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Oryza sativa
cluster # 10602 cluster # 10602       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10602#0 length = 1686 sequences # 4  
consensus_10602#1 length = 1003 sequences # 2  
consensus_10602#2 length = 395 sequences # 1  

consensusID : consensus_10602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1686
fasta sequence
                              [AGGGGAGGAGGAGAGACGAGAGGAGTGGTTGTGGCCATGGCCATGGCGGCCGCCGTCCACCGCTTCCTTGGCGTATTTCCCGCCCCGTCGACGCCCACGCCTCCGCCTCGACAACTATCGCCTCGCCCCCATCACATTCCTCCTTCCCTCGTCCGATGTTGTTCCTCGTCCCCCGTATGCGCCGCCACAGTTGCAGTTGCACAACCCCAAGAGTTCGTCGTCGTCACCTTCTATAAGTTCGTCTCCATCGACGACCCCCGCGCCGAGGTGTCCAGGCACCTCCACTTCCTCCAGGGCCGCGACATACATGGCCGCATTTACATGAACGAGCAGGGAATCAATGCCCAGTACAGTGGTCCACATAAAGATGCGGTAGCATATGCAGACTGGCTTAGAAAAGACCATCGATTTCGTGATCTACTTGTCCAAACTTCACCATCGTTATGTGGCCATGCTTTTCCTCGCTTGAAACTGCGCATGCGTGCTACACCATTGACTCCATCAGAGTGGAGGGAAAGACTTGAAGCTAGAAAATGCCTTGATGTGTCATCGAGTGAAGCAGCTGGAGATAGCTCTGGAAGGAGGCTTTTGCTCCTCGATGTCAGGAATGATTATGAATGGGATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTGGACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCAGATCCTCTAAATGGTATAGACAAAGAAAATACAGATATATTAATGTACTGCACTGGTGGCATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGTGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCACAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCCGACTGACCGATACCATTGGAAATAAGGGTATGAAAACAGTATGGAAATTTTGCGTGTTCGTAAAAAA]

[+] EMBL AK066129             [AGGGGAGGAGGAGAGACGAGAGGAGTGGTTGTGGCCATGGCCATGGCGGCCGCCGTCCACCGCTTCCTTGGCGTATTTCCCGCCCCGTCGACGCCCACGCCTCCGCCTCGACAACTATCGCCTCGCCCCCATCACATTCCTCCTTCCCTCGTCCGATGTTGTTCCTCGTCCCCCGTATGCGCCGCCACAGTTGCAGTTGCACAACCCCAAGAGTTCGTCGTCGTCACCTTCTATAAGTTCGTCTCCATCGACGACCCCCGCGCCGAGGTGTCCAGGCACCTCCACTTCCTCCAGGGCCGCGACATACATGGCCGCATTTACATGAACGAGCAGGGAATCAATGCCCAGTACAGTGGTCCACATAAAGATGCGGTAGCATATGCAGACTGGCTTAGAAAAGACCATCGATTTCGTGATCTACTTGTCCAAACTTCACCATCGTTATGTGGCCATGCTTTTCCTCGCTTGAAACTGCGCATGCGTGCTACACCATTGACTCCATCAGAGTGGAGGGAAAGACTTGAAGCTAGAAAATGCCTTGATGTGTCATCGAGTGAAGCAGCTGGAGATAGCTCTGGAAGGAGGCTTTTGCTCCTCGATGTCAGGAATGATTATGAATGGGATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTGGACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCAGATCCTCTAAATGGTATAGACAAAGAAAATACAGATATATTAATGTACTGCACTGGTGGCATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGTGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCACAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCCGACTGACCGATACCATTGGAAATAAGGGTATG                                   ]
[+] EMBL CF296779             [     AGGAGGAGAGACGAGAGGAGTGGTTGTGGCCATGGCCATGGCGGCCGCCGTCCACCGCTTCCTTGGCGTATTTCCCGCCCCGTCGACGCCCACGCCTCCGCCTCGACAACTATCGCCTCGCCCCCATCACATTCCTCCTTCCCTCGTTCGATGTTGTTCCTCGTCCCCCGTGGGCGCGGCCACAGTTGCAGTTGCACAACCCCAAGAGTTCGTCGTCGTCACCTTCTATAAGTTCGTCTCCATCGACGACCCCCGCGCCGAGGTGTCCGGGCACCTCCACTTCCTCCAGGGCCGCGACATACATGGCCGCATTTACATGAACGAGCAGGGAATCAATGCCCAGTACAGTGGTCCACATAAAGATGCGGTAGCATATGCAGACTGGCTTANAAAAGACCATCGATTTCGTGATCTACTTGTCCAAACTTCACCATCGTTATGTGGCCATGCTTTTCCTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF296780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAGATACCACAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCCGACTGACCGATACCATTGGAAATAAGGGTATGAAAACAGTATGGAAATTTTGCGTGTTCGTAAAAAA]
[+] EMBL AU166779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCCGACTGACCGATACCATTGGAAATAAGGGTATGAAAACAGTATGGAAAaa                  ]


