTCATGTTGTAGACTAGTAACCCATTTAGGAATCAAGAGCAATTGCAGCTGAGGGTTTCTAGGCCTCTCTGGTTTGAATGGTTGGTTAAGCAAACTGTACATGTTTTATCTGCAGTGTGTATAACACACGTTATTCATGTTGTAGACTAGTGACCCCATTTATGAATTAAGAGCA]
[+] EMBL BI806348             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ctGGATAATATGAATGCCACAANCATTA TTCA CAGAG TCACAT AA CATGAGAACTATGATGAAGGAGGAATC AATAAT CCACCACGCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGAT CC ACCCTTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCCAAGCTTTGCGTTTATATTGCACCACGGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCT                                                                                                                                                                                                                            ]


>consensus_10577#0 GAAATGATGACCTCCTCAGTAGGAATGATGACTTGATCAAGAAAATTGAAGATTCCGGTC AAGTTGTTGCTGAGCTCCAGGCAGCCTTAGAAAGAAGGGAAAGCGGCCAACTTAGAGGCA GAAAATCAAATTCTTCGCCAACAAGCAATTGCAACCCCCCCATCTACAGCCAAGTCTCAA GCTGCATTCTCTAAAATCAGTATGATCCATAGAAGTCCAGAAAATGGACATATTTTAAAT GGCAACGTAGCATATGCTGAAAAGTCCTTGACTGGTCCAGCAGAAACAAGACCCTCTATG GTTGTTAACCAAGGTAGCATCCTCAATTTGATTAACCAAAAGGATTATGAAAGTGGAGAT AAAATGCAAAGAGCACATAATGAAGTATATCAGCACCAGCAGCCCCAGGATGCTCAGCAG TTATTGCTTCAGTACATTACCCAGCACCTTGGATTCTCTGGTAGTAAACCTGTCGCTGCG CTTCTTTTATACCAATGCCTTCTTCATTGGAAATCGTTTGAAACAGCAAAAACAAGTGTC TTTGACAGTATCCTACAAGAGATAAACTCAGCAATAGAGCCACCTGGAATCCAGAATCAT TACATTGTTATAATATTAACTGACATTCCTCTTACTTCAAGGCTCAACATGATACGAGAA GCCTGGCCTATTGGTTATCCAACCTGTCAACATTGTCAGTTCTCCTGCAACTCTCATTTA AAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTT TTCAAGCTAGTCAAATTTCAAATAGCGGACTTGCTTATTTCAGTGCTCAACCGGTGGATG GGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGC TTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTA ACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGG CCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCA TAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTC TGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGAC TTCTGTTGCGCCGTGAATGTTGTTCGTTCAGCAACGGGGAGTATATCAGAGCTGGACTAA CTCAAATAAAACATTGGTGCAATGATGTTAATCAAGAGTTTGCAGATTCAGCCTGGGAAG CACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGA CATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTA TAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACAT CAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGT TGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGCCAACCA TTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCAAAGCTTTGCGT TTATATTGCACAGGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCTATGTG AAAAAGGAGCGCCTCTGTGTAGCGTGGATATCACACGTTATTCATGTTGTAGACTAGTAA CCCATTTAGGAATCAAGAGCAATTGCAGCTGAGGGTTTCTAGGCCTCTCTGGTTTGAATG GTTGGTTAAGCAAACTGTACATGTTTTATCTGCAGTGTGTATAACACACGTTATTCATGT TGTAGACTAGTGACCCATTTATGAATTAAGAGCA



consensusID : consensus_10577#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 848
fasta sequence
                              [GACAACCTGAAATAAAGCCCTCAACTGGCACATCAGAAACGATACCTTCAATAGGCAATCCTCCTGACTTGAATAATGAAAAACATGTTGAACAAGGAGAGAAACTACAAAAAGTACTTAATCAGAAATACCAGAGTCAGCAGCCTCAGGACGATCAGCAATGGTTACTCACTTGCATTTCACAATATCTTGGATTTTTCGGGAGCAAGCCTGTTGCTGCGCTTCTTATATATCAATGTCTCTCTCATTGGAGATCATTTGAAGCAATGAAGACTGGTGTCTTTGACAGCATCCTACAGGCTATAAATTCAGCAACCGAGGCCCAAAATGATACAAGAGCATTGGCCTATTGGTTATCCAACTTGTCTACATTAACAGTTCTCCTCCAGCGATCATTCAAAACTACTAGGACAGCAATCTCAACCCCACAAAGGCGAAGATTTTCATCTGAGAGGATCTTTCATGCAAGTCAAACTTCAAATGCTGGGCTTGCTTATCTCAGTGGCCAACCAGTTGTTGGAGCTGCTGGATTACCCCAAGTTGAGGCAAAATATCCAGCTTTGCTCTTCAAGCAACAGCTTGTGGATCTAATTGAGAAGGTTTATGGTATGATAAGTGACAGTGTGAAGAAGGAACTAAATCCATTGCTTGAATTGTGTATCCAGGATCCACGAACTTCTCACAGTCCAGCAAAAGGACATGCGAATGGCTTGGGGCAAAAAAATCAGCTTGGACATTGGTTGGCCATTGTAAAGGTCCTCACCAACTATTTGGATGTTCTAAGGGCAAACCATGTTCCATCAATTTTGGTGCACAAGCTATTCACACAGATATTTTCGCTGATTTGA]

