cluster # 10684

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Oryza sativa
cluster # 10684 cluster # 10684 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10684#0 length = 2460 sequences # 7

consensus_10684#1 length = 806 sequences # 1

consensusID : consensus_10684#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2460
fasta sequence

                              [ACATCATCCCTTCCTTCCCTCCCCTTCCCTGCCAAACTCCCAGCTTCGCGCTGCCTCGCTGC--CGCTGCCGCTGCCGCCGCCGCCGCGACCCCCACTTCTCCGCCAGCAAAGCGAGCTGCTCTGCTCCGGTTGCCTTCCTCCCTAAGCCTGCTCTGCTCGCGGGCACCAGATTCGGCGGGCAGCGAAGCAGACAGCTCTCTCCGCCCCTGCCTTTTCTGTTTCTTGATTAGTATAATATCAATTAGGAGGCTTTTCTTTGCTTTCGATGGGTGTGTGCGTGCGTGTTGGTAATTTTGATTAGTTAGCGGCCCATCCTAGCCACGCGACGCCGATCTCCAGGGCGCGGCTGTTCTTGCCAAACCGCAACCACCACTAGCCCCCACTTCGTCCGGTTTTAATTTTCAATTATCTTGGCAGTTCGTGAGCCTTTCGTTTTCTTGGGGCTCCAGGGTTTCGCGTCTCTCTCTGGTTTGGACTTTGAGACTTGACGACGCTCTGGTGAGCGGGTTGATCGGCGTTGAGGAAGAGATTGGGCGGAAGGTTGTCGATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCTGCCTTTCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGCATGTGATCTGGACATACTACTGCATCATCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGATGGAACATGGAGTACTATAACAGGAAGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCATATTTTTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAATAAGAGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATGGAATAATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGAAGCGGCTGATCGAAGACTTAGTCGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGCCATTTGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCTCCATCATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGAATCCTCGCTTATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAAATGATGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTTTAAATACCGGAAAAATGAAGCTTCGACAGAGGGTGGTTCATTATCAAGGCCTGCCTCATTTAAGGACAAGCAAGACGGGAAGAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCGTTTAAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGAC-CGGTGTATGAACTAATTCTAACCACTCTTGAATGAAATGGATGTTGCAAGATTCTGTGTTTTGGAAAAAA]

[+] EMBL CB628605             [ACATCATCCCTTCCTTCCCTCCCCTTCCCTGCCAAACTCCCAGCTTCGCGCTGCCTCGCTGC  CGCTGCCGCTGCCGCCGCCGCCGCGACCCCCACTTCTCCGCCAGCAAAGCGAGCTGCTCTGCTCCGGTTGCCTTCCTCCCTAAGCCTGCTCTGCTCGCGGGCACCAGATTCGGCGGGCAGCGAAGCAGACAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK072807             [                                                         GCTGCCTCGCTGCCGCTGCCGCCGCCGCCGCGACCCCCACTTCTCCGCCAGCAAAGCGAGCTGCTCTGCTCCGGTTGCCTTCCTCCCTAAGCCTGCTCTGCTCGCGGGCACCAGATTCGGCGGGCAGCGAAGCAGACAGCTCTCTCCGCCCCTGCCTTTTCTGTTTCTTGATTAGTATAATATCAATTAGGAGGCTTTTCTTTGCTTTCGATGGGTGTGTGCGTGCGTGTTGGTAATTTTGATTAGTTAGCGGCCCATCCTAGCCACGCGACGCCGATCTCCAGGGCGCGGCTGTTCTTGCCAAACCGCAACCACCACTAGCCCCCACTTCGTCCGGTTTTAATTTTCAATTATCTTGGCAGTTCGTGAGCCTTTCGTTTTCTTGGGGCTCCAGGGTTTCGCGTCTCTCTCTGGTTTGGACTTTGAGACTTGACGACGCTCTGGTGAGCGGGTTGATCGGCGTTGAGGAAGAGATTGGGCGGAAGGTTGTCGATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCTGCCTTTCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGCATGTGATCTGGACATACTACTGCATCATCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGATGGAACATGGAGTACTATAACAGGAAGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCATATTTTTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAATAAGAGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATGGAATAATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGAAGCGGCTGATCGAAGACTTAGTCGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGCCATTTGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCTCCATCATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGAATCCTCGCTTATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAAATGATGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTTTAAATACCGGAAAAATGAAGCTTCGACAGAGGGTGGTTCATTATCAAGGCCTGCCTCATTTAAGGACAAGCAAGACGGGAAGAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCGTTTAAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGAC CGGTGTATGAACTAATTCTAACCACTCTTGAATGAAATGGATGTTGCAAGATTCT               ]
[-] EMBL CB628606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTAAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACCGTTTAGACGCGGTGTATGAACTAATTCTAACCACTCTTGAATGAAATGGATGTTGC                       ]
[+] EMBL CA998146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA998148             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGCATATGTTATTCTTCACGCACTCATTAAATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGAGATGGTTCTGAAATAACATCTGATAACATGCCTAAGAACACAATCTTTGATTGGCTCTTTGATCCTCTGATGGGCATCAAACAGCAAATAAAAGCCCATAATTTTACATAATAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCACTGATCCCAAGCGCCTCATAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGA                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA998145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGATATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCTAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGAC CGGTGTATGAACTAATTCTAA                                                 ]
[-] EMBL CF306005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGTTCTGAAATAACATCTGATAACAGGCCTAAGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGAC CGGTGTATGAACTAATTCTAACCACTCTTGAATGAAATGGATGTTGCAAGATTCTGTGTTTTGGAAAAAA]