>consensus_10602#0 AGGGGAGGAGGAGAGACGAGAGGAGTGGTTGTGGCCATGGCCATGGCGGCCGCCGTCCAC CGCTTCCTTGGCGTATTTCCCGCCCCGTCGACGCCCACGCCTCCGCCTCGACAACTATCG CCTCGCCCCCATCACATTCCTCCTTCCCTCGTCCGATGTTGTTCCTCGTCCCCCGTATGC GCCGCCACAGTTGCAGTTGCACAACCCCAAGAGTTCGTCGTCGTCACCTTCTATAAGTTC GTCTCCATCGACGACCCCCGCGCCGAGGTGTCCAGGCACCTCCACTTCCTCCAGGGCCGC GACATACATGGCCGCATTTACATGAACGAGCAGGGAATCAATGCCCAGTACAGTGGTCCA CATAAAGATGCGGTAGCATATGCAGACTGGCTTAGAAAAGACCATCGATTTCGTGATCTA CTTGTCCAAACTTCACCATCGTTATGTGGCCATGCTTTTCCTCGCTTGAAACTGCGCATG CGTGCTACACCATTGACTCCATCAGAGTGGAGGGAAAGACTTGAAGCTAGAAAATGCCTT GATGTGTCATCGAGTGAAGCAGCTGGAGATAGCTCTGGAAGGAGGCTTTTGCTCCTCGAT GTCAGGAATGATTATGAATGGGATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTG GACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCA GATCCTCTAAATGGTATAGACAAAGAAAATACAGATATATTAATGTACTGCACTGGTGGC ATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACA TTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAAT TTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGT GATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGA TGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGAC TGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGT GAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCAC AAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACT AGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTT CCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCT GCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTA ATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTA TTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGT AAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCCG ACTGACCGATACCATTGGAAATAAGGGTATGAAAACAGTATGGAAATTTTGCGTGTTCGT AAAAAA



consensusID : consensus_10602#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1003
fasta sequence
                              [GATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTGGACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCAGATCCTCTAAATGGTATAGACAAAGAAAATACAGATATATTAATGTACTGCACTGGTGGCATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGTGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCACAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGAAAAAAAAAAAAAA]

[+] EMBL AK105046             [GATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTGGACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCAGATCCTCTAAATGGTATAGACAAAGAAAATACAGATATATTAATGTACTGCACTGGTGGCATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGTGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCACAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGAAAAAAAAAAAAAA]
[+] EMBL OSS15795A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGTNTAGTCTCATCTGTCATGNCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTNTCTTAATTT                                                                                                                                                                                    ]