[+] EMBL CB633578             [GACAACCTGAAATAAAGCCCTCAACTGGCACATCAGAAACGATACCTTCAATAGGCAATCCTCCTGACTTGAATAATGAAAAACATGTTGAACAAGGAGAGAAACTACAAAAAGTACTTAATCAGAAATACCAGAGTCAGCAGCCTCAGGACGATCAGCAATGGTTACTCACTTGCATTTCACAATATCTTGGATTTTTCGGGAGCAAGCCTGTTGCTGCGCTTCTTATATATCAATGTCTCTCTCATTGGAGATCATTTGAAGCAATGAAGACTGGTGTCTTTGACAGCATCCTACAGGCTATAAATTCAGCAACCGAGGCCCAAAATGATACAAGAGCATTGGCCTATTGGTTATCCAACTTGTCTACATTAACAGTTCTCCTCCAGCGATCATTCAAAACTACTAGGACAGCAATCTCAACCCCACAAAGGCGAAGATTTTCATCTGAGAGGATCTTTCATGCAAGTCAAACTTCAAATGCTGGGCTTGCTTATCTCAGTGGCCAACCAGTTGTTGGAGCTGCTGGATTACCCCAAGTTGAGGCAAAATATCCAGCTTTGCTCTTCAAGCAACAGCTTGTGGATCTAATTGAGAAGGTTTATGGTATGATAAGTGACAGTGTGAAGAAGGAACTAAATCCATTGCTTGAATTGTGTATCCAGGATCCACGAACTTCTCACAGTCCAGCAAAAGGACATGCGAATGGCTTGGGGCAAAAAAATCAGCTTGGACATTGGTTGGCCATTGTAAAGGTCCTCACCAACTATTTGGATGTTCTAAGGGCAAACCATGTTCCATCAATTTTGGTGCACAAGCTATTCACACAGATATTTTCGCTGATTTGA]
[+] EMBL CB634439             [GACAACCTGAAATAAAGCCCTCAACTGGCACATCAGAAACGATACCTTCAATAGGCAATCCTCCTGACTTGAATAATGACCAACATGTTGAACAAGGAGAGAAACTACAAAAAGTACTTAATCAGAAATACCAGAGTCAGCAGCCTCAGGACGATCAGCAATGGTTACTCACTTGCATTTCACAATATCTTGGATTTTTCGGGAGCAAGCCTGTTGCTGCGCTTCTTATATATCAATGTCTCTCTCATTGGAGATCATTTGAAGCAATGAAGACTGGTGTCTTTGACAGCATCCTACAGGCTATAAATTCAGCAACCGAGGCCCAAAATGATACAAGAGCATTGGCCTATTGGTTATCCAACTTGTCTACATTAACAGTTCTCCTCCAGCGATCATTCAAAACTACTAGGACAGCAATCTCAACCCCACAAAGGCGAAGATTTTCATCTGAGAGGATCTTTCATGCAAGTCAAACTTCAAATGCTGGGCTTGCTTATCTCAGTGGCCAACCAGTTGTTGGAGCTGCTGGATTACCCCAAGTTGAGGCAAAATATCCAGCTTTGCTCTTCAAGCAACAGCTTGTGGATCTAATTGAGAAGGTTTATGGTATGATAAGTGACAGTGTGAAGAAGGAACTAAATCCATTGCTTGAATTGTGTATCCAGGATCCACGAACTTCTCACAGTCCAGCAAAAGGACATGCGAATGGCTTGNGGCAAAAAAATCAGCTTGGACATTGGTTGGCCATTGTAAAGGTCCTCACNCACTATTTGGATGTTCTAAGGGCAAACCATGTTCCATCAATTTTGGTGCAC                                 ]


