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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2125 fasta sequence
[CCGAAAGCGAAAGCGGATCACAAGGGGGTAGCCCGTCACCATCAGCGCTCACGCCTCGCGCACCTGCGCTCTCCCTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGCGAACACGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCAGCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTGACTGATGCAATTACACCTCATGTACAACAGTTCTTTGATGCAAATCCAAACC-TAGAAAAGGTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGC-TTGGTTTGTCATGCCTATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGGAGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATT-GGAGGATCCTGCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGGCTGGATTCACCGCACCAAGCATATCAGCTTATCTTCCACAGGCATGGAGGGGTGCAATTGTTCTCTCTTTTGTCTGGTTCCTTCATAGGTGGAAAACAAACTTCATCACTAAAGTTGCTGCCTCAAGTATTGATCAAACCAGGTTGTCAGCATTTGATAAGATCTCGTCATTAGGACTGATTGCACTTGGAGTAATGGCTCTTGCAGAGGCTTGTGGTGTAGCTGCTCAGTCAATACTAACTATTGGTGGTGTGGGAGGTGTTGCTACTGCCTTTGCTGCTCGGGATGTCCTTGGTAACATGCTCAGTGGGTTCTCCTTACAGTTTTCTAGTCCATTCAGAGCTGGAGAATACATAAAGGCTGGGTCAATAGAAGGCAAGGTGATTGAAATAGGACTGACTTCTACGGAATTGATGAATCCAGAACAACTTCCTGTCACTGTACCCAACTCTCTGTTCTCCAGCCAGGTGATAGTGAACAGATCACGAGCTAAATGGCGATCCAATGTGACAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAAGTGAATTACGTTAGTCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAGTGCGAAGGCAAGGACGTCCTTTAGTCTTTTTGGTATCTTCAGATTTCAGACCCTCGACTCCATTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAGGTCAATTTCCAACTCTCTTTAACTTTCCCTTCGCTTGATATATCATCCGCTAATAGCCTAACAGAGAGAAGCACTGCCAATGAGCCACGGTAAACATTTTGGTCCGCATGCTGATAATGTGAGCGGGTAGTTTACCCCT]
[+] EMBL AK072398 [CCGAAAGCGAAAGCGGATCACAAGGGGGTAGCCCGTCACCATCAGCGCTCACGCCTCGCGCACCTGCGCTCTCCCTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGCGAACACGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCAGCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAGTGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTGACTGATGCAATTACACCTCATGTACAACAGTTCTTTGATGCAAATCCAAACC TAGAAAAGGTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGC TTGGTTTGTCATGCCTATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGGAGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATT GGAGGATCCTGCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGGCTGGATTCACCGCACCAAGCATATCAGCTTATCTTCCACAGGCATGGAGGGGTGCAATTGTTCTCTCTTTTGTCTGGTTCCTTCATAGGTGGAAAACAAACTTCATCACTAAAGTTGCTGCCTCAAGTATTGATCAAACCAGGTTGTCAGCATTTGATAAGATCTCGTCATTAGGACTGATTGCACTTGGAGTAATGGCTCTTGCAGAGGCTTGTGGTGTAGCTGCTCAGTCAATACTAACTATTGGTGGTGTGGGAGGTGTTGCTACTGCCTTTGCTGCTCGGGATGTCCTTGGTAACATGCTCAGTGGGTTCTCCTTACAGTTTTCTAGTCCATTCAGAGCTGGAGAATACATAAAGGCTGGGTCAATAGAAGGCAAGGTGATTGAAATAGGACTGACTTCTACGGAATTGATGAATCCAGAACAACTTCCTGTCACTGTACCCAACTCTCTGTTCTCCAGCCAGGTGATAGTGAACAGATCACGAGCTAAATGGCGATCCAATGTGACAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAAGTGAATTACGTTAGTCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAGTGCGAAGGCAAGGACGTCCTTTAGTCTTTTTGGTATCTTCAGATTTCAGACCCTCGACTCCATTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAGGTCAATTTCCAACTCTCTTTAACTTTCCCTTCGCTTGATATATCATCCGCTAATAGCCTAACAGAGAGAAGCACTGCCAATGAGCCACGGTAAACATTTTGGTCCGCATGCTGATAATGTGAGCGGGTAGTTTA ]
[+] EMBL CF306769 [ CGCTCACGCCTCGCGCACCTGCGCTCTCCCTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGCGAACGCGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCAGCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCANATGTACCTTCCACAGAAACCGTTGCGCTTGG ACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCA ]