>consensus_10602#1 GATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTGGACTGCTTCAGGAGCACATCC TTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCAGATCCTCTAAATGGTATAGAC AAAGAAAATACAGATATATTAATGTACTGCACTGGTGGCATAAGATGTGATGTGTATTCA ACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAAT TATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGG CTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAG GAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAG GTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGACTGCAACCGGCTTTACCTGTGC TGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGGTGAGGGCTGCACCGCCGCGCCT CGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCACAAGTGGCATCTCTACCGCCAT TTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTACTAGTATAGTACTCCATGCTGCC ATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTTTCCTGCACGCTTAACTGTGCGT GTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCCTGCCTTCTTTCAGCTTCAGTTG GTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTTAATTTTCCTCTTGGCCAGCCTC CTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTTATTGATTATGTATATTTTGATT AGGGACACGTCTACACGGCGACCACTTCATCCCAAGTGTAAACCCTCCTTTTCAGCTTCT AAAAATAGCAAAAGAAGCACTTTGCATGGAAAAAAAAAAAAAA



consensusID : consensus_10602#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 395
fasta sequence
                              [ACTTTGTGGAATGGAAATAGTATGCATCTGGCGTTCTAATAAGACTTTCTTTCGAGTCTGTTTCATTCCCGTACACTATGTTCCCAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTTGAGGAG]

[+] EMBL AU062784             [ACTTTGTGGAATGGAAATAGTATGCATCTGGCGTTCTAATAAGACTTTCTTTCGAGTCTGTTTCATTCCCGTACACTATGTTCCCAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGAACGTACAAGCCTGGAGCAGGTGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAACATCGACTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTTGAGGAG]


>consensus_10602#2 ACTTTGTGGAATGGAAATAGTATGCATCTGGCGTTCTAATAAGACTTTCTTTCGAGTCTG TTTCATTCCCGTACACTATGTTCCCAGGAAGAAGGGCTTCCGGAACCTGTATACATTGAA GGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAATTTGTT CGTGTTTGATGGACGGCTCTCCCTGCCACCGGAACGTACAAGCCTGGAGCAGGTGATGAT GATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAGATGCTAT GCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAACATCGACTGCAACC GGCTTTACCTGTGCTGCGGGCGATGCGTTGAGGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10602#0      AGGGGAGGAGGAGAGACGAGAGGAGTGGTTGTGGCCATGGCCATGGCGGCCGCCGTCCAC 60
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CGCTTCCTTGGCGTATTTCCCGCCCCGTCGACGCCCACGCCTCCGCCTCGACAACTATCG 120
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CCTCGCCCCCATCACATTCCTCCTTCCCTCGTCCGATGTTGTTCCTCGTCCCCCGTATGC 180
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GCCGCCACAGTTGCAGTTGCACAACCCCAAGAGTTCGTCGTCGTCACCTTCTATAAGTTC 240
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GTCTCCATCGACGACCCCCGCGCCGAGGTGTCCAGGCACCTCCACTTCCTCCAGGGCCGC 300
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GACATACATGGCCGCATTTACATGAACGAGCAGGGAATCAATGCCCAGTACAGTGGTCCA 360
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CATAAAGATGCGGTAGCATATGCAGACTGGCTTAGAAAAGACCATCGATTTCGTGATCTA 420
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CTTGTCCAAACTTCACCATCGTTATGTGGCCATGCTTTTCCTCGCTTGAAACTGCGCATG 480
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CGTGCTACACCATTGACTCCATCAGAGTGGAGGGAAAGACTTGAAGCTAGAAAATGCCTT 540
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GATGTGTCATCGAGTGAAGCAGCTGGAGATAGCTCTGGAAGGAGGCTTTTGCTCCTCGAT 600
consensus_10602#1      ------------------------------------------------------------
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GTCAGGAATGATTATGAATGGGATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTG 660
consensus_10602#1      ---------------------GATATTGGACATTTTCAAGGAGCTCAGCGACCTAATGTG 39
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCA 720
consensus_10602#1      GACTGCTTCAGGAGCACATCCTTTGGGCTCTCAGAGTCAGAGCAGGAGATGGATTCTTCA 99
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GATCCTCTAAATGGTATAGACAAAGAAAATA-CAGATATATTAATGTACTGCACTGGTGG 779
consensus_10602#1      GATCCTCTAAATGGTATAGACAAAGAAAATA-CAGATATATTAATGTACTGCACTGGTGG 158
consensus_10602#2      -----ACTTTGTGGAATGGAAATAGTATGCATCTGGCGTTCTAATAAGACTTTCTTTCGA 55
                             **   *** ** ** * ** *   * * *   *  ****        **   * 

