cluster # 10681

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Oryza sativa
cluster # 10681 cluster # 10681 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10681#0 length = 677 sequences # 8
consensusID : consensus_10681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 677
fasta sequence
                              [CTTCTTCCTCGTTCACAGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG-TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC-TCACACTGGC-TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT-TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC-TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCA]

[+] EMBL AK120859             [CTTCTTCCTCGTTCACAGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCA]
[+] EMBL OSC19131             [                AGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGNGACGCTNTGGCTGACTGGGGTGGCGANCTCGATCGTGTACAACTGGTCGAGGCCCGGCATGAAGACCAGNG TCAAGNTCATCCACGNCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTNGCTCTGCACTTGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAA NAGT TTATCACACCTGAGATCAANCCACAAA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C97312               [                  CAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAnggtttc                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C27791               [                   AGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAANATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGANG  TT TCATCACACCTTAGAGCANCCCACAAAAAG ATAG GGACGTTGTGTACTTA                                                                                                                                                                                                                                                                                    ]
[+] EMBL D43130               [                      CACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCNTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGCTTGCATTGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF306934             [                            CAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTAaaaaaaaaa                          ]
[+] EMBL C28034               [                                                               GGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGA CACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCG TCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCC TCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGG CAGGTTCAGGATCAAGAGTTCATCAGTATGCGA  NNGTNTCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGNCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTCTTGAATCTCCTACGTACTGTCTGTTTT CCTTCTCTGCCTG TTTCTGTATAAG                                                                                                                                                                          ]
[+] EMBL C97313               [                                                                                                                                                              tGCTGACTGGGTTGCCAACCTCGATCGCGTACAATTGGTCGAGCCCCGGCATGAAGACCAGCGTTCAAGATCACCCACGCCAGNTTGCATGCTCAGGCCCTTCACACTGGC TGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGT TCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTC TGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATAaaaaaa                                                                           ]




>consensus_10681#0
CTTCTTCCTCGTTCACAGCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAG
CTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTG
GGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTC
GATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCGTCAAGATCATCCACGCCAG
GTTGCATGCTCAGGCCCTCACACTGGCTGCATTGGCTGGCTCTGCACTGGTGGAGTACTA
CGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGTTCATCACACC
TGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATC
GATATGATTTCCTACGCACAAATTCTGTGGCGTCTGAATCTCCTACGTACTGTCTGTTTT
CCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGA
CGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATT
TGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGA
GGCTTTTTTTTAAATCA
clustalw multiple alignements is not computed in this case