These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10611#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 4096 fasta sequence [GGCACACTGCGAAGAATCAAAGATGGAGAAACATGCAGTAGCATTAGCAGCATTCACTTTTCTAGCCGCCCCCCTGCTGCAGCTGCTGTTGTTTGTCGCGGGGAACGGCAGCAGCTGCACCACCAGCTGCGGCAACGTGAGCTTCGAGTACCCGTTCGGCGTGGAGGCCGGGTGCTACCACCCGGGGTTCGATCTCACCTGCAACCACTCGTACAGCCGCCCAGGCTGTTCCTGGGCCAAGAAAGCAGCACCATGCATCAGGTGCTCGAGATCTCCATCCCCAACGGCACCGTGCGCATCAACAGCAGCCGCATGGTGTTTGCGTCTGCCGTTTTAGAGAACAGCACCACCATGCGGTGGGAGGTGGGTAAATCCTACTTCCTGTCGGATTTAAACATTATAGCGTTGGTAGGATGCAACGCCCAGGTCTCCCTCCGCGATTGGGGCGATACACTCGTCAACTCCTGCATCACGTCGTGCCCTCTATCACTCGACTCCGGTAATGGCTCCTGCTCAGGAATTGGCTGCTGTGAGGCAAGCATTGCTATGCACATACCGGTCTACAGCATTAGCGCCAACCAAGTGGTGGACCCGGGTGCAGGACCTGACCCTAATGAACCAAATTTTTTCGTGTACATAGTAGATCAGGCGTCGTTTTATTTCGACACCAACATGGTTACTAAGGGCATCAGCAATACTCCTGAAGCGCTCCCAGCCATGTTAAACTGGCTTATACTCAGCAATTCATCAGCGTGCTCGGCATCGACCAATGCTTCTGCACCTTCGTCTGCCCCCGAATGTTGCAGCGCCAACAGCTTCTGCAAAGGTTACAACGGTACTACTGCTGACTACGATGGGTATCGGTGCTACTGCTCCGATGGCTATGAAGGAAATCCTTATGTTGATGGTGGATGCCGCGGTAAGTATGTAGTACTACCTCCGTTTCAGATTATAAGACTTTTTAGCATTGTCTATATTCAATAGATGTTAATAAATCTAGACACACATATATGTCTACATTCATTAACATATATATGAATGTGGGTAATGTTAGAAAGTCTTATAATATGAAACGAAGGAAGTACATAATATGCTCTAGACTCTTCTTTCAATATTTTTTTTATTTGTAATTGTATTTCAATATTAACTCTAAACTCATCATTTAATATTTCTTATTTTATAATTTTGAATTTTATTTATTCTAAATTGTATTTCTATATCAACTTTATACTATTTTTCCAATATTTCTTATTTTACTTATATCTAGATTGTATTTATATATCGACTCCATACTATTTTTCCAATATTTCTTATTTTACTTATATCTAAATTGTATTTCTATATGCACTTTAAAGTCTAAAATACAATTTTAATTTTATTATATTTTATTCTGAATTTCAGTTAGTTCTAAATTTCTATATGGACTTTATACTATTCTTCAATATTCCTTTTTTAAAAATTTTGATTTTTTTTTTGTTATTTCTAAATTGTATTTCTATATGGACTCTACCCCTTTGCCTTTAATTTTCTTTTTTTTAATTCCAAATTTTAGTTGGTTCAAAATTGTATACAATATGGACTCTAGACACCTCTTTCAATATACTCCCTCTATTTTAATATATGACGTAGTTGACTTTTTTTATGATACGTTAACAATTCTTTTTTTAGAAAAAGTTGTGTAATTATCATTTATTTTATTGTGACTTAATTTTTCATCAAATATTCTTTAAGCATGACTTGAATATATATTTTTATATTTACACAAAATTTTGAATAAGACAAATGGTCAAATATTTGTTAAAATATCAACAGTGTAATATATTAAAAAAGGAGGTAGTACCTTATTTCTTAATTCCAAATTTCAGCTATTTTTAAATTGTATTTTCTACATGGACTCTATTTTTTTTCCGATTAATATGAGAAATTCTAAACCATGAGAACGAACGTGGAGGTTTTTTTCCCTGTTACTTTAATAAGTTAATAGATTGACCGGGGATTTATTCCACACCTCAGCAAGTGTGGAATTAATCATTTCCAACAAGTCTCCTTCTATTTTCGTGAGATGAGATTAACTGAACAAACTAGGCTTTAACTATTTATAAGTGAAAACCGACTAACCTTTGCTATCGGTTTTGTCCTTGATTGGTGGATGCTATCAACTTACATTAAGTTTTATATTTATTACTTTCTTACAGAGTTATTACAGTAGAAAGACTTAGTCATATTTTTACTGTAAAAAGTCTAATAACGTATACCCTCTGTCTTACCGGCCGACATAGTGGTAATAAGTGCGTTCTTATTTTAGTCTACCCTTCTCTTATTTAATCTAACTTAATTTGTTCTGTTCGTCTAGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCGACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACGCTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCATGCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAAGCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTCTAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTCGCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATGGGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTACCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTGGAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAATCAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCCAAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCATTATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGATCTATATCATTACCTTGGGATGATAGATTAAGGATAGCTCTTGAAGTTGCTAGAGCTCTTTCATATCTGCATTCATCGGCATCAATGCCAATATTTTATAGAGATATTAAATCTTCCAATATACTTCTTGATGACAACCTAACAGCAAAGGTATCCGACTTTAGAGCTTCAAGATATATCTCAATCAATGAAACAGGAATAACTACTGCAGTTCAAGGAACGATTGGCTACTTGGATCCTATGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTCTTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTCAAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTACTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCATAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATGAAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTACAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAATCATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATCCTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAGAAAAATTGTGTCGTATCAGAACTTTGAAGTACTTGTGGTTTAGTTCATGTTGATTAAGCATCTGATTCGATCAGTTTGCTCTAATGGACTGAAATTGCAGAGTGCCGTTTGTGTTTTCATTAAAAAAAAAAAAAAGGA] [+] EMBL AK067363 [GGCACACTGCGAAGAATCAAAGATGGAGAAACATGCAGTAGCATTAGCAGCATTCACTTTTCTAGCCGCCCCCCTGCTGCAGCTGCTGTTGTTTGTCGCGGGGAACGGCAGCAGCTGCACCACCAGCTGCGGCAACGTGAGCTTCGAGTACCCGTTCGGCGTGGAGGCCGGGTGCTACCACCCGGGGTTCGATCTCACCTGCAACCACTCGTACAGCCGCCCAGGCTGTTCCTGGGCCAAGAAAGCAGCACCATGCATCAGGTGCTCGAGATCTCCATCCCCAACGGCACCGTGCGCATCAACAGCAGCCGCATGGTGTTTGCGTCTGCCGTTTTAGAGAACAGCACCACCATGCGGTGGGAGGTGGGTAAATCCTACTTCCTGTCGGATTTAAACATTATAGCGTTGGTAGGATGCAACGCCCAGGTCTCCCTCCGCGATTGGGGCGATACACTCGTCAACTCCTGCATCACGTCGTGCCCTCTATCACTCGACTCCGGTAATGGCTCCTGCTCAGGAATTGGCTGCTGTGAGGCAAGCATTGCTATGCACATACCGGTCTACAGCATTAGCGCCAACCAAGTGGTGGACCCGGGTGCAGGACCTGACCCTAATGAACCAAATTTTTTCGTGTACATAGTAGATCAGGCGTCGTTTTATTTCGACACCAACATGGTTACTAAGGGCATCAGCAATACTCCTGAAGCGCTCCCAGCCATGTTAAACTGGCTTATACTCAGCAATTCATCAGCGTGCTCGGCATCGACCAATGCTTCTGCACCTTCGTCTGCCCCCGAATGTTGCAGCGCCAACAGCTTCTGCAAAGGTTACAACGGTACTACTGCTGACTACGATGGGTATCGGTGCTACTGCTCCGATGGCTATGAAGGAAATCCTTATGTTGATGGTGGATGCCGCGGTAAGTATGTAGTACTACCTCCGTTTCAGATTATAAGACTTTTTAGCATTGTCTATATTCAATAGATGTTAATAAATCTAGACACACATATATGTCTACATTCATTAACATATATATGAATGTGGGTAATGTTAGAAAGTCTTATAATATGAAACGAAGGAAGTACATAATATGCTCTAGACTCTTCTTTCAATATTTTTTTTATTTGTAATTGTATTTCAATATTAACTCTAAACTCATCATTTAATATTTCTTATTTTATAATTTTGAATTTTATTTATTCTAAATTGTATTTCTATATCAACTTTATACTATTTTTCCAATATTTCTTATTTTACTTATATCTAGATTGTATTTATATATCGACTCCATACTATTTTTCCAATATTTCTTATTTTACTTATATCTAAATTGTATTTCTATATGCACTTTAAAGTCTAAAATACAATTTTAATTTTATTATATTTTATTCTGAATTTCAGTTAGTTCTAAATTTCTATATGGACTTTATACTATTCTTCAATATTCCTTTTTTAAAAATTTTGATTTTTTTTTTGTTATTTCTAAATTGTATTTCTATATGGACTCTACCCCTTTGCCTTTAATTTTCTTTTTTTTAATTCCAAATTTTAGTTGGTTCAAAATTGTATACAATATGGACTCTAGACACCTCTTTCAATATACTCCCTCTATTTTAATATATGACGTAGTTGACTTTTTTTATGATACGTTAACAATTCTTTTTTTAGAAAAAGTTGTGTAATTATCATTTATTTTATTGTGACTTAATTTTTCATCAAATATTCTTTAAGCATGACTTGAATATATATTTTTATATTTACACAAAATTTTGAATAAGACAAATGGTCAAATATTTGTTAAAATATCAACAGTGTAATATATTAAAAAAGGAGGTAGTACCTTATTTCTTAATTCCAAATTTCAGCTATTTTTAAATTGTATTTTCTACATGGACTCTATTTTTTTTCCGATTAATATGAGAAATTCTAAACCATGAGAACGAACGTGGAGGTTTTTTTCCCTGTTACTTTAATAAGTTAATAGATTGACCGGGGATTTATTCCACACCTCAGCAAGTGTGGAATTAATCATTTCCAACAAGTCTCCTTCTATTTTCGTGAGATGAGATTAACTGAACAAACTAGGCTTTAACTATTTATAAGTGAAAACCGACTAACCTTTGCTATCGGTTTTGTCCTTGATTGGTGGATGCTATCAACTTACATTAAGTTTTATATTTATTACTTTCTTACAGAGTTATTACAGTAGAAAGACTTAGTCATATTTTTACTGTAAAAAGTCTAATAACGTATACCCTCTGTCTTACCGGCCGACATAGTGGTAATAAGTGCGTTCTTATTTTAGTCTACCCTTCTCTTATTTAATCTAACTTAATTTGTTCTGTTCGTCTAGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCGACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACGCTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCATGCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAAGCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTCTAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTCGCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATGGGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTACCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTGGAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAATCAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCCAAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCATTATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGATCTATATCATTACCTTGGGATGATAGATTAAGGATAGCTCTTGAAGTTGCTAGAGCTCTTTCATATCTGCATTCATCGGCATCAATGCCAATATTTTATAGAGATATTAAATCTTCCAATATACTTCTTGATGACAACCTAACAGCAAAGGTATCCGACTTTAGAGCTTCAAGATATATCTCAATCAATGAAACAGGAATAACTACTGCAGTTCAAGGAACGATTGGCTACTTGGATCCTATGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTCTTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTCAAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTACTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCATAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATGAAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTACAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAATCATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATCCTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAGAAAAATT ] [+] EMBL CB628071 [ AGAAACATGCAGTAGCATTAGCAGCATTCACTTTTCTAGCCGCCCCCCTGCTGCAGCTGCTGTTGTTTGTCGCGGGGAACGGCAGCAGCTGCACCACCAGCTGCGGCAACGTGAGCTTCGAGTACCCGTTCGGCGTGGAGGCCGGGTGCTACCACCCGGGGTTCGATCTCACCTGCAACCACTCGTACAGCCGCCCAGGCTGTTCCTGGGCCAAGAAAGCAGCACCATGCATCAGGTGCTCGAGATCTCCATCCCCAACGGCACCGTGCGCATCAACAGCAGCCGCATGGTGTTTGCGTCTGCCGTTTTAGAGAACAGCACCACCATGCGGTGGGAGGTGGGTAAATCCTACTTCCTGTCGGATTTAAACATTATAGCGTTGGTAGGATGCAACGCCCAGGTCTCCCTCCGCGATTGGGGCGATACACTCGTCAACTCCTGCATCACGTCGTGCCCTCTATCACTCGACTCCGGTAATGGCTCCTGCTCAGGAATTGGCTGCTGTGAGGCAAGCATTGCTATGCACATACCGGTCTACAGCATTAGCGCCAACCAAGTGGTGGACCCGGGTGCAGGACCTGACCCTAATGAACCAAATTTTTTCGTGTACATAGTAGATCAGGCGTCGTTTTATTTCGACACCAACATGGTTACTAAGGGCATCAGCAATACTCCTGAAGCGCTCCCAGCCATGTTAAACTGGCTTATACTCAGCAATTCATCAGCGTGCTCGGCATCGACCAATGCTTCTGCACCTTCGTCTGCCCCCGAATGTTGCAGCGCCAACAGCTTCTGCAAAGGGTACAACGGTACTACTGCTGACTAC ] [+] EMBL CB635639 [ AACATGCAGTAGCATTAGCAGCATTCACTTTTCTAGCCGCCCCCCTGCTGCAGCTGCTGTTGTTTGTCGCGGGGAACGGCAGCAGCTGCACCACCAGCTGCGGCAACGTGAGCTTCGAGTACCCGTTCGGCGTGGAGGCCGGGTGCTACCACCCGGGGTTCGATCTCACCTGCAACCACTCGTACAGCCGCCCAGGCTGTTCCTGGGCCAAGAAAGCAGCACCATGCATCAGGTGCTCGAGATCTCCATCCCCAACGGCACCGTGCGCATCAACAGCAGCCGCATGGTGTTTGCGTCTGCCGTTTTAGAGAACAGCACCACCATGCGGTGGGAGGTGGGTAAATCCTACTTCCTGTCGGATTTAAACATTATAGCGTTGGTAGGATGCAACGCCCAGGTCTCCCTCCGCGATTGGGGCGATACACTCGTCAACTCCTGCATCACGTCGTGCCCTCTATCACTCGACTCCGGTAATGGCTCCTGCTCAGGAATTGGCTGCTGTGAGGCAAGCATTGCTATGCACATACCGGTCTACAGCATTAGCGCCAACCAAGTGGTGGACCCGGGTGCAGGACCTGACCCTAATGAACCAAATTTTTTCGTGTACATAGTAGATCAGGCGTCGTTTTATTTCGACACCAACATGGTTACTAAGGGCATCAGCAATACTCCTGAAGCGCTCCCAGCCATGTTAAACTGGCTTATACTCAGCAATTCATCAGCGTGCTCGGCATCGACCAATGCTTCTGCACCTTCGTCTGCCCCCGAATGTTGCAGCGCCAACAGCTTCTGCAAAGGTTACAACGGTA ] [-] EMBL CB628072 [ GAGCTCTTTCATATCTGCATTCATCGGCATCAATGCCAATATTTTATAGAGATATTAAATCTTCCAATATACTTCTTGATGACAACCTAACAGCAAAGGTATCCGACTTTGGAGCTTCAAGATATATCTCAATCAATGAAACAGGAATAACTACTGCAGTTCAAGGAACGATTGGCTACTTGGATCCTATGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTCTTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTCAAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTACTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCATAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATGAAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTACAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAATCATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATCCTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAGAAAAATTGTGTCGTATCA ] [-] EMBL CB677467 [ GCATCAATGCCAATATTTTATAGAGATATTAAATCTTCCAATATACTTCTTGATGACAACCTAACAGCAAAGGTATCCGACTTTAGAGCTTCAAGATATATCTCAATCAATGAAACAGGAATAACTACTGCAGTTCAAGGAACGATTGGCTACTTGGATCCTATGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTCTTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTCAAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTACTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCATAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATGAAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTACAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAATCATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATCCTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAGAAAAATTG ] [-] EMBL CB635640 [ GAACGATTGGCTACTTGGATCCTATGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTCTTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTCTTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTCAAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTACTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCATAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATGAAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTACAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAATCATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATCCTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAGAAAAATTGTGTCGTATCAGAACTTTGAAGTACTTGTGGTTTAGTTCATGTTGATTAAGCATCTGATTCGATCAGTTTGCTCTAATGGACTGAAATTGCAGAGTGCCGTTTGTGTTTTCATTAAAAAAAAAAAAAAGGA] consensusID : consensus_10611#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 814 fasta sequence [CCGACGGCTATGAAGGAAATCCTTATGTTGATGGTGGATGCCGCGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCGACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACGCTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCATGCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAAGCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTCTAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTCGCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATGGGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTACCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTGGAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAATCAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCCAAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCATTATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGATCTAT] [+] EMBL CB677466 [CCGACGGCTATGAAGGAAATCCTTATGTTGATGGTGGATGCCGCGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCGACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACGCTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCATGCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAAGCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTCTAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTCGCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATGGGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTACCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTGGAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAATCAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCCAAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCATTATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGATCTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10611#0 