These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10608#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 966 fasta sequence [TGGACTGAAGGAGTAGAAAATTGACGAACTTATCCACAAATTGATCCACCAACGCATCCAGTATCCACAAGCCACCCATCATCAACGCATCTGCCCATCCAGCATCAACACATCCATCCATCAACTCTCATCGGCGATCCATCCATCGAAGACACGCACCGGCGGCGGCGAGCGACTTCGGCCGGAGTCCCGACGTCTGGCAGGAGAGGGCGCGCGCGGTGATCCGATCATTAGCAAGCGCAGGAGAGGAGCTTGATGGCTAGTCAAGGTAAAAGCTAGCAAGATTGTTTCGTTTTCTTTCATCTACAGCACGCACACATCCATGCATAGGGATCCATCTGCACGTATCGTCGTCGCCGGGGAAGTCGCGGTGGCCGATTCATCTACGCGTCACAGAAGCCTCATCGATGCCGGCGTCTGTTCGAGCTGACGCTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCGGGCTAACCATGG-AGGAGGTCATCGGGAAGCCGCCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCC-GGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGGATGACGATGGAGACAAGTATGGCTGCAGTACGAAGGAAGGACGACGGGAGGACGGCGAGCCAGTGCTGTTGGATGGCAACAAGCTAGCTAATGCATGTTGATTAAGTTAATTATTGTGGCAACGTGGCCAACCAATCGGAGGACGACATGTCATCACTGCTACAGTGCCATGCACAAACCAATGCGTGGGCTGAAGAAGTCCTATTGGTTTTTCTTATTCGTCCCAAATGAGATGCCGAGCTTTGATTAAATCCGGTTACCGTCTAAAAAA] [+] EMBL CF333264 [TGGACTGAAGGAGTAGAAAATTGACGAACTTATCCACAAATTGATCCACCAACGCATCCAGTATCCACAAGCCACCCATCATCAACGCATCTGCCCATCCAGCATCAACACATCCATCCATCAACTCTCATCGGCGATCCATCCATCGAAGACACGCACCGGCGGCGGCGAGCGACTTCGGCCGGAGTCCCGACGTCTGGCAGGAGAGGGCGCGCGCGGTGATCCGATCATTAGCAAGCGCAGGAGAGGAGCTTGATGGCTAGTCAAGGTAAAAGCTAGCAAGATTGTTTCGTTTTCTTTCATCTACAGCACGCACACATCCATGCATAGGGATCCATCTGCACGTATCG CGTCGCCGGGG AGTCGCGGTGGCCGATTCATCTACGCGTCACAGAAGCCTCATCGATGCCGGCGTCTGTTCGAGCTGACGCTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGAC ] [+] EMBL CF332490 [ ACTTATCCACAAATTGATCCACCAACGCATCCAGTATCCACAAGCCACCCATCATCAACGCATCTGCCCATCCAGCATCAACACATCCATCCATCAACTCTCATCGGCGATCCATCCATCGAAGACACGCACCGGCGGCGGCGAGCGACTTCGGCCGGAGTCCCGACGTCTGGCAGGAGAGGGCGCGCGCGGTGATCCGATCATTAGCAAGCGCAGGAGAGGAGCTTGATGGCTAGTCAAGGTAAAAGCTAGCAAGATTGTTTCGTTTTCTTTCATCTACAGCACGCACACATCCATGCATAGGGATCCATCTGCACGTATCGTCGTCGCCGGGGAAGTCGCGGTGGCCGATTCATCTACGCGTCACAGAAGCCTCATCGATGCCGGCGTCTGTTCGAGCTGACGCTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCGGGCTAACCATGGAAGGAGGTCATCGGGAAGCCGCCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCCGGGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGG ] [+] EMBL CF334837 [ ACTTATCCACAAATTGATCCACCAACGCATCCAGTATCCACAAGCCACCCATCATCAACGCATCTGCCCATCCAGCATCAACACATCCATCCATCAACTCTCATCGGCGATCCATCCATCGAAGACACGCACCGGCGGCGGCGAGCGACTTCGGCCGGAGTCCCGACGTCTGGCAGGAGAGGGCGCGCGCGGTGATCCGATCATTAGCAAGCGCAGGAGAGGAGCTTGATGGCTAGTCAAGGTAAAAGCTAGCAAGATTGTTTCGTTTTCTTTCATCTACAGCACGCACACATCCATGCATAGGGATCCATCTGCACGTATCGTCGTCGCCGGGGAAGTCGCGGTGGCCGATTCATCTACGCGTCACAGAAGCCTCATCGATGCCGGCGTCTGTTCGAGCTGACGCTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCG ] [-] EMBL CF332489 [ GAAGCCTCATCGATGCCGGCGTCTGTTCGAGCTGACGCTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCGGGCTAACCATGG AGGAGGTCATCGGGAAGCCGCCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCC GGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGGATGACGATGGAGACAAGTATGGCTGCAGTACGAAGGAAGGACGACGGGAGGACGGCGAGCCAGTGCTGTTGGATGGCAACAAGCTAGCTAATGCATGTTGATTAAGTTAATTATTGTGGCAACGTGGCCAACCAATCGGAGGACGACATGTCATCACTGCTACAGTGCCATGCACAAACCAATGCGTGGGCTGAAGAAGTCCTATTGGTTTTacaaaaaa ] [-] EMBL CF333263 [ CTGTGCTACTTGTCCCTGGACTCGACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCGGGCTAACCATGG AGGAGGTCATCGGGAAGCCGCCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCC GGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGGATGACGATGGAGACAAGTATGGCTGCAGTACGAAGGAAGGACGACGGGAGGACGGCGAGCCAGTGCTGTTGGATGGCAACAAGCTAGCTAATGCATGTTGATTAAGTTAATTATTGTGGCAACGTGGCCAACCAATCGGAGGACGACATGTCATCACTGCTACAGTGCCATGCACAAACCAATGCGTGGGCTGAAGAAGTCCTATTGGTTTTTCTTATTCGTCCCAAATGAGATGCCGAGCTTTGATTAAATCCGGTTACCGTCTAAAAAA] [+] EMBL CF305907 [ GACGCTGCTAATTCAAGCTGCTGGTGATGCATCTACCCGAAGCTGCGACCTCGCCGAGATGCCGGACGTCCTTGATTTGCAAGCTTCACCGCACTGGAGCGGGCTAACCATGG AGGAGGTCATCGGGAAGCCGTCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCC GGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGGATGACGATGGAGACAAGTATGGCTGCAGTACGAAGGAAGGACGACGGGAGGACGGCGAGCCAGTGCTGTTGGATGGCAACAAGCTAGCTAATGCATGTTGATTAAGTTAATTATTGTGGCAACGTGGCCAACCAATCGGAGGACGACATGTCATCACTGCTACAGTGCCATGCACAAACCAATGCGTGGGCTGAAGAAGTCCTATTGGTTTTTCTTATTCGTCCCAAATGAGATGCCGAGCTTTGATTAAATCCGGTTACCGTC ] [-] EMBL CF334836 [ TTCACCGCACTGGAGCGGGCTAACCATGG AGGAGGTCATCGGGAAGCCGCCCTGCCGGAGCGCGCCGAGGATCGCCGGAGCTGCCACCGACTGCCAAGATTTCTATCCATTCCCATGCC GGAGGTCAAGTATCACGCATGGCGTCGAAACCAGCGGATGACGATGGAGACAAGTATGGCTGCAGTACGAAGGAAGGACGACGGGAGGACGGCGAGCCAGTGCTGTTGGATGGCAACAAGCTAGCTAATGCATGTTGATTAAGTTAATTATTGTGGCAACGTGGCCAACCAATCGGAGGACGACATGTCATCACTGCTACAGTGCCATGCACAAACCAATGCGTGGGCTGAAGAAGTCCTATTGGTTTTTCTTATTCGTCCCAAATGAGATGCCGAGCTTTGATTAAATCCGGTTACCGTCTAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||