>consensus_10684#0
ACATCATCCCTTCCTTCCCTCCCCTTCCCTGCCAAACTCCCAGCTTCGCGCTGCCTCGCT
GCCGCTGCCGCTGCCGCCGCCGCCGCGACCCCCACTTCTCCGCCAGCAAAGCGAGCTGCT
CTGCTCCGGTTGCCTTCCTCCCTAAGCCTGCTCTGCTCGCGGGCACCAGATTCGGCGGGC
AGCGAAGCAGACAGCTCTCTCCGCCCCTGCCTTTTCTGTTTCTTGATTAGTATAATATCA
ATTAGGAGGCTTTTCTTTGCTTTCGATGGGTGTGTGCGTGCGTGTTGGTAATTTTGATTA
GTTAGCGGCCCATCCTAGCCACGCGACGCCGATCTCCAGGGCGCGGCTGTTCTTGCCAAA
CCGCAACCACCACTAGCCCCCACTTCGTCCGGTTTTAATTTTCAATTATCTTGGCAGTTC
GTGAGCCTTTCGTTTTCTTGGGGCTCCAGGGTTTCGCGTCTCTCTCTGGTTTGGACTTTG
AGACTTGACGACGCTCTGGTGAGCGGGTTGATCGGCGTTGAGGAAGAGATTGGGCGGAAG
GTTGTCGATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCT
GCCTTTCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGCTTTGCTCTTCCCATG
GGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGCA
TGTGATCTGGACATACTACTGCATCATCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCT
GCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGG
AAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGC
AGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGATGGAACATGGAGTAC
TATAACAGGAAGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCATATTT
TTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAATAAG
AGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATGGAAT
AATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGAAGCG
GCTGATCGAAGACTTAGTCGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGCCATT
TGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCTCCAT
CATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGAATCCTCGCT
TATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAAATGA
TGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTTTAAATACCGGAAAAATGAAGC
TTCGACAGAGGGTGGTTCATTATCAAGGCCTGCCTCATTTAAGGACAAGCAAGACGGGAA
GAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCGTTTAA
GTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTGAAGG
AGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAGTACT
TAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAGCTAA
TTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTAAGAA
CACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAGCCCA
GAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTGATCC
GAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAACAAGC
TGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGTACCC
AACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGAGGAC
AATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCATCAG
CCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATCGGGA
GGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTCGTCG
TCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGACCGGTGTATGA
ACTAATTCTAACCACTCTTGAATGAAATGGATGTTGCAAGATTCTGTGTTTTGGAAAAAA

consensusID : consensus_10684#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 806
fasta sequence

                              [TTAAAGTTTTTTGGATTTTAGCCTCTCTTTTTTTTTTTTGTTCTGGTTCAGCTGGAGTTCGTCACTTGCACTTCATTTAGACTGATTGCAACTGTCCATTGCAAAAGGGGAATTGAAGCGGTACTAGGTATCTGTAAATTCCAGAATGCAAAATCGTTGTACGAACTTAAATGCCTTTTCAGCATATGATCAAATACTACTTAGTAATTTTTGCCGTCCCATGTTCCCATTTTTGAACCTCAGATTCTGACTTGCAATTCCTCCCTACGTGTTAATTTTGCCTATGCAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGCATGTGATCTGGACATACTACTGCATCATCAGGTTTAGGATTCACAACTCAGTACAGATCCGTTCCAAAGAGAATTACCACATAATTATGAAAACTGTACTTATATATGCTTGTCATCTTTTTTTCGGAAAGCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTCTTGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAGAAGAAAGACCACTATACCACTGTTTTGTGGTACATTTTCCTTTTCGTTGATTTACTCTGGCATTTTCCTTGTTCTTACTTCTAAAGATTTATTCCTTCGAAAAAATAACTTCTCAAGTTCTACATCGGTATATGCAACTTG]