>consensus_10577#1 GACAACCTGAAATAAAGCCCTCAACTGGCACATCAGAAACGATACCTTCAATAGGCAATC CTCCTGACTTGAATAATGAAAAACATGTTGAACAAGGAGAGAAACTACAAAAAGTACTTA ATCAGAAATACCAGAGTCAGCAGCCTCAGGACGATCAGCAATGGTTACTCACTTGCATTT CACAATATCTTGGATTTTTCGGGAGCAAGCCTGTTGCTGCGCTTCTTATATATCAATGTC TCTCTCATTGGAGATCATTTGAAGCAATGAAGACTGGTGTCTTTGACAGCATCCTACAGG CTATAAATTCAGCAACCGAGGCCCAAAATGATACAAGAGCATTGGCCTATTGGTTATCCA ACTTGTCTACATTAACAGTTCTCCTCCAGCGATCATTCAAAACTACTAGGACAGCAATCT CAACCCCACAAAGGCGAAGATTTTCATCTGAGAGGATCTTTCATGCAAGTCAAACTTCAA ATGCTGGGCTTGCTTATCTCAGTGGCCAACCAGTTGTTGGAGCTGCTGGATTACCCCAAG TTGAGGCAAAATATCCAGCTTTGCTCTTCAAGCAACAGCTTGTGGATCTAATTGAGAAGG TTTATGGTATGATAAGTGACAGTGTGAAGAAGGAACTAAATCCATTGCTTGAATTGTGTA TCCAGGATCCACGAACTTCTCACAGTCCAGCAAAAGGACATGCGAATGGCTTGGGGCAAA AAAATCAGCTTGGACATTGGTTGGCCATTGTAAAGGTCCTCACCAACTATTTGGATGTTC TAAGGGCAAACCATGTTCCATCAATTTTGGTGCACAAGCTATTCACACAGATATTTTCGC TGATTTGA



consensusID : consensus_10577#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 822
fasta sequence
                              [GTCAGTTCTCCTGCAACTCTCATTTAAAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTTTTCAAGCTAGTCAAACTTCAAATAGCGGACTCGCTTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGGCCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCATAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTCTGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGAGTTTGCAGATTCAGCCTGGGAAGCACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGACATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGC]

[+] EMBL CB662503             [GTCAGTTCTCCTGCAACTCTCATTTAAAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTTTTCAAGCTAGTCAAACTTCAAATAGCGGACTCGCTTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGGCCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCATAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTCTGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGAGTTTGCAGATTCAGCCTGGGAAGCACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGACATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGTTGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGC]
[+] EMBL BE230748             [                                                                                                   AACTTC AATAGCGGACTTGCTTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGMTCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGMTCCAAGGACTTCTCACTCAAATCAAGCAAAGSCCTCACTATCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_10577#2 GTCAGTTCTCCTGCAACTCTCATTTAAAACCACCAGGGCAGCAATCTCAACCCCACATAG ACGGAGATTTTCCTACGAGAGGATTTTTCAAGCTAGTCAAACTTCAAATAGCGGACTCGC TTATTTCAGTGCTCAACCGGTGGATGGGCCTAGTGGATTGCAACAAATTGATGCAAAATA TCCAGCTTTGCTCTTCAAGCAGCAGCTTGTGGATCTGATTGAGAAGGTGTATGGAATGAT AAGTGACAAGGTGAAGAAGGAGCTTAACCCGTTACTTGAGTTGTGCATACAGGATCCAAG GACTTCTCACTCAAATCAAGCAAAGGCCTCACTATCATCTGCTAGTCACTTGGGCCAACA AAGCCAACTCACACACTGGTTGGGCATAGTGAAAATCCTCAACAACTGCTTGCATCTGCT AAGAGCAAATCATGTCCCATCAATTCTGATCCACAAGTTGCTTACCCAAATATTTTCTAT GGTCAATGTTCAACTATTTAATAGAGTTTGCAGATTCAGCCTGGGAAGCACTGAGGCATA TAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGACATGGAGTGAAA TATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTATAGTTGGCATGT ACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACATCAAGCATGAGAA CTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGTTGGATGACGATT CCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10577#0      GAAATGATGACCTCCTCAGTAGGAATGATGACTTGATCAAGAAAATTGAAGATTCCGGTC 60
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      AAGTTGTTGCTGAGCTCCAGGCAGCCTTAGAAAGAAGGGAAAGCGGCCAACTTAGAGGCA 120
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      GAAAATCAAATTCTTCGCCAACAAGCAATTGCAACCCCCCCATCTACAGCCAAGTCTCAA 180
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      GCTGCATTCTCTAAAATCAGTATGATCCATAGAAGTCCAGAAAATGGACATATTTTAAAT 240
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      GGCAACGTAGCATATGCTGAAAAGTCCTTGACTGGTCCAGCAGAAACAAGACCCTCTATG 300
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      GTTGTTAACCAAGGTAGCATCCTCAATTTGATTAACCAAAAGGATTATGAAAGTGGAGAT 360
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ---------------------GACAACCTGAAATAAAGCCCTCAACTGGCACATCAGAAA 39
                                                                                   