[+] EMBL CF308111 [ CTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTGACTGATGCAATTACACCTCATGTACAACAGTTCCTTGATGCAAATCCAAACCNTAGAAAAGGTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGCNTTGGTTTGTCATGCCTATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGGAGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATTGGGAGGATCCTGCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGGCTGGATTCACCGCACCAAGCATAT ]
[+] EMBL AK104058 [ AAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAGGTGAATTACGTTAGTCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAGTGCGAAGGCAAGGACGTCCTTTAGTCTTTTTGGTATCTTCAGATTTCAGACCCTCGACTCCATTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAGGTCAATTTCCAACTCTCTTTAACTTTCCCTTCGCTTGATATATCATCCGCTAATAGCCTAACAGAGAGAAGCACTGCCAATGAGCCACGGTAAACATTTTGGTCCGCATGCTGATAATGTGAGCGGGTAGTTTACCCCT]
consensusID : consensus_10581#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[CATGGACTGAAAGGAGTAGAAACTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGCGAACGCGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCAGCAACTCTTCGTCGATCGCCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCCGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCANATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCA]
[+] EMBL CF329384 [CATGGACTGAAAGGAGTAGAAACTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGCGAACGCGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCAGCAACTCTTCGTCGATCGCCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTTGGACCTTGTGTATCTTCCGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCAAACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATGTCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCANATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGACAATGCTCGCA]
consensusID : consensus_10581#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 524 fasta sequence
[CAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAGGTGAATTACGTTAGTCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAGTGCGAAGGCAAGGACGTCCTTTAGTCTTTTTGGTATCTTCAGATTTCAGACCCTCGACTCCATTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAGGTCAATTTCCAACTCTCTTAAAAAAAAAAAAAAAAAAAACACTGTCA]
[-] EMBL CF308110 [CAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCAGAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAGGTGAATTACGTTAGTCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAGTGCGAAGGCAAGGACGTCCTTTAGTCTTTTTGGTATCTTCAGATTTCAGACCCTCGACTCCATTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAGGTCAATTTCCAACTCTCTTAAAAAAAAAAAAAAAAAAAACACTGTCA]
consensusID : consensus_10581#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence
[GAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAGGTAAGTGCAATTAATTTAGCTGTTGGGCCATGCAGATAATACTTTCCAAAACACAGTTCCGGCTGTTATAAGTTCACATCGAAACTGCTACTATGTTAAAAACACGTAGTTGTTCCCACTGTAGTTGTTCCACTTCTGTTCCCACATTACGTTCTTCCATTCCATTTGTCATTTAGCATCCGGCAGTTTCAAAACGAGTTTTTACATTTGAGTGCATATTTGTTCCCAAGTTTGCTTATTGTCAAAAAA]
[-] EMBL CF329385 [GAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACCAGCTCCTTATTGTTATCTTTCAAGATTGGAAAGTTCATATGGAGAGCTCACCATTGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCTACAACACAAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCACCACGCAGTGCTGCTGATTACGGTGCTTTTGGAAGTTCTAAGTAGGTAAGTGCAATTAATTTAGCTGTTGGGCCATGCAGATAATACTTTCCAAAACACAGTTCCGGCTGTTATAAGTTCACATCGAAACTGCTACTATGTTAAAAACACGTAGTTGTTCCCACTGTAGTTGTTCCACTTCTGTTCCCACATTACGTTCTTCCATTCCATTTGTCATTTAGCATCCGGCAGTTTCAAAACGAGTTTTTACATTTGAGTGCATATTTGTTCCCAAGTTTGCTTATTGTCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CCGAAAGCGAAAGCGGATCACAAGGGGGTAGCCCGTCACCATCAGCGCTCACGCCTCGCG 60
