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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10649#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2333 fasta sequence
[CCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCATTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGACGGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGGGAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGCCGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACAAAGAGAAGGTGCAGAAGGTAATCTACGAAATGAGCAAGGGTTCAAAATATTTTGAAAATGAACAGAGGAAAGAGGCAATTACCAAACAAAAAATCGACCATCTGCGTGCACAATGTGCAAAGCTGACTGACAATGACATATCACATTTTCAGAAGGTCGCCGAACATAAAATTTTGGAGCTGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATGCTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCATGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGCCTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGAGATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAGGTACGATCCCAACTTTGTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACGAAAGTCTGCTTCGATAGAGGCATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTAACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTCTGATATCAACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTATCAACACTACCTATAAGAAAGGTACTCCTGTTTTTAGTAGTGAAGAATGGACCTTGTTTCTAGAAGTATTTTGTTGTTCTAATAGTTCTTGTTTCCTTCATATATATATATTCATTCGTACATTGTTAAACCACTAAATATTCTAACCAGTGCGCATATTCTTTCCACAGTAGTCCTTCAAAACAATAGCATTTGGGCATTCCCCATTTATGGACACCACTTTTTACTTCTTTAATTGAGATGGAGTTTTCTTTACTACTAAGTGCTTTGCCTCTTTGGACATTCATGAAAAAGGTGAAGGCTGATTTTTTATTTGAAGATCTTTGTATGCAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCAGCTGGTTCGTATGTTAGTAACACTTGTTAGTTCCATTGCAAGTTTTCAGAAGCTATATTATACCTATCCCAAGCAGACACCACAATTCAATTTCTTGAACCAAACACCATTCTGTGCCTGCTTAATTTGATCCTTTGGACGTTCTCCAGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTGAAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAACAGATGATTGTTCTATGCTTTTCGAGAAATTAGGTAAACATCCTTACTAAGTTATTGTTCTAGCTATGAGGCCTGTTGATTGTAGATTTCAAACCTTGAAGCTACTTTGAAATTTCATATGCTATTGTTACTAAGTAACTAGGTTGTCTTACAGAAGAGACTTGCAATCTTATTCGAACAGAAGCATTTTTCCTATTTTAATGGTATATTTGTCAATAGGCCAAGAGCATATTATTTTGCGCAATAATTTGAGACACGTCATGATTATTCGAGAGCTTGAGTAGAAAGTAGTTGTTTGAAATTAGTCAATTATGCTGCAACAAGCTGTTTACATTTGATGAGGAAATATAATTTCTGGTGAGTGGTAGTTTTGGTTGGGATAGCAAACTATGCAAGGTGGAACTTGTTAGGCAGCTTTGACTGCATACCTGAGATCTGGTGTTCAATCTTGATAGTGCTGGGGACCACTGGTCCGGGATTGAAGGATCACAACGCTCTATGAATATGAGCTATTTCATGTGTCAATTATTCTACATTTCTACATATGAGATACTAGAAGCCAAGTTGACTGGAAACAGGCAACTAACCAGGGTTTGGTATTTCAGAATTCTGAAATCTTAAATTTTG]
[+] EMBL AK102930 [CCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCATTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGACGGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGGGAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGCCGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACAAAGAGAAGGTGCAGAAGGTAATCTACGAAATGAGCAAGGGTTCAAAATATTTTGAAAATGAACAGAGGAAAGAGGCAATTACCAAACAAAAAATCGACCATCTGCGTGCACAATGTGCAAAGCTGACTGACAATGACATATCACATTTTCAGAAGGTCGCCGAACATAAAATTTTGGAGCTGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATGCTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCATGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGCCTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGAGATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAGGTACGATCCCAACTTTGTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACGAAAGTCTGCTTCGATAGAGGCATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTAACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTCTGATATCAACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTATCAACACTACCTATAAGAAAGGTACTCCTGTTTTTAGTAGTGAAGAATGGACCTTGTTTCTAGAAGTATTTTGTTGTTCTAATAGTTCTTGTTTCCTTCATATATATATATTCATTCGTACATTGTTAAACCACTAAATATTCTAACCAGTGCGCATATTCTTTCCACAGTAGTCCTTCAAAACAATAGCATTTGGGCATTCCCCATTTATGGACACCACTTTTTACTTCTTTAATTGAGATGGAGTTTTCTTTACTACTAAGTGCTTTGCCTCTTTGGACATTCATGAAAAAGGTGAAGGCTGATTTTTTATTTGAAGATCTTTGTATGCAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCAGCTGGTTCGTATGTTAGTAACACTTGTTAGTTCCATTGCAAGTTTTCAGAAGCTATATTATACCTATCCCAAGCAGACACCACAATTCAATTTCTTGAACCAAACACCATTCTGTGCCTGCTTAATTTGATCCTTTGGACGTTCTCCAGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTGAAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAACAGATGATTGTTCTATGCTTTTCGAGAAATTAGGTAAACATCCTTACTAAGTTATTGTTCTAGCTATGAGGCCTGTTGATTGTAGATTTCAAACCTTGAAGCTACTTTGAAATTTCATATGCTATTGTTACTAAGTAACTAGGTTGTCTTACAGAAGAGACTTGCAATCTTATTCGAACAGAAGCATTTTTCCTATTTTAATGGTATATTTGTCAATAGGCCAAGAGCATATTATTTTGCGCAATAATTTGAGACACGTCATGATTATTCGAGAGCTTGAGTAGAAAGTAGTTGTTTGAAATTAGTCAATTATGCTGCAACAAGCTGTTTACATTTGATGAGGAAATATAATTTCTGGTGAGTGGTAGTTTTGGTTGGGATAGCAAACTATGCAAGGTGGAACTTGTTAGGCAGCTTTGACTGCATACCTGAGATCTGGTGTTCAATCTTGATAGTGCTGGGGACCACTGGTCCGGGATTGAAGGATCACAACGCTCTATGAATATGAGCTATTTCATGTGTCAATTATTCTACATTTCTACATATGAGATACTAGAAGCCAAGTTGACTGGAAACAGGCAACTAACCAGGGTTTGGTATTTCAGAATTCTGAAATCTTAAATTTTG]
[+] EMBL CB630044 [ gtTCGCCGGTGCCCGAGGGACCGACGGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGGGAAGAACCTCGCCGGCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGCCGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACAAAGAGAAGGTGCCGAAGGTTTTCTGGGAAATGAGCAAGGGTTCAAGATATTTTGAAAATGAACAGAGGAAAGAGGCAATTACCAAACAAAAAATCGACCATCTGCGTGCACAATGTGCAAAGCTGACTGACAATGACATATCACATTTTCAGAAGGTCGCCGAACATAAAATTTTGGAGCTGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATGCTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGGAGGGGGTAGCATGTCTATGAT ]
consensusID : consensus_10649#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2292 fasta sequence
[CCCACGGGCGGGACATTTTTTCTAAGGAAAAGAGAGGAAAAGGCAACCCCTTTCCTCGCGCGCGACCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCATTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGACGGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGGGAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGCCGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACAAAGAGAAGGTGCAGAAGAAGGTCGCCGAACATAAAATTTTGGAGCTGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATGCTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCATGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGCCTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGAGATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAGGTACGATCCCAACTTTGTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACAAAAGTCTGCTTCGATAGAGGCATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTAACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTCTGATATCAACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTATCAACACTACCTATAAGAAAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCAGCTGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTGAAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAACAGATGATTGTTCTATGCTTTTCGAGAAATTAGATAGTCTCGCAGACAATTTGGCCGATGATATGCAAAAAGAATGCCTGAAGGGAAGGACACTAACACTCAAACTAAAGACTGCCGCTTTTGAGGTCAGGACAAGAGCAGTAACCACACAAAACTATATCAACTCCAAGGAAGACATCCTGATCTACGCTAGGAAATTGCTTAAGGCTGAACTGCCTCTTTCTTTGAGATTGATGGGGTTGCGGATGTCCCAACTTCGCGATGAGAAGGATGATTCATCTACCCAAACCCAAAAGACACTAGATA-GATTTTTCCGCACGCCTGACAACTCAAATGTCATTGGAGCAAAC-AGTCCAAGCATCGGTAATACCACAGG-AGGGGATAACTATTGCACTAATGTGATGACCAAGGTCGATTATTTAGAGCATGATTCCATGGATGATCAGGCATTGTTTTTGCATGAAAAGAACTTATTTGTTCCAGAAGTAAGGAGCTCAGACAATTATAATAATGATGCTGCATCAAGCAATCCACTTATGTGTGATGGTGTTGGTGGAAAAGAATTGGATGATGACTCCTCCAGTTCGAAGGGTACACATACTGTAAAGTTTGATGGCCAGCTCACCAGCTCTAACGCAACTACTTCATCGAGTAAACCTGATCAGCTTTTCTGGATAAATGGCTACATTTGTTCCATTTGTGGATTTGAACTACCTCCAGGTTTTGAGGAGGAGAGACAAGAACATTCAGATTTCCACTTGGCTGAAATGCTTCAGCAGGAAGAGGCAGTGGACAGCACAGGCCCCCTCTCGAAAGAGAGGTTAGCTGAAAGGCCATGCTCTAGCACACCCACACCAAAGAAGAAGCTCAAGTCTTCAAAAGAAGGAAAACACATACCTATTGATGCTTTCTTTCACAAGGTTAACAAGAACTTGTAACATACTGTAGCTACCTATTCAGGCACTCTTTTTAATCCTACAGAGCGATTTGCCCACTTGAAAAACTGCTGTACATGTAACTTCATTCCATGTTCTTTTCAGACTAGCATGTAAATTGTAAATATATAACTCAAGAATCCTGTTAAATTAATTTCATAATTTATTCAAATGTCAT]
[+] EMBL AK066372 [CCCACGGGCGGGACATTTTTTCTAAGGAAAAGAGAGGAAAAGGCAACCCCTTTCCTCGCGCGCGACCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCATTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGACGGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGGGAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGCCGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACAAAGAGAAGGTGCAGAAGAAGGTCGCCGAACATAAAATTTTGGAGCTGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATGCTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCATGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGCCTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGAGATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAGGTACGATCCCAACTTTGTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACAAAAGTCTGCTTCGATAGAGGCATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTAACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTCTGATATCAACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTATCAACACTACCTATAAGAAAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCAGCTGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTGAAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAACAGATGATTGTTCTATGCTTTTCGAGAAATTAGATAGTCTCGCAGACAATTTGGCCGATGATATGCAAAAAGAATGCCTGAAGGGAAGGACACTAACACTCAAACTAAAGACTGCCGCTTTTGAGGTCAGGACAAGAGCAGTAACCACACAAAACTATATCAACTCCAAGGAAGACATCCTGATCTACGCTAGGAAATTGCTTAAGGCTGAACTGCCTCTTTCTTTGAGATTGATGGGGTTGCGGATGTCCCAACTTCGCGATGAGAAGGATGATTCATCTACCCAAACCCAAAAGACACTAGATA GATTTTTCCGCACGCCTGACAACTCAAATGTCATTGGAGCAAAC AGTCCAAGCATCGGTAATACCACAGG