GGCACACTGCGAAGAATCAAAGATGGAGAAACATGCAGTAGCATTAGCAGCATTCACTTT 60 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TCTAGCCGCCCCCCTGCTGCAGCTGCTGTTGTTTGTCGCGGGGAACGGCAGCAGCTGCAC 120 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CACCAGCTGCGGCAACGTGAGCTTCGAGTACCCGTTCGGCGTGGAGGCCGGGTGCTACCA 180 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CCCGGGGTTCGATCTCACCTGCAACCACTCGTACAGCCGCCCAGGCTGTTCCTGGGCCAA 240 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GAAAGCAGCACCATGCATCAGGTGCTCGAGATCTCCATCCCCAACGGCACCGTGCGCATC 300 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AACAGCAGCCGCATGGTGTTTGCGTCTGCCGTTTTAGAGAACAGCACCACCATGCGGTGG 360 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GAGGTGGGTAAATCCTACTTCCTGTCGGATTTAAACATTATAGCGTTGGTAGGATGCAAC 420 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GCCCAGGTCTCCCTCCGCGATTGGGGCGATACACTCGTCAACTCCTGCATCACGTCGTGC 480 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CCTCTATCACTCGACTCCGGTAATGGCTCCTGCTCAGGAATTGGCTGCTGTGAGGCAAGC 540 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ATTGCTATGCACATACCGGTCTACAGCATTAGCGCCAACCAAGTGGTGGACCCGGGTGCA 600 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GGACCTGACCCTAATGAACCAAATTTTTTCGTGTACATAGTAGATCAGGCGTCGTTTTAT 660 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTCGACACCAACATGGTTACTAAGGGCATCAGCAATACTCCTGAAGCGCTCCCAGCCATG 720 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTAAACTGGCTTATACTCAGCAATTCATCAGCGTGCTCGGCATCGACCAATGCTTCTGCA 780 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CCTTCGTCTGCCCCCGAATGTTGCAGCGCCAACAGCTTCTGCAAAGGTTACAACGGTACT 840 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ACTGCTGACTACGATGGGTATCGGTGCTACTGCTCCGATGGCTATGAAGGAAATCCTTAT 900 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GTTGATGGTGGATGCCGCGGTAAGTATGTAGTACTACCTCCGTTTCAGATTATAAGACTT 960 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTTAGCATTGTCTATATTCAATAGATGTTAATAAATCTAGACACACATATATGTCTACAT 1020 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TCATTAACATATATATGAATGTGGGTAATGTTAGAAAGTCTTATAATATGAAACGAAGGA 1080 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AGTACATAATATGCTCTAGACTCTTCTTTCAATATTTTTTTTATTTGTAATTGTATTTCA 1140 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ATATTAACTCTAAACTCATCATTTAATATTTCTTATTTTATAATTTTGAATTTTATTTAT 1200 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TCTAAATTGTATTTCTATATCAACTTTATACTATTTTTCCAATATTTCTTATTTTACTTA 1260 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TATCTAGATTGTATTTATATATCGACTCCATACTATTTTTCCAATATTTCTTATTTTACT 1320 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TATATCTAAATTGTATTTCTATATGCACTTTAAAGTCTAAAATACAATTTTAATTTTATT 1380 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ATATTTTATTCTGAATTTCAGTTAGTTCTAAATTTCTATATGGACTTTATACTATTCTTC 1440 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AATATTCCTTTTTTAAAAATTTTGATTTTTTTTTTGTTATTTCTAAATTGTATTTCTATA 1500 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TGGACTCTACCCCTTTGCCTTTAATTTTCTTTTTTTTAATTCCAAATTTTAGTTGGTTCA 1560 