cluster # 10669

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Oryza sativa
cluster # 10669 cluster # 10669 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10669#0 length = 2587 sequences # 7

consensus_10669#1 length = 506 sequences # 1

consensusID : consensus_10669#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2587
fasta sequence

                              [CAGCCCGCAGCCTAGCCTACCCTCTCTCTCTCCCCCCTCCTCAAGCTGTGCGCGATTCGCTTCCTCACTCCCAAACCCTAACCCCACCGCGACGCTCCCCCCCATGGCTGACGTCATCGACCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCCGGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGCCACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCCCCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGGCGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTCCCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGACCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGGATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAGGTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCCTGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGATGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCACTACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTACCATCCGACCAACTTGTCATCTGTTATCGACAGGAGGAATGATAGTTGTAAGGCAACAGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCCGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGATATGG--TAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGAACCAAACGGACCTCCTCATGCC-AACCCAGGAGTGCTTGGACCAATGAT-GGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTT-CGTCAAGATCCTCGCCGTTT-GCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTTGCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTTGGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGTGTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGCACCACGTGCACTTGTAGTCCCAAGAAGTGTTGAACGCAGTTTGATAAAATGTAATTTTTGAGACTTTATACGACAAAAAAGGGACTGACAACATTTTACTTCTCCATTGGAAGTAATTAATTTAAAA]

[+] EMBL AK120947             [CAGCCCGCAGCCTAGCCTACCCTCTCTCTCTCCCCCCTCCTCAAGCTGTGCGCGATTCGCTTCCTCACTCCCAAACCCTAACCCCACCGCGACGCTCCCCCCCATGGCTGACGTCATCGACCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCCGGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGCCACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCCCCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGGCGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTCCCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGACCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGGATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAGGTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCCTGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGATGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCACTACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTACCATCCGACCAACTTGTCATCTGTTATCGACAGGAGGAATGATAGTTGTAAGGCAACAGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCCGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGATATGG  TAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGAACCAAACGGACCTCCTCATGCC AACCCAGGAGTGCTTGGACCAATGAT GGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTT CGTCAAGATCCTCGCCGTTT GCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTTGCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTTGGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGTGTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGCACCACGTGCACTTGTAGTCCCAAGAAGTGTTGAACGCAGTTTGATAAAATGTAATTTTTGAG                                                                 ]
[+] EMBL CB676934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAATCTCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCCTGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGATGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCACTACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTACCATCCGACCAACTTGTCATCTGTTATTGACAGGAGGAATGATAGTTGTAAGGCAACAGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF304943             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCAAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGCGGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAGAAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCATCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGTGCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGACAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGGCTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTTATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF314180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGA ATGGNNTGGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGAACCAAACGGACCTCCTCATGCC AACCCAGGAGTGCTTGGACCAATGATGGGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTT CGTCAAGATCCTCGCCGTTTGGCGAAGTTACAATGAC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB676935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAACAGTCTGCGCCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGCAGAGAGAGATGGAAGCAGATATGG  TAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGATGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCATGAACTTCCCGCTCCGCCAATTTTGATGCCTATTCTTGGTGCTGGTCCTTTGGGTCCATTTGTTCCTGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACTTCCATTTGAACCAAACGGACCTCCTCATGCC AACCCAGGAGTGCTTGGACCAATGAT GGGTGGTCTTGCGCCAATTATAACCATGCCTCCATCTTTT CGTCAAGATCCTCGCCGTTT GCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTTGCCCTGGTGTAATTGTAATTTGCCAATCACAACTTTAGCATCTCCGGTGTAGTCTAGGTTGGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGACCAATAGAGCATTTTTTGAGGTGTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGCACCACGTGCACTTGTAGTCCCAAGAACTGTTGAACGCAAGGGGATAAAACGTAA TTTTGAGACTTTATACGACAAAAAAGGGA                                           ]
[+] EMBL D42875               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gnAAGGCCCGCCACCTCCATTTGAACAAAACGGACCTCCTCATGCCAAACCCAGGAGTGC TGGACCAATGAT GGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTTCCGTCAAGAACCTCGCCGTTT GCGAAGTTACAATGACCTTGATGCTCCGGACGCGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTTGCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTTGGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGTGTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACT NG ACCACGT                                                                                                                        ]
[-] EMBL CF314181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCAAACGGACCTCCTCATGCC AACCCAGGAGTGCTTGGACCAATGAT GGGTGGTCCTGCGCCAATTATAACCATGCCTCCATCTTTT CGTCAAGATCCTCGCCGTTT GCGAAGTTACAATGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTTGCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTTGGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGTGTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGCACCACGTGCACTTGTAGTCCCAAGAAGTGTTGAACGCAGTTTGATAAAATGTAATTTTTGAGACTAAATATGACAACGTTTTAGCTGACAACATTTTACTTCTCCATTGGAAGTAATTAATTTAAAA]