AGGGGATAACTATTGCACTAATGTGATGACCAAGGTCGATTATTTAGAGCATGATTCCATGGATGATCAGGCATTGTTTTTGCATGAAAAGAACTTATTTGTTCCAGAAGTAAGGAGCTCAGACAATTATAATAATGATGCTGCATCAAGCAATCCACTTATGTGTGATGGTGTTGGTGGAAAAGAATTGGATGATGACTCCTCCAGTTCGAAGGGTACACATACTGTAAAGTTTGATGGCCAGCTCACCAGCTCTAACGCAACTACTTCATCGAGTAAACCTGATCAGCTTTTCTGGATAAATGGCTACATTTGTTCCATTTGTGGATTTGAACTACCTCCAGGTTTTGAGGAGGAGAGACAAGAACATTCAGATTTCCACTTGGCTGAAATGCTTCAGCAGGAAGAGGCAGTGGACAGCACAGGCCCCCTCTCGAAAGAGAGGTTAGCTGAAAGGCCATGCTCTAGCACACCCACACCAAAGAAGAAGCTCAAGTCTTCAAAAGAAGGAAAACACATACCTATTGATGCTTTCTTTCACAAGGTTAACAAGAACTTGTAACATACTGTAGCTACCTATTCAGGCACTCTTTTTAATCCTACAGAGCGATTTGCCCACTTGAAAAACTGCTGTACATGTAACTTCATTCCATGTTCTTTTCAGACTAGCATGTAAATTGTAAATATATAACTCAAGAATCCTGTTAAATTAATTTCATAATTTATTCAAATGTCAT]
[+] EMBL CA763818 [ CTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTAACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTCTGATATCAACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTATCAACACTACCTATAAGAAAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCAGCTGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTGAAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAA ]
[+] EMBL C27577 [ ACGCTAGGAAATTGCTTAAGGCTGAACTGCCTCTNTCTTTGAGATTGATGGGGTTGCGGATGTCCCAACTACGCGATGAGAAGGATGATTCATCTACCCAAACCCAAAAGACACTAGNTANGATTTTTCCGCACGGCTNACANCTCAAATGTCATTGGAGCAAACAAGTCCAAGCATCGGTAATACCACAGGNTGGGGATAACTATTGCACTA ]
[+] EMBL AU085743 [ CATGCTCTNGCACACCCACACCAAAGAAGAAGCTCAAGTCTTCAAAAGAAGGAAAACACATACCTATTGATGCTTTCTTTCACAAGGTTAACAAGAACTTGTAACATACTGTAGCTACCTATTCAGGCACTCTTTTTAATCCTACAGAGCGATTTGCCCACTTGAAAAACTGCTGTACATGTAACTTCATTCCATGTTCTTTTCAGACTAGCATGTAAATTGTAAATATATAACTCAAGAATCCTGTTAAATTAATTTCATAATTTATTCAAAaa ]
consensusID : consensus_10649#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[AGTTATATATTTACAATTTACATGCTAGTCTGAAAAGAACATGGAATGAAGTTACATGTACAGCAGTTTTTCAAGTGGGCAAATCGCTCTGTAGGATTAAAAAGAGTGCCTGAATAGGTACCTACAGTATGTTACAAGTTCTTGTTAACCTTGTGAAAGAAAGCATCAATAGGTATGTGTTTTCCTTCTTTTGAAGACTTGAGCTTCTTCTTTGGTGTGGGTGTGCTAGAGCATGGCCTTTCAGCTAACCTGCTGAATACACAAAAGGTTCATACCCATGAAATTCATCTGATGTCTACATGATAACAGCTCCACAGGGAAAAAAAAGGTTCATACCCATGAAATTCTTCATCTCAGCTAATTTGTTTTCAAATAACCATGGCAAAAGGCAACTCACCCACAGTAATAATCCCAGTAAAACACTTCAGGATTTACATCTCGTTAAATAATATTTATTACGTCACTGAACTAAAGCAGATCAAGAAATAACATAGGGATATCTATGAGCGTGTGGCAATAGATACATACCTCTCTTTCGAGAGGGGGCCTGTGCTGTCCACTGCCTCTTCCTGCTGAAGCATTTCAGCCAAGTGGTAATCTGAATGTTCTTGTCTCTCCTCCTCAAAACCTGGAGGTAGCTCAAATCCACAAATGGAACAAATGTAGCCATTTATCCAGAA]
[+] EMBL CB630045 [AGTTATATATTTACAATTTACATGCTAGTCTGAAAAGAACATGGAATGAAGTTACATGTACAGCAGTTTTTCAAGTGGGCAAATCGCTCTGTAGGATTAAAAAGAGTGCCTGAATAGGTACCTACAGTATGTTACAAGTTCTTGTTAACCTTGTGAAAGAAAGCATCAATAGGTATGTGTTTTCCTTCTTTTGAAGACTTGAGCTTCTTCTTTGGTGTGGGTGTGCTAGAGCATGGCCTTTCAGCTAACCTGCTGAATACACAAAAGGTTCATACCCATGAAATTCATCTGATGTCTACATGATAACAGCTCCACAGGGAAAAAAAAGGTTCATACCCATGAAATTCTTCATCTCAGCTAATTTGTTTTCAAATAACCATGGCAAAAGGCAACTCACCCACAGTAATAATCCCAGTAAAACACTTCAGGATTTACATCTCGTTAAATAATATTTATTACGTCACTGAACTAAAGCAGATCAAGAAATAACATAGGGATATCTATGAGCGTGTGGCAATAGATACATACCTCTCTTTCGAGAGGGGGCCTGTGCTGTCCACTGCCTCTTCCTGCTGAAGCATTTCAGCCAAGTGGTAATCTGAATGTTCTTGTCTCTCCTCCTCAAAACCTGGAGGTAGCTCAAATCCACAAATGGAACAAATGTAGCCATTTATCCAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10649#0 ------------------------------------------------------------