consensus_10577#0      AAAATGCAAAGAGCACATAATGAAGTATATCAGCACCAGCAGCCCCAGGATGCTCAGCAG 420
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      CGATACCTTCAATAGGCAATCCTCCTGACTTGAATAATGAAAAACATGTTGAACAAGGAG 99
                                                                                   

consensus_10577#0      TTATTGCTTCAGTACATTACCCAGCACCTTGGATTCTCTGGTAGTAAACCTGTCGCTGCG 480
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      AGAAACTACAAAAAGTACTTAATCAGAAATACCAGAGTCAGCAGCCTCAGGACGATCAGC 159
                                                                                   

consensus_10577#0      CTTCTTTTATACCAATGCCTTCTTCATTGGAAATCGTTTGAAACAGCAAAAACAAGTGTC 540
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      AATGGTTACTCACTTGCATTTCACAATATCTTGGATTTTTCGGGAGCAAGCCTGTTGCTG 219
                                                                                   

consensus_10577#0      TTTGACAGTATCCTACAAGAGATAAACTCAGCAATAGAGCCACCTGGAATCCAGAATCAT 600
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      CGCTTCTTATATATCAATGTCTCTCTCATTGGAGATCATTTGAAGCAATGAAGACTGGTG 279
                                                                                   

consensus_10577#0      TACATTGTTATAATATTAACTGACATTCCTCTTACTTCAAGGCTCAACATGATACGAGAA 660
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      TCTTTGACAGCATCCTACAGGCTATAAATTCAGCAACCGAGGCCCAAAATGATACAAGAG 339
                                                                                   

consensus_10577#0      GCCTGGCCTATTGGTTATCCAACCTGTCAACATTGTCAGTTCTCCTGCAACTCTCATTTA 720
consensus_10577#2      ----------------------------------GTCAGTTCTCCTGCAACTCTCATTTA 26
consensus_10577#1      CATTGGCCTATTGGTTATCCAACTTGTCTACATTAACAGTTCTCCTCCAGCGATCATTCA 399
                                                           ********** ** *  ***** *

consensus_10577#0      AAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTT 780
consensus_10577#2      AAACCACCAGGGCAGCAATCTCAACCCCACATAGACGGAGATTTTCCTACGAGAGGATTT 86
consensus_10577#1      AAACTACTAGGACAGCAATCTCAACCCCACAAAGGCGAAGATTTTCATCTGAGAGGATCT 459
                       **** ** *** ******************* ** ** ******** *  ******** *

consensus_10577#0      TTCAAGCTAGTCAAATTTCAAATAGCGGACTTGCTTATTTCAGTGCTCAACCGGTGGATG 840
consensus_10577#2      TTCAAGCTAGTCAAACTTCAAATAGCGGACTCGCTTATTTCAGTGCTCAACCGGTGGATG 146
consensus_10577#1      TTCATGCAAGTCAAACTTCAAATGCTGGGCTTGCTTATCTCAGTGGCCAACCAGTTGTTG 519
                       **** ** ******* *******   ** ** ****** ******  ***** ** * **

consensus_10577#0      GGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGC 900
consensus_10577#2      GGCCTAGTGGATTGCAACAAATTGATGCAAAATATCCAGCTTTGCTCTTCAAGCAGCAGC 206
consensus_10577#1      GAGCTGCTGGATTACCCCAAGTTGAGGCAAAATATCCAGCTTTGCTCTTCAAGCAACAGC 579
                       *  **  ****** *  *** **** ***************************** ****