>consensus_10669#0
CAGCCCGCAGCCTAGCCTACCCTCTCTCTCTCCCCCCTCCTCAAGCTGTGCGCGATTCGC
TTCCTCACTCCCAAACCCTAACCCCACCGCGACGCTCCCCCCCATGGCTGACGTCATCGA
CCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCC
GGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGC
CACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCC
CCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGG
CGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTC
CCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGA
CCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGG
ATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAG
GTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCC
TGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGA
TGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCAC
TACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTA
CCATCCGACCAACTTGTCATCTGTTATCGACAGGAGGAATGATAGTTGTAAGGCAACAGC
AAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGC
GGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAG
AAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCA
TCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGT
GCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGA
CAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGG
CTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTT
ATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAG
TCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTG
GGAAAAGAAGGTGGATACTTTCCGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAAT
ATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAG
GAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAA
ACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGT
GTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCC
TAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAG
ACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGC
AGAGAGAGATGGAAGCAGATATGGTAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGA
TGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACT
TCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCC
TGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGA
ACCAAACGGACCTCCTCATGCCAACCCAGGAGTGCTTGGACCAATGATGGGTGGTCCTGC
GCCAATTATAACCATGCCTCCATCTTTTCGTCAAGATCCTCGCCGTTTGCGAAGTTACAA
TGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTT
GCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTT
GGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGT
GTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGC
ACCACGTGCACTTGTAGTCCCAAGAAGTGTTGAACGCAGTTTGATAAAATGTAATTTTTG
AGACTTTATACGACAAAAAAGGGACTGACAACATTTTACTTCTCCATTGGAAGTAATTAA
TTTAAAA

consensusID : consensus_10669#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 506
fasta sequence

                              [CTCGTGCCGAATCGCACGAGGGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTA]

[+] EMBL CF324140             [CTCGTGCCGAATCGCACGAGGGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATACTTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTA]




>consensus_10669#1
CTCGTGCCGAATCGCACGAGGGACAAATGAAGCAAAAGGCAGTCGCCATGTCAGAGCAGA
CAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTGGGAAAAGAAGGTGGATAC
TTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAATATTAGCAGCCAAGGACAA
AATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAGGAAGATAAGGGATGAAAA
ATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAAACTTTTCCATGCTCCTGA
GTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGTGTTAGAGTTGACTTCCAA
AGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCCTAATGCACCTGGTGGAAC
TCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAGACCTGGTATGGATAATCG
TCTGAGATATGACCGTGCCAATCGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10669#0      CAGCCCGCAGCCTAGCCTACCCTCTCTCTCTCCCCCCTCCTCAAGCTGTGCGCGATTCGC 60
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TTCCTCACTCCCAAACCCTAACCCCACCGCGACGCTCCCCCCCATGGCTGACGTCATCGA 120
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCCCGCCTCCACCGAGGCCCCCCGCGCGCGCCGCCCGCCGCCGCCTCCGCCCGACAGCCC 180
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GGAGGGCCGCTCGCCGCCGCTCCCGCCCCCGCCCCCCGGTGGCCCGCCGCAGCCGGCGGC 240
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CACCCGCAAGCGGAGCCGCTCGCCACCGCCGCCTCCCCCGCCGCCCTCCCTCCCGCCGCC 300
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCCGCCGCTCGGCTCGTCGCGCCCCGAGCGCTACCGCGACAACCACCACCGGGGAGGAGG 360
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CGGTGGCCGGGGTGGGGGTAGTTCCAGCCCCCCGCCGTATCGGAGTGGCCGCCGCCACTC 420
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCCGTCGAGGAGATCCCCTTCGCCGCCGTTCAAGAGGTCGCGGCGGGACGACGGGTACGA 480
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCGCCGTGGCGGCCGTGGGAGCCCGCCGCCGCGGTACGGGTACGGCGACAGGAGGTATGG 540
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      ATATGACCACGAGCGTGGTGGAGGCAGAGGTGGGTATGATGATGACCGATACCATGGCAG 600
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GTATCAAAATCGCGCAGCAGATTGGGCCGATTCAGGGTTTGGGGCATCCAATGATGGTCC 660
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGGAATTACCCAAAGGGAAGGACTGATGACTTACAAACAGTTCATCCAAGTTCTTGAGGA 720
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGATATTTCACCTGCTGAAGCTGAGAAACGGTATCAAGAATACAGGACAGAGTACATCAC 780
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TACTCAAAAACGTGCTTATTTTGACCTTAACAAGAATGATGATCGGTTGAAAGACAAGTA 840
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CCATCCGACCAACTTGTCATCTGTTATCGACAGGAGGAATGATAGTTGTAAGGCAACAGC 900
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      AAAGGATTTCTTTCATGATTTGCAAAATGGAACTCTGGACCTTGGCCCTGGAATAACTGC 960
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GGCTGCAGCAAGTGGCAGTGATGGAAATTCTGATGATGATGGAGACAGTGACAAGAGAAG 1020
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      AAAGCATGGCAGGGGTTCCTCAAAAGAAACAGACCCTCTTTCTGGTGCTCCCGTGGCTCA 1080
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TCCAGTTAGCTCTGAATCTCGACGGGTTCAAGTTGACATTGAACAAGCTCTAGCCCTTGT 1140
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GCGTAAGCTTGACACTGAGAAGGGTATTGTGGGGAATATCCTATCAAGTGGCGATCATGA 1200
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CAAATCAGATGTAGACAAGTCTCATATTGGATCTATGGGGCCTATAATTATAATCCGAGG 1260
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      CTTAACCACTGTCAAAGGCCTTGAAGGTGTTGAGCTCCTAGATACTCTTCTTACCTATTT 1320
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      ATGGCGTATTCATGGTGTTGATTACTATGGCATGTCTGAGACAAATGAAGCAAAAGGCAG 1380
consensus_10669#1      -----------CTCGTGCCGA-----ATCGCACGA--GGGACAAATGAAGCAAAAGGCAG 42
                                   * ***  **     ** *** *   * *********************