consensus_10649#1 CCCACGGGCGGGACATTTTTTCTAAGGAAAAGAGAGGAAAAGGCAACCCCTTTCCTCGCG 60
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 -----CCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCA 55
consensus_10649#1 CGCGACCGCTGGCTGGCGGCGGAGCCGACCTCACCTCGCCGGAGTTTAATCCCCCCTCCA 120
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 TTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGAC 115
consensus_10649#1 TTCTTCCTCGTCCTGATTGCCAACGACGGCGGAGAGCTCGCCGGTGCCCGACGTACCGAC 180
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGG 175
consensus_10649#1 GGCTCGATCAGTCCTTCCCATCCTCTGTTAGCCTCGCGTGACGCCCGCCTGCGGTGGGGG 240
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGC 235
consensus_10649#1 GAAGAACCTCGCCGTCGCACGCGATGGCGGGGACGCCACCCGATGGCGGAGGAGATAGGC 300
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACA 295
consensus_10649#1 CGTGGGAGTCGTACCACACCGCCTACACCAACGCCAAAGCTGGAATGGAGGGAGTTGACA 360
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 AAGAGAAGGTGCAGAAGGTAATCTACGAAATGAGCAAGGGTTCAAAATATTTTGAAAATG 355
consensus_10649#1 AAGAGAAGGTGCAGAAG------------------------------------------- 377
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 AACAGAGGAAAGAGGCAATTACCAAACAAAAAATCGACCATCTGCGTGCACAATGTGCAA 415
consensus_10649#1 ------------------------------------------------------------
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 AGCTGACTGACAATGACATATCACATTTTCAGAAGGTCGCCGAACATAAAATTTTGGAGC 475
consensus_10649#1 --------------------------------AAGGTCGCCGAACATAAAATTTTGGAGC 405
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 TGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATG 535
consensus_10649#1 TGGAAGCTTCACGGGATCTTTCAAAGATATGGCTTCACACCGACATGGATGCCTTTTATG 465
consensus_10649#2 ------------------------------------AGTTATATATTTACAATTTACATG 24
* * ** * ** ***
consensus_10649#0 CTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCA 595
consensus_10649#1 CTACTGTCGAGATATTGGAAAATCCATCCTTGAAGGGAAAACCATTGGCAGTGGGTAGCA 525
consensus_10649#2 CTAGTCTGAAAAGAACATGGAATGAAGTTACATGTACAGCAGTTTTTCAAGTGGGCAAAT 84
*** * * * * * *** * * * ** ****** *
consensus_10649#0 TGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGC 655
consensus_10649#1 TGTCTATGATAGCTACTGCCAGTTATGAGGCACGGAAGTTTGGAGTTCGTGCAGCAATGC 585
consensus_10649#2 CGCTCTGTAGGATTAAAAAGAGTGCCT--GAATAGGTACCTACAGT--ATGTTACAAGTT 140
* * ** *** * * * * *** ** ***
consensus_10649#0 CTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGA 715
consensus_10649#1 CTGGTTTTATTGGCTGTAAATTATGTCCTGAGTTGGTTTTTGTCCGTCCAAATTTTGAGA 645
consensus_10649#2 CTTGTTAACCT---TGTGAAAGAAAGCATCAATAGGTATGTGTTTTCCTTCTTTTGAAGA 197
** *** * *** ** * * * * * *** * *** * *** ***
consensus_10649#0 GATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAG-GTACGATCCCAACTTT 774
consensus_10649#1 GATACACTTATTATAGTGAATTGACAAGAAAAGTTTTCCAAAG-GTACGATCCCAACTTT 704
consensus_10649#2 CTTGAGCTTCTTCT------TTGGTGTGG---GTGTGCTAGAGCATGGCCTTTCAGCTAA 248
* *** ** * *** * ** * * * ** * * ** **
consensus_10649#0 GTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACGAAAGTCTGCTTCGATAGAGGC 834