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CACCTGCGCTCTCCCTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGGTGGGGAGGAAGC 120
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GAACACGCCGCCGTCCGGGTCTCCTCCGCCTCCTCCTCCCGAGAATCGACTTCTATTTTG 180
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAATGTCTATGATAGCA 240
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GCAACTCTTCGTCGATCGTCTAGAGTAACTGGTAGTCAGAATATCATGGAGATATGTCTT 300
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GGACCTTGTGTATCTTCTGGTGCTTCTTCAAGGTGGTTCAGCAGCTGTACTAAGCACTCA 360
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 AACACTTCCATACTTAACCAGATCAAGGCAGTTGATCGGTATTCTCCAGTTAATGGTATG 420
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 TCAATGATCAGTAGGGTGCCTCTTTCAGCTCATATGGACACAAACTGGTTGTCTACTTCA 480
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 AATCCCAGATTTAATGCACTGCCAGGATTCTTAGGTGCTTCAAGCATCTGCCGAGCATAC 540
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 TCCTCAGACACTGGGATTAAGGCAGAAGTTCCACAGAATACTGTCTCAAATGTACCTTCC 600
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 ACAGAAACCGTTGCGCTTGGAACATCTGATGGTGGTAGTTCTTGGATTGATATCTTCGAC 660
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 AATGCTCGCAAGTGTACTCTAGATGCTACCACTGATGCAGGCAAGAAAGTTAAGGAGCTG 720
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 ACTGATGCAATTACACCTCATGTACAACAGTTCTTTGATGCAAATCCAAACCTAGAAAAG 780
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GTTGTGGTTCCACTTGGCGGGACAATCTTTGGTACAATGATGGCTTGGTTTGTCATGCCT 840
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 ATCGTTTTAAGGAGGATTCACAAGTATTCGATACAGAGTCCTATATCAGCACTTTTGGGG 900
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 AGCTCAACAAAGAATGATGTCTCGTATGAAACTAGCCTCTGGAGTGCATTGGAGGATCCT 960
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GCGAAATACCTTATCACATTTATGGCATTTTCAGAAATGGCTGGATTCACCGCACCAAGC 1020
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 ATATCAGCTTATCTTCCACAGGCATGGAGGGGTGCAATTGTTCTCTCTTTTGTCTGGTTC 1080
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CTTCATAGGTGGAAAACAAACTTCATCACTAAAGTTGCTGCCTCAAGTATTGATCAAACC 1140
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 AGGTTGTCAGCATTTGATAAGATCTCGTCATTAGGACTGATTGCACTTGGAGTAATGGCT 1200
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CTTGCAGAGGCTTGTGGTGTAGCTGCTCAGTCAATACTAACTATTGGTGGTGTGGGAGGT 1260
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GTTGCTACTGCCTTTGCTGCTCGGGATGTCCTTGGTAACATGCTCAGTGGGTTCTCCTTA 1320
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CAGTTTTCTAGTCCATTCAGAGCTGGAGAATACATAAAGGCTGGGTCAATAGAAGGCAAG 1380
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GTGATTGAAATAGGACTGACTTCTACGGAATTGATGAATCCAGAACAACTTCCTGTCACT 1440
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 GTACCCAACTCTCTGTTCTCCAGCCAGGTGATAGTGAACAGATCACGAGCTAAATGGCGA 1500
consensus_10581#1 ------------------------------------------------------------
consensus_10581#2 ----------CAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCA 50
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 TCCAATGTGACAAAGATTCCTATTAGAATTGAGGATATTGAAAAGGTTCCTGCCATATCA 1560
consensus_10581#1 ----CATGGACTGAAAGGAGTAGAAACTCCCCCTTCCCGGCCTAGGTGTCGGAAGCGCGG 56
consensus_10581#2 -GAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACC 109
consensus_10581#3 ----GAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACC 56
consensus_10581#0 -GAGGAGATAAAAGTTATGTTAAGGTCCAACCCAAAGGTTGTCTTAGACTCAGAAGCACC 1619