consensus_10577#0      TTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTA 960
consensus_10577#2      TTGTGGATCTGATTGAGAAGGTGTATGGAATGATAAGTGACAAGGTGAAGAAGGAGCTTA 266
consensus_10577#1      TTGTGGATCTAATTGAGAAGGTTTATGGTATGATAAGTGACAGTGTGAAGAAGGAACTAA 639
                       ********** *********** ***** *************  *********** ** *

consensus_10577#0      ACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGG 1020
consensus_10577#2      ACCCGTTACTTGAGTTGTGCATACAGGATCCAAGGACTTCTCACTCAAATCAAGCAAAGG 326
consensus_10577#1      ATCCATTGCTTGAATTGTGTATCCAGGATCCACGAACTTCTCAC---AGTCCAGCAAAAG 696
                       * ** ** ***** ***** ** ********* * *********   * ** ****** *

consensus_10577#0      CCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCA 1080
consensus_10577#2      CCTCACTATCATCTGCTAGTCACTTGGGCCAACAAAGCCAACTCACACACTGGTTGGGCA 386
consensus_10577#1      G---------ACATGCGAATGGCTTGGGGCAAAAAAATCAGCTTGGACATTGGTTGGCCA 747
                                 *  *** * *  ****** *** ***  ** **   *** ******* **

consensus_10577#0      TAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTC 1140
consensus_10577#2      TAGTGAAAATCCTCAACAACTGCTTGCATCTGCTAAGAGCAAATCATGTCCCATCAATTC 446
consensus_10577#1      TTGTAAAGGTCCTCACCAACTATTTGGATGTTCTAAGGGCAAACCATGTTCCATCAATTT 807
                       * ** **  ****** *****  *** ** * ***** ***** ***** ********* 

consensus_10577#0      TGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGAC 1200
consensus_10577#2      TGATCCACAAGTTGCTTACCCAAATATTTTCTATGGTCAATGTTCAACTATTTAATAGA- 505
consensus_10577#1      TGGTGCACAAGCTATTCACACAGATATTTTCGCTGATTTGA------------------- 848
                       ** * ****** *  * ** ** ********  ** *                       

consensus_10577#0      TTCTGTTGCGCCGTGAATGTTGTTCGTTCAGCAACGGGGAGTATATCAGAGCTGGACTAA 1260
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      CTCAAATAAAACATTGGTGCAATGATGTTAATCAAGAGTTTGCAGATTCAGCCTGGGAAG 1320
consensus_10577#2      -------------------------------------GTTTGCAGATTCAGCCTGGGAAG 528
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      CACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGA 1380
consensus_10577#2      CACTGAGGCATATAAGACAAGCTGTTGATTTCTTGGTAATTTCGCTGAAGCCAATACGGA 588
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      CATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTA 1440
consensus_10577#2      CATGGAGTGAAATATGCGATGATGTTTGCCCAGCTCTCAGCTTACAGCAGCTTGAGCGTA 648
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      TAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACAT 1500
consensus_10577#2      TAGTTGGCATGTACTGGGATGATATGAATGGCACAAACATTATTTCAGCAGAGTTCACAT 708
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      CAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGT 1560
consensus_10577#2      CAAGCATGAGAACTATGATGAAGGAGGAATCAAATAATGCCACCAGCTTTTCTGTCCTGT 768
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      TGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGCCAACCA 1620
consensus_10577#2      TGGATGACGATTCCAGCATACCTTTTTCACTTGAAGACATTGCGAAGTCGATGC------ 822
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      TTGAGGAGACGACAGAGAATGACCTGCTACCTTTTGTCCGTGAAAACCAAAGCTTTGCGT 1680
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      TTATATTGCACAGGAGAGATTGAGTGGTTCCCTCTTCACAGATCATTCACCGGCTATGTG 1740
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      AAAAAGGAGCGCCTCTGTGTAGCGTGGATATCACACGTTATTCATGTTGTAGACTAGTAA 1800
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      CCCATTTAGGAATCAAGAGCAATTGCAGCTGAGGGTTTCTAGGCCTCTCTGGTTTGAATG 1860
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      GTTGGTTAAGCAAACTGTACATGTTTTATCTGCAGTGTGTATAACACACGTTATTCATGT 1920
consensus_10577#2      ------------------------------------------------------------
consensus_10577#1      ------------------------------------------------------------
                                                                                   

consensus_10577#0      TGTAGACTAGTGACCCATTTATGAATTAAGAGCA 1954
consensus_10577#2      ----------------------------------
consensus_10577#1      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)