consensus_10649#1 GTTGCAACAAGCCTAGATGAAGCATATCTCAATATTACAAAAGTCTGCTTCGATAGAGGC 764
consensus_10649#2 CCTGCTGAATACACAAAAGGTTCATACCC-------ATGAAATTC--ATCTGATGTCTAC 299
*** * * * * * **** * * *** ** * *** *
consensus_10649#0 ATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTA 894
consensus_10649#1 ATTACTGGTGAGGAGGTTGCTACAGAACTTAGGGGTGCCATTCACCAGGAAACCGGTCTA 824
consensus_10649#2 ATGAT-----AACAGCTCCACAGGGAAAAAAAAGGT-TCATAC-CCATGAAATTC-TTCA 351
** * * ** * * *** * *** *** * *** **** * *
consensus_10649#0 ACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTC--TGATATCA 952
consensus_10649#1 ACTTGTAGTGCTGGGGTAGCTCCAAACCGCATGATTGCTAAGGTTTGCTC--TGATATCA 882
consensus_10649#2 TCTCA----GCTAATTTGTTTTCAAAT--AACCATGGCAAAAGGCAACTCACCCACAGTA 405
** *** * * **** * ** ** ** * *** * * *
consensus_10649#0 ACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTAT 1012
consensus_10649#1 ACAAGCCTAATGGACAGTTCATTTTGCCGAATGACCAAGAAGCTGTGACAACATTTGTAT 942
consensus_10649#2 ATAATCCCAGTAAA------ACACTTCAGGATTTACATCTCGTTA-AATAATATTTATTA 458
* ** ** * * * * * * * ** ** * * * ** **** *
consensus_10649#0 CAACACTACCTATAAGAAAGGTACTCCTGTTTTTAGTAGTGA-AGAATGGACCTTGTTTC 1071
consensus_10649#1 CAACACTACCTATAAGAAAGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTC 1002
consensus_10649#2 CGTCACTGAACTAAAGCAGATCAAGAAATAACATAGGGATATCTATGAGCGTGTGGCAAT 518
* **** *** * * * *
consensus_10649#0 TAGA----AGTATTTTGTTGTTCTAATAGTTCTTGT-------TTCCTTCATATATATAT 1120
consensus_10649#1 AGGTTCTTGGTATCAGTACATGCCAGGAGATGCTGCAAAAGGCTTCTTTCTTATGTGCTC 1062
consensus_10649#2 AGAT-----ACATACCTCTCTTTCGAGAGGGGGCCTG------TGCTGTCCACTGC-CTC 566
** * ** * * ** *
consensus_10649#0 ATTCATTCGTACATTG-----------TTAAACCACTAAATATT---CTAACCAGTGCGC 1166
consensus_10649#1 TTTTTTCTGAATCCTCAGCTGATTTCTTTATTTCGGTTGGTCTTGGACTAGGCGGTACTG 1122
consensus_10649#2 TTCCTGCTGAAGCAT------------TTCAGCCAAGTGGTAAT---CTGAATGTTCTTG 611
* * * * ** * * * ** *
consensus_10649#0 ATATTCTTTCCACAGTAGTCCTTCAAAACAATAGCATTTGGGCA---TTCCCCATTTATG 1223
consensus_10649#1 AAACTCCTGA-GCAAAGACTAAGGAAAAGTATAAGTTGCGAGCGAACTTTCAGGGCAACA 1181
consensus_10649#2 TCTCTCCTCC-TCAAAACCTGGAGGTAGCTCAAATCCACAAATGGA-----ACAAATGTA 665
** * ** * *
consensus_10649#0 GAC-ACCACTTTTTACTTCTTTAATTGAGATGGAGTTTTCTTTACTACTAAGTGCTTTGC 1282
consensus_10649#1 GATGATTGTTCTATGCTTTTCGAGAAATTAGATAGTCTCGCAGACAATTTGGCCGATGAT 1241
consensus_10649#2 GCCATTTATCCAGAA--------------------------------------------- 680
*
consensus_10649#0 CTCTTTGGACATTCATGAAAAAGGTGAAGGCTGATTTTTTATTTGAAGATCTTTGTATGC 1342
consensus_10649#1 ATGCAAAAAGAATGCCTGAAGGGAAGGACACTAACACTCAAACTAAAGACTGCCGCTTTT 1301
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 AGATAGGTGGTATAGGCAAAGTAACAGAACAAATGTTACGTCAGGTTCTTGGTATCAGTA 1402
consensus_10649#1 GAG--GTCAGGACAAGAGCAGTAACCACACAAA-ACTATATCAACTCCAAGG----AAGA 1354
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CATGCCAGGAGATGCTGCAAAAG-GCTTCTTTCTTATGTGCTCTTTTTTCTGAATCCTCA 1461
consensus_10649#1 CATCCTGATCTACGCTAGGAAATTGCTTAAGGCTGAACTGCCTCTTTCTTTGAGATTGAT 1414
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GCTGGTTCGTATGTTAGTAACACTTGTTAG---------TTCCATTGCAAGTTTTCAGAA 1512