consensus_10669#0      TCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTG 1440
consensus_10669#1      TCGCCATGTCAGAGCAGACAATAAGACGTCTAATACAACCAATATTAATGCCGCTGACTG 102
                       ************************************************************

consensus_10669#0      GGAAAAGAAGGTGGATACTTTCCGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAAT 1500
consensus_10669#1      GGAAAAGAAGGTGGATACTTTCTGGCAAGAAAGGCTGAGAGGTCAGGACCCCATGGTAAT 162
                       ********************** *************************************

consensus_10669#0      ATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAG 1560
consensus_10669#1      ATTAGCAGCCAAGGACAAAATCGATGCAGCAGCTGTGGAAGTTCTGGAACCTTATGTCAG 222
                       ************************************************************

consensus_10669#0      GAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAA 1620
consensus_10669#1      GAAGATAAGGGATGAAAAATATGGTTGGAAATATGGCTGTGGAGCTAAGGGTTGTACGAA 282
                       ************************************************************

consensus_10669#0      ACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGT 1680
consensus_10669#1      ACTTTTCCATGCTCCTGAGTTCGTTCACAAGCATTTGAGGCTGAAGCATCCAGAGCTTGT 342
                       ************************************************************

consensus_10669#0      GTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCC 1740
consensus_10669#1      GTTAGAGTTGACTTCCAAAGTCCGAGAGGATCTCTATTTCCAAAATTACATGAATGATCC 402
                       ************************************************************

consensus_10669#0      TAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAG 1800
consensus_10669#1      TAATGCACCTGGTGGAACTCCAGTTATGCAACAGTCTGCACCAGACAAATCAAGACAGAG 462
                       ************************************************************

consensus_10669#0      ACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTAGAGAATATGATAGGGC 1860
consensus_10669#1      ACCTGGTATGGATAATCGTCTGAGATATGACCGTGCCAATCGTA---------------- 506
                       ********************************************                

consensus_10669#0      AGAGAGAGATGGAAGCAGATATGGTAGAGGTGATCGTTCTCCAAGTCTTGATGGCGCTGA 1920
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGATCAGATGTTTGATGCTTTCCGTGGGCGAGGTCCAAATGCTCCTTTTGTTCCTGAACT 1980
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TCCCGCTCCGCCAATTTTGATGCCTATTCCTGGTGCTGGTCCTTTGGGTCCATTTGTTCC 2040
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGCACCTCCAGAAATAGCCATGCATATGCTGAGAGAGCAAGGGCCGCCACCTCCATTTGA 2100
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      ACCAAACGGACCTCCTCATGCCAACCCAGGAGTGCTTGGACCAATGATGGGTGGTCCTGC 2160
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GCCAATTATAACCATGCCTCCATCTTTTCGTCAAGATCCTCGCCGTTTGCGAAGTTACAA 2220
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TGACCTTGATGCTCCGGACGAGGAAGTTACCGTTCTTGACTACAGAAGTTTGTAGAGCTT 2280
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GCCCTGGTGTAATTGTAATTTGCCAATCACAACTCTAGCATCTCCGGTCTAGTCTAGGTT 2340
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GGTGATGTATTCTTTTTCAGACATAGGGGATGTCATGAACAATAGAGCATTTTTTGAGGT 2400
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      GTAATGCGTCAGAAACTACTGTTGTAATTTCAAATGGCAACATCTGTTATTGAACTGTGC 2460
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      ACCACGTGCACTTGTAGTCCCAAGAAGTGTTGAACGCAGTTTGATAAAATGTAATTTTTG 2520
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      AGACTTTATACGACAAAAAAGGGACTGACAACATTTTACTTCTCCATTGGAAGTAATTAA 2580
consensus_10669#1      ------------------------------------------------------------
                                                                                   

consensus_10669#0      TTTAAAA 2587
consensus_10669#1      -------