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAATTGTATACAATATGGACTCTAGACACCTCTTTCAATATACTCCCTCTATTTTAATAT 1620 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ATGACGTAGTTGACTTTTTTTATGATACGTTAACAATTCTTTTTTTAGAAAAAGTTGTGT 1680 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AATTATCATTTATTTTATTGTGACTTAATTTTTCATCAAATATTCTTTAAGCATGACTTG 1740 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AATATATATTTTTATATTTACACAAAATTTTGAATAAGACAAATGGTCAAATATTTGTTA 1800 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAATATCAACAGTGTAATATATTAAAAAAGGAGGTAGTACCTTATTTCTTAATTCCAAAT 1860 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTCAGCTATTTTTAAATTGTATTTTCTACATGGACTCTATTTTTTTTCCGATTAATATGA 1920 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GAAATTCTAAACCATGAGAACGAACGTGGAGGTTTTTTTCCCTGTTACTTTAATAAGTTA 1980 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 ATAGATTGACCGGGGATTTATTCCACACCTCAGCAAGTGTGGAATTAATCATTTCCAACA 2040 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AGTCTCCTTCTATTTTCGTGAGATGAGATTAACTGAACAAACTAGGCTTTAACTATTTAT 2100 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAGTGAAAACCGACTAACCTTTGCTATCGGTTTTGTCCTTGATTGGTGGATGCTATCAAC 2160 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTACATTAAGTTTTATATTTATTACTTTCTTACAGAGTTATTACAGTAGAAAGACTTAGT 2220 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CATATTTTTACTGTAAAAAGTCTAATAACGTATACCCTCTGTCTTACCGGCCGACATAGT 2280 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 GGTAATAAGTGCGTTCTTATTTTAGTCTACCCTTCTCTTATTTAATCTAACTTAATTT-- 2338 consensus_10611#1 ------------------------------CCGACGGCTATGAAGGAAATCCTTATGTTG 30 ** * *** * * * * ** * consensus_10611#0 GTTCTGTTCGTCTAGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCG 2398 consensus_10611#1 ATGGTGGATGCCGCGATATCGATGAATGCAAATCTCCACACATCTACCCCTGTTACGGCG 90 * ** * * ********************************************** consensus_10611#0 ACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACG 2458 consensus_10611#1 ACTGCAAAAATACACGAGGAGGGTATGATTGCCAGTGCCATCATGGATACAAGGGAAACG 150 ************************************************************ consensus_10611#0 CTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCAT 2518 consensus_10611#1 CTTCGATACTGAATGGATGTCAAGATATTAACGAGTGTGCGGAACCAGAAAAATACTCAT 210 ************************************************************ consensus_10611#0 GCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAA 2578 consensus_10611#1 GCTATGGTGGACTCTGCATAAATACGCCAGGAGCTTTTGTTTGCCGCTGCCACGACGGAA 270 ************************************************************ consensus_10611#0 GCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTC 2638 consensus_10611#1 GCTACGGTGATCCCTTCACAAAAGGAGGGTGCCGTTCATCTAAAGGTTTGACCATTGGTC 330 ************************************************************ consensus_10611#0 TAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTC 2698 consensus_10611#1 TAATAGTCAGCGGTGGTTCAGTCCTTCTACTTCTAGGGCTTGCTGCTCCCTTCATAGTTC 390 ************************************************************ consensus_10611#0 GCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATG 2758 consensus_10611#1 GCAAGGTCAAGCTACAAAGGGTAAAGAAAATGAGGGATAAATTCTTTATGCAAAACCATG 450 ************************************************************ consensus_10611#0 GGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTA 2818 consensus_10611#1 GGTTATTATTACAACAGTTAATATCACGAAACACAGACTTCGCCGAAAGAATGATCATTA 510 ************************************************************ consensus_10611#0 CCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTG 2878 consensus_10611#1 CCTTACAAGAGCTTGAGATTGCTACAAACAATTTTGACAAATCTCGTGAGGTTGGTACTG 570 ************************************************************ consensus_10611#0 GAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAAT 2938 consensus_10611#1 GAGGACATGGGGTCGTGTATAAAGGGATTATAGATCTACATGTTGTGGCCATCAAGAAAT 630 ************************************************************ consensus_10611#0 CAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCC 2998 consensus_10611#1 CAAAGATTGTTGTGCAAAGAGAAATAGATGAATTCATAAATGAAGTCGCAATTCTTTCCC 690 ************************************************************ consensus_10611#0 AAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCAT 3058 consensus_10611#1 AAGTGAACCATAGAAATGTGGTAAAGCTCCTCGGATGTTGCCTTGAGACAGAAGTTCCAT 750 ************************************************************ consensus_10611#0 TATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGAT 3118 consensus_10611#1 TATTAGTTTATGAGTTCATTTCAAATGGAACCCTTTACCATCATCTTCATGTTGAAGGAT 810 ************************************************************ consensus_10611#0 CTATATCATTACCTTGGGATGATAGATTAAGGATAGCTCTTGAAGTTGCTAGAGCTCTTT 3178 consensus_10611#1 CTAT-------------------------------------------------------- 814 **** consensus_10611#0 CATATCTGCATTCATCGGCATCAATGCCAATATTTTATAGAGATATTAAATCTTCCAATA 3238 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TACTTCTTGATGACAACCTAACAGCAAAGGTATCCGACTTTAGAGCTTCAAGATATATCT 3298 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CAATCAATGAAACAGGAATAACTACTGCAGTTCAAGGAACGATTGGCTACTTGGATCCTA 3358 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TGTACTATTATACGGGACGACTTACGAGCAAGAGTGATGTTTTTAGTTTTGGTGTTCTTC 3418 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTATGGAGCTACTTACTCGAAAGAAACCCATCGGTGGTACATTTGATAATGGCGATGGTC 3478 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TTGTTTCACATGTTATCTCACTTCTCTCAAAAGGTAATCTTTATAATATAATAGATTCTC 3538 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAGTTAAAGAAGAGGAAGATGGAGAAGTCCTAGAAGTGGCAACACTAGCCACAACATGTA 3598 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CTAAGTTTAAAGGAGAAGAGCGGCCTACGATGAGAGAAGTAGAGATGGCACTGGAAAGCA 3658 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TAGTTTCAAAGAAAAGCTCCTTCTGTAACAAGAACAGTCAATCAAGTAGTAGATCCGATG 3718 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAAATCGAATTTTAGCTCTTTACATGTCGATCGAAGGAGTTACCAAGGACAAAACAATTA 3778 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CAATTACAGAAAGCAGCACGGAAGGGGAAATACCATTGTCGTCAAGGTTTTCTCGATAAT 3838 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CATTCTCTGTCCTGAACGAGAACGCCTTGCAAGAAAGCCGGAAACTTAGTTACATCGATC 3898 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 CTGTTCTGTTCTAAATGATTGCTAAAGTAATTTTGCTGTAAAACAATAATAATGCAACAG 3958 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 AAAAATTGTGTCGTATCAGAACTTTGAAGTACTTGTGGTTTAGTTCATGTTGATTAAGCA 4018 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TCTGATTCGATCAGTTTGCTCTAATGGACTGAAATTGCAGAGTGCCGTTTGTGTTTTCAT 4078 consensus_10611#1 ------------------------------------------------------------ consensus_10611#0 TAAAAAAAAAAAAAAGGA 4096 consensus_10611#1 ------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||