[-] EMBL AK108372             [TTAAAGTTTTTTGGATTTTAGCCTCTCTTTTTTTTTTTTGTTCTGGTTCAGCTGGAGTTCGTCACTTGCACTTCATTTAGACTGATTGCAACTGTCCATTGCAAAAGGGGAATTGAAGCGGTACTAGGTATCTGTAAATTCCAGAATGCAAAATCGTTGTACGAACTTAAATGCCTTTTCAGCATATGATCAAATACTACTTAGTAATTTTTGCCGTCCCATGTTCCCATTTTTGAACCTCAGATTCTGACTTGCAATTCCTCCCTACGTGTTAATTTTGCCTATGCAGGTGCTTTGCTCTTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGCATGTGATCTGGACATACTACTGCATCATCAGGTTTAGGATTCACAACTCAGTACAGATCCGTTCCAAAGAGAATTACCACATAATTATGAAAACTGTACTTATATATGCTTGTCATCTTTTTTTCGGAAAGCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCTTCTTGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGAAGGAGAAGAAAGACCACTATACCACTGTTTTGTGGTACATTTTCCTTTTCGTTGATTTACTCTGGCATTTTCCTTGTTCTTACTTCTAAAGATTTATTCCTTCGAAAAAATAACTTCTCAAGTTCTACATCGGTATATGCAACTTG]




>consensus_10684#1
TTAAAGTTTTTTGGATTTTAGCCTCTCTTTTTTTTTTTTGTTCTGGTTCAGCTGGAGTTC
GTCACTTGCACTTCATTTAGACTGATTGCAACTGTCCATTGCAAAAGGGGAATTGAAGCG
GTACTAGGTATCTGTAAATTCCAGAATGCAAAATCGTTGTACGAACTTAAATGCCTTTTC
AGCATATGATCAAATACTACTTAGTAATTTTTGCCGTCCCATGTTCCCATTTTTGAACCT
CAGATTCTGACTTGCAATTCCTCCCTACGTGTTAATTTTGCCTATGCAGGTGCTTTGCTC
TTCCCATGGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGG
CCTATGCATGTGATCTGGACATACTACTGCATCATCAGGTTTAGGATTCACAACTCAGTA
CAGATCCGTTCCAAAGAGAATTACCACATAATTATGAAAACTGTACTTATATATGCTTGT
CATCTTTTTTTCGGAAAGCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGCTGCTTCTTCT
TCTTGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGGGAAGTGTCCT
AATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATGCAGTTGGAGA
AGGAGAAGAAAGACCACTATACCACTGTTTTGTGGTACATTTTCCTTTTCGTTGATTTAC
TCTGGCATTTTCCTTGTTCTTACTTCTAAAGATTTATTCCTTCGAAAAAATAACTTCTCA
AGTTCTACATCGGTATATGCAACTTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10684#0      ACATCATCCCTTCCTTCCCTCCCCTTCCCTGCCAAACTCCCAGCTTCGCGCTGCCTCGCT 60
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GCCGCTGCCGCTGCCGCCGCCGCCGCGACCCCCACTTCTCCGCCAGCAAAGCGAGCTGCT 120
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CTGCTCCGGTTGCCTTCCTCCCTAAGCCTGCTCTGCTCGCGGGCACCAGATTCGGCGGGC 180
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AGCGAAGCAGACAGCTCTCTCCGCCCCTGCCTTTTCTGTTTCTTGATTAGTATAATATCA 240
consensus_10684#1      ---------TTAAAGTTTTTTGGATTTTAGCCTCTCTTTTTTTTTTTTGTTCTGGT-TCA 50
                                   *  * * *  *    *  * * *** *** **  **  * *  * ***

consensus_10684#0      ATTAGGAGGCTTTTCTTTGCTTTCGATGGGTGTGTGCGTGCGTGTTGGTAATTTTGATTA 300
consensus_10684#1      GCTGGAGTTCGTCACTTGCACTTCATTTAGACTGATTGCAACTGTCCATTGCAAAAGGGG 110
                         * *    * *  ***    ***  *  *  **   *    ***   *           

consensus_10684#0      GTTAGCGGCCCATCCTAGCCACGCGACGCCGATCTCCAGGGCGCGGCTGTTCTTGCCAAA 360
consensus_10684#1      AATTGAAGCG-GTACTAGGTATCTG----TAAATTCCAGAATGCAAA-ATCGTTGTACGA 164
                         * *  **   * ****  *   *      *  *****   **     *  ***    *

consensus_10684#0      CCGCAACCACCACTAGCCCCCACTTCGTCCGGTTTTAATTTTCAATTATCTTGGCAGTTC 420
consensus_10684#1      ACTTAAATGCCTTT--TCAGCATATGATCAAATACTACTTAGTAATT--TTTGCCGTCCC 220
                        *  **   **  *   *  **  *  **   *  ** **   ****   *** *    *

consensus_10684#0      GTGAGCCTTTCGTTTTCTTGGGGCTCCAGGGTTTCGCGTCTCTCTCTGGTTTGGACTTTG 480
consensus_10684#1      ATGTTCCCATTTTTGAACCTCAGATTCTGACTTGCAATTCCTCCCTACGTGTTAATTTTG 280
                        **  **  *  **        * * * *  ** *   **   *    ** *  * ****

consensus_10684#0      AGACTTGACGACGCTCTGGTGAGCGGGTTGATCGGCGTTGAGGAAGAGATTGGGCGGAAG 540
consensus_10684#1      CC-TATGCAGGTGCTTTGCTCTTC----CCATGGGCATGGCTTATCATGATGATCGGAA- 334
                            **  *  *** ** *   *      ** *** * *   *  *   **  ***** 

consensus_10684#0      GTTGTCGATGGAGCCGCCGTCTGGGATTCGGGCATCTGCCTGGAGCTTCTTCAAGTTCCT 600
consensus_10684#1      ----TCTCTGCACTCGT--TCTTGGCTTATGGCCTATGCATGTGATCTGGACATACTACT 388
                           **  ** *  **   *** ** **  *** * *** **     *   **   * **

consensus_10684#0      GCCTT-TCTTCCTTGGCCTTCTCCTCCTGGGGATCATCAAAGGTGCTTTGCTCTTCCCAT 659
consensus_10684#1      GCATCATCAGGTTTAGGATTCACAAC-------TCAGTACAGAT------CCGTTCCAAA 435
                       ** *  **    ** *  *** *  *       ***  * ** *      *  **** * 

consensus_10684#0      GGGCATGGCTTATCATGATGATCGGAATCTCTGCACTCGTTCTTGGCTTATGGCCTATGC 719
consensus_10684#1      GAGAATTACCA--CATAATTATGAAAA---CTGTACTTATA--------------TATGC 476
                       * * **  *    *** ** **   **   *** ***  *               *****

consensus_10684#0      ATGTGATCTGGACATACTACTGCATCATCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGC 779
consensus_10684#1      TTGTCATCTT----TTTTTCGGAA--AGCAGATCCAAGCTTGTCGGGCCTGTTGTAAAGC 530
                        *** ****     *  * * * *  * ********************************

consensus_10684#0      TGCTTCTTCTTGTCGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGG 839
consensus_10684#1      TGCTTCTTCTTCTTGCCGCATCTGTGATTTTAGTCTTATGGCTCATTGTCGGGATCGTGG 590
                       *********** * **********************************************

consensus_10684#0      GAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATG 899
consensus_10684#1      GAAGTGTCCTAATTGGTGTGGTGTATGGTTTTCTCGCTCCAGTAATGGCCACATTTGATG 650
                       ************************************************************

consensus_10684#0      CAGTTGGAGAAGGAAAAGAAAGACCACTATACCACTGTTTTGTGGATGGAACATGGAGTA 959
consensus_10684#1      CAGTTGGAGAAGGAGAAGAAAGACCACTATACCACTGTTTTGTGG-TACATTTTCCTTTT 709
                       ************** ****************************** *  *   *    * 

consensus_10684#0      CTATAACAGGA---AGCTGTACAGTAGTTAGGGACCTGAAAGATTTATTATTGCATTCAT 1016
consensus_10684#1      CGTTGATTTACTCTGGCATTTTCCTTGTTCTTACTTCTAAAGATTTATTCCTTCGAAAAA 769
                       *  * *         **  *    * ***         ***********  * *    * 

consensus_10684#0      ATTTTTCAATAATGGATGACCTTCGTTTTCATGCACCTCCTGGAGGAGAGCCATATGAAA 1076
consensus_10684#1      ATAACTTCTCAA-----GTTCTACATCGGTATATGCAACTTG------------------ 806
                       **   *    **     *  ** * *    **   *  * **                  

consensus_10684#0      TAAGAGTGCTTGACATTCCTGGTGCATTATTCGCTGCTGCGTGTGGATTTCTAGTGGATG 1136
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GAATAATGTTCACACTAATTGCCTTCTACAAGTTCCCTGTGATGCTTTTCAAAGGATGGA 1196
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AGCGGCTGATCGAAGACTTAGTCGGCAGGGAAