These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 674 fasta sequence [AGCTACCCTAGCCTTACTAAAGGGAATAGCTTGCGGCGCGTCTACAGCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG---CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA-CGCGTCGGCGGA-GCATTGCAGGGAGCAGGAGACGACGAGCCGGA-ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT-----AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA-GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC---AAAAAAAAAATGCAGGA-GGACAAGA-CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT-CTGTTAAAACT-AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACC--C--GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG-TTTTTTT-TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTCCCTAGGTTTTTTAATTCTAAG] [+] EMBL BU673466 [AGCTACCCTAGCCTTACTAAAGGGAATAGCTTGCGGCGCGTCTACAGCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCGCGCGCCGACGCGCGGCGGCGCCCCCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGACCGCGTCGGCGGACGCATTGCCGGGAGCAGGAGACGACGCGCCGGACACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCTAGGCAAGGCAAGGCAAGCCTTGCAAGTTTGTAGCAAGACAGACGGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCCCCAAAAAAAAAAATGCAGGACGGACAAGACCAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTGGTTTTAGGTTTTATGTCACAGTGCCACACGCACC C GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTTTTTTATTAATATTACAAAATTCAGTTTGACTTAAGTNGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTC ] [+] EMBL BU673239 [ GCCAGCCCCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCGCGCGCCGACGCGCGGCGGCGCCCCCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCTAGGCAAGGCAAGGCAAGCCTTGCAAGTTTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCCCCAAAAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTTTGTTTTATGTCACAGTGCCACACGCACC C GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAGTTTTTTTT TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACACGTC ] [-] EMBL CB664907 [ CCACCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTTTTCGTAAGTTTGCTCAATGAAATCGCCCCC AAAAAAAAAATGCAGGA GGCCAAGC CCGAGAGTAGCTCAAGAGTCTTCAGTGTAGCTCAAGTTCCTGTTAAAGCTCAATGTATCTGATTTTTAATCTGCTGTTTTTGGTCTTGTGTTTTATTTCACAGTTCCACGAGCTCC CGGGGTGCTGGTCCCAAATTCGGTGAGCTCAATGGCAAATTTGCATTAAATCGG G TTCGTTT TTTTTTTTCCAAAACTCAGTTTGcgtt ] [+] EMBL CB633610 [ CCGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTCTTCGCCCGCGCCGACGCGCGGCGGCG CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC AAAAAAAAATGCAGGA GGACAAGA CAGACAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACCCGC GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTT ] [-] EMBL CB633611 [ CGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA CGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC AAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT CTGTTAAAACT AATGTATCTGATTTTTAATCTGCTGTTTTTTGTTTTGTGTTTTATTTCACAGTGCCACACGCACCCGC GGTGCTCGTCCCAAATTCGGTGAGCTCAATCGCAAATTCGCATTAAATTGGATTAG TTTTTTT TTTTTTTTACAAAATTCAGTTTGACTTAAGTTGGTCCCAAGCAAATGTGTAAATTGTGATTTGTGGGAGATTCAGTTTGACAAAGGCCTAGGTTTTTTAATTCTAAG] [-] EMBL CB673581 [ CGCCGACGCGGACGACGAGGACGCCACCACGGAGCGCGCCGATGACGCCGCGGCGGGCGTCCGGTTCATAGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGAGGACGAGCCGGA ACGGCGGCGCCGCCGCCGGGGACGCCTCCGATTAAGAT AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAAGGAAATCGCCCCC AAAAAAAAAATGCAGGA GGACAAGA CAGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCAAGAT AGGGTAAAATT AATGTATCTGATTTTTAATCaaaa ] [-] EMBL CB660102 [ CGCCGACGCCGACGACGACGACGCCACCACGGAGCGCGCCGACGACGCCGCGGCGGGCGTCCGGTTCATCGACTTTTTCGCCCGCGCCGACGCGCGGCGGCG CCGCGCGGCGTCGCCGGTGTCGTCGAGCTGCGTGACGGA TGCGTCGGCGGA GCATTGCAGGGAGCAGGAGACGACGAGCCGGA ACGGCGGCGCCGCCGCCGGCGACGCCTCCGACTAAGCT AGGCAAGGCAAGCCTTGCAAGATTGTAGCAAGAAAGA GGCAGGGTTAAGCTTTGTTTGTAAGTTTGCTTAACGAAATCGCCCCC AAAAAAAAAATGCAGGA GGACAAGA GGGAGAGTAGCTCAAGAGTGTTCAGTGTAGCTCATTAA C GGTAAAACT AATGTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||