consensus_10649#1 GGGGTTGCGGATGTCCCAACTTCGCGATGAGAAGGATGATTCATCTACCCAAACCCAAAA 1474
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GCTATATTATACCTATCCCAAGCAGACACCACAATTCAATTTC--TTGAACCAAACA--C 1568
consensus_10649#1 GACACTAGATAGATTTTTCC-GCACGCCTGACAACTCAAATGTCATTGGAGCAAACAGTC 1533
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CATTCTGTGCCTGCTTAATTTGATCCTTTGGACGTTCTCCAGATTTCTTTATTTCGGTTG 1628
consensus_10649#1 CAAGCATCGGTAATACCACAGGAGGGGATAACTATTGCACTAATGTGATGACCAAGGTCG 1593
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GTCTTGGACTAGGCGGTACTG-AAACTCCTGAGCAAAGACTAAGGAAAAGTATAAGTTGC 1687
consensus_10649#1 ATTATTTAGAGCATGATTCCATGGATGATCAGGCATTGTTTTTGCATGAAAAGAACTTAT 1653
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GAG--CGAACTTTCAGGGCAACAGATGATTGTTCTA-TGCTTTTCGAGAAATTAGGTAAA 1744
consensus_10649#1 TTGTTCCAGAAGTAAGGAGCTCAGACAATTATAATAATGATGCTGCATCAAGCAA-TCCA 1712
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CATCCTTACTAAGTTATTGTTCTAGCTATGAGGCCTGTTGATTG-TAGATTTCAAACCTT 1803
consensus_10649#1 CTTATGTGTGATGGTGTTGGTGGAAAAGAATTGGATGATGACTCCTCCAGTTCGAAGGGT 1772
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GAAGCTACTTTGAAATTTCATATGCTATT-----GTTACTAAGTAACTAGGTTGTCTTAC 1858
consensus_10649#1 ACACATACTGTAAAGTTTGATGGCCAGCTCACCAGCTCTAACGCAACTACTTCATCGAGT 1832
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 AGAAGAGACTTGCAATCTTATTCGAACAGAAGCATTTTTCCTATTTTAATGGTATATTTG 1918
consensus_10649#1 AAACCTGATCAGCTTTTCTGGATAAATGGCTACATTTGTTCCATTTGTGGATTTGAACTA 1892
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 TCAATAGGCCAAGAGCATATTATTTTGCGCAATAATTTGAGACACGTCATGATTATTCGA 1978
consensus_10649#1 CCTCCAGGTTTTGAGGAGGAGAG---ACAAGAACATTCAGATTTCCACTTGGCTG---AA 1946
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 GAGCTTGAGTAGAAAGTAGTTGTTTGAA--ATTAGTCAATTATGCTGCAACAAGCT-GTT 2035
consensus_10649#1 ATGCTTCAGCAGGAAGAGGCAGTGGACAGCACAGGCCCCCTCTCGAAAGAGAGGTTAGCT 2006
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 TACATTTGATGAGGAAATATAATTTCTGGTGAGTGGTAGTTTTGGTTGGGATAGCAAACT 2095
consensus_10649#1 GAAAGGCCATGCTCTAGCACACCCACACCAAAGAAGAAGCTCAAGTCTTCAAAAGAAGGA 2066
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 ATGCAAGGTGGAACTTGTTAGGCAGCTTTGACTGCATACCTGAGATCTGGTGTTCAATCT 2155
consensus_10649#1 AAACACATACCTATTGAT--GCTTTCTTTCACAAGGTTAACAAGAACTTGTAACATACTG 2124
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 TGATAGTGCTGGGGACCACTGGTCCGGGATTGAAGGATCACAACGCTCTATGAATATGAG 2215
consensus_10649#1 TAGCTACCTATTCAGGCACTCTTTTTAATCCTACAGAGCGATTTGCCCACTTGAAA--AA 2182
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CTATTTCATGTGTCAATT-ATTCTACATTTCTACATATGAGATACTAGAAGCCAAGTTGA 2274
consensus_10649#1 CTGCTGTACATGTAACTTCATTCCATGTTCTTTTC------AGACTAG----CATGTAAA 2232
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 CTGGAAACAGGCAACTAACCAGGGTTTGGTATTTCAGAATTCTGAAATCTT-AAATTTTG 2333
consensus_10649#1 TTGTAAATATATAACTCAAGAAT-CCTGTTAAATTAATTTCATAATTTATTCAAATGTCA 2291
consensus_10649#2 ------------------------------------------------------------
consensus_10649#0 -
consensus_10649#1 T 2292
consensus_10649#2 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||