consensus_10581#1 TGGGGAGGAAGCGAACGCGCCGCCGTCCGGGTCTCCT-CCGCCTCCTCCTCCCGAGAATC 115
*** * * **** * * ** *** ** * *
consensus_10581#2 AGCTCCCTTATTGTTAT--CTTTCAAG--ATTGGAAAGTTCATATGGAGAGCT-CACCAT 164
consensus_10581#3 AGCTCC-TTATTGTTAT--CTTTCAAG--ATTGGAAAGTTCATATGGAGAGCT-CACCAT 110
consensus_10581#0 AGCTCC-TTATTGTTAT--CTTTCAAG--ATTGGAAAGTTCATATGGAGAGCT-CACCAT 1673
consensus_10581#1 GACTTCTATTTTGCCTCTGCATCCAGGTTATTTAGAACTCTGTATTCAGGACTGCACAAT 175
** * * *** * * ** * *** ** * *** ** ** *** **
consensus_10581#2 --------TGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCT--ACAACAC 214
consensus_10581#3 --------TGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCT--ACAACAC 160
consensus_10581#0 --------TGGATGCAACCTCACGAAAATGACAAAGGATGAGTGGCTGTCT--ACAACAC 1723
consensus_10581#1 GTCTATGATAGCAGCAACTCTTCGTCGATCGCCTAGAGTAACTGGTAGTCAGAATATCAT 235
* * ***** ** ** * ** * * *** *** * * **
consensus_10581#2 AAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCA 274
consensus_10581#3 AAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCA 220
consensus_10581#0 AAGGCATTCTTCTGGAGGCTGCTAAGATTATCAAGTTACATGGCGTTGAACTGGGAAGCA 1783
consensus_10581#1 GGAGATATGTCTTGGACCTTGTGTATCTTCCGGTGCTTCTTCAAGGTGG-TTCAGCAGCT 294
* * * **** ** * ** * * * * * ** * * ***
consensus_10581#2 CCACGCAGTGCTGCTG-ATTACGGTGCTTTTGGAAGTTCTAAGTAGGTGAATTACGTTAG 333
consensus_10581#3 CCACGCAGTGCTGCTG-ATTACGGTGCTTTTGGAAGTTCTAAGTAGGTAAGTGCAATTAA 279
consensus_10581#0 CCACGCAGTGCTGCTG-ATTACGGTGCTTTTGGAAGTTCTAAGTAAGTGAATTACGTTAG 1842
consensus_10581#1 GTACTAAGCACTCAAACACTTCCATACTTA-ACCAGATCAAGGCAGTTGATCGGTATTC- 352
** ** ** * * * * *** ** ** * * * * * **
consensus_10581#2 TCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAG----TGCGAAGG 389
consensus_10581#3 TTTAGCTGTTGGGCCATGCAGATAATACTTTCCAAAACACAGTTCCGGCTGTTATAAGTT 339
consensus_10581#0 TCACACTCAACAGAAGTACATAGGTTGGTGGCTTTGGAACACTTCTAG----TGCGAAGG 1898
consensus_10581#1 TCCAGTTAATGG--TATGTCAATGAT--CAGTAGGGTGCCTCTTTCAGCTCATATGGACA 408
* * * * * * ** * *
consensus_10581#2 CA-AGGACGTCCTTTAGTCTTTTTGGTATCTTCAGAT-TTCAGACCCTCG--ACTCC--A 443
consensus_10581#3 CACATCGAAACTGCTACTATGTTAAAAACACGTAGTTGTTCCCACTGTAGTTGTTCC--A 397
consensus_10581#0 CA-AGGACGTCCTTTAGTCTTTTTGGTATCTTCAGAT-TTCAGACCCTCG--ACTCC--A 1952
consensus_10581#1 CA------AACTGGTTGTCTACTTCAAATCCCAGATTTAATGCACTGCCAGGATTCTTAG 462
** * * * * * * * ** **
consensus_10581#2 TTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAG-GTCAATT----TCCAACTCTCTTAA 498
consensus_10581#3 CTTCTGTTCCCACATTACGTTCTTCCATTCCATTTGTCATTTAGCATCCGGCAGTTTCAA 457
consensus_10581#0 TTGCTTTCTGTTAACCGCGTTTTTTTTAGCTAAG-GTCAATT----TCCAACTCTCTTTA 2007
consensus_10581#1 GTGCTTCAAGCATCTGCCGAGCATACTCCTCAGACACTGGGATTAAGGCAGAAGTTCCAC 522
* ** ** * * * *
consensus_10581#2 AAAAAAA----AAAAAAAAA---AACACTGTCA--------------------------- 524
consensus_10581#3 AACGAGTTTTTACATTTGAG---TGCATATTTGTTCCCAAGTTTGCTTATTGTCAAAAAA 514
consensus_10581#0 ACTTTCCCTT--CGCTTGAT---ATATCATCCGCTAATAGCCTAACAGAGAGAAGCACTG 2062
consensus_10581#1 AGAATACTGTCTCANATGTACCTTCCACAGAAACCGTTGCGCTTGGAACATCTGATGGTG 582
*
consensus_10581#2 ------------------------------------------------------------
consensus_10581#3 ------------------------------------------------------------
consensus_10581#0 CCAATGAGCCACGGTAAACATTTTGGTCCGCATGCTGATAATGTGAGCGGGTAGTTTACC 2122
consensus_10581#1 GTAGTTCTTGGATTGATATCTTCGACAATGCTCGCA------------------------ 618
consensus_10581#2 ---
consensus_10581#3 ---
consensus_10581#0 CCT 2125
consensus_10581#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||