consensus_10602#0      CATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATAC 839
consensus_10602#1      CATAAGATGTGATGTGTATTCAACAATTCTTAGGAAGAAGGGCTTCCGGAACCTGTATAC 218
consensus_10602#2      GTCTGTTTCATTCCCGTACACTATG-TTCCCAGGAAGAAGGGCTTCCGGAACCTGTATAC 114
                              *       ***  * *   ***  *****************************

consensus_10602#0      ATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAA 899
consensus_10602#1      ATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAA 278
consensus_10602#2      ATTGAAGGGAGGAGTGTCCAATTATCTGAAGGAGGAGGGGTCTGCAGGATGGGTGGGGAA 174
                       ************************************************************

consensus_10602#0      TTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGG 959
consensus_10602#1      TTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGGCAACGTACAAGCCTGGAGCAGG 338
consensus_10602#2      TTTGTTCGTGTTTGATGGACGGCTCTCCCTGCCACCGG-AACGTACAAGCCTGGAGCAGG 233
                       ************************************** *********************

consensus_10602#0      TGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAG 1019
consensus_10602#1      TGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAG 398
consensus_10602#2      TGATGATGATGATGAGGAGGAGGAGGAGGGGAGAAACAGAAGCAGTTCAGAGCTGGGGAG 293
                       ************************************************************

consensus_10602#0      ATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGA 1079
consensus_10602#1      ATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAAACATCGA 458
consensus_10602#2      ATGCTATGCATGTGGGTCAGAGGTGGTTGAGTTGAGGCACCGGAACTGCGCAA-CATCGA 352
                       ***************************************************** ******

consensus_10602#0      CTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGG 1139
consensus_10602#1      CTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTGGAGGAGCTGAGAGGATGCTGCGG 518
consensus_10602#2      CTGCAACCGGCTTTACCTGTGCTGCGGGCGATGCGTTGAGGAG----------------- 395
                       ************************************ ******                 

consensus_10602#0      TGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCA 1199
consensus_10602#1      TGAGGGCTGCACCGCCGCGCCTCGCCTGCGACCGCTGCTGCCATCACACCAGAGATACCA 578
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      CAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTAC 1259
consensus_10602#1      CAAGTGGCATCTCTACCGCCATTTGGACCTGGGGGCACCATCATCTCCATCCTAGCTTAC 638
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      TAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTT 1319
consensus_10602#1      TAGTATAGTACTCCATGCTGCCATGCATTTGGATGGATTGGATTGGATTTTCCTGTTGTT 698
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      TCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCC 1379
consensus_10602#1      TCCTGCACGCTTAACTGTGCGTGTAGTCTCATCTGTCATGCCCCAAGTCTCAAATCTGCC 758
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      TGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTT 1439
consensus_10602#1      TGCCTTCTTTCAGCTTCAGTTGGTACCAAAGCTGACTCACCTCCACGACGACCTTCTCTT 818
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      AATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTT 1499
consensus_10602#1      AATTTTCCTCTTGGCCAGCCTCCTCTTTACTTTCGGTGGATTCCTATGTATAGTCCCTTT 878
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      ATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTG 1559
consensus_10602#1      ATTGATTATGTATATTTTGATTAGGGACACGTCTACACGGCGACCACTTCATCCCAAGTG 938
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      TAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGATGTACCCC 1619
consensus_10602#1      TAAACCCTCCTTTTCAGCTTCTAAAAATAGCAAAAGAAGCACTTTGCATGGAAAAAAAAA 998
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      GACTGACCGATACCATTGGAAATAAGGGTATGAAAACAGTATGGAAATTTTGCGTGTTCG 1679
consensus_10602#1      AAAAA------------------------------------------------------- 1003
consensus_10602#2      ------------------------------------------------------------
                                                                                   

consensus_10602#0      TAAAAAA 1686
consensus_10602#1      -------
consensus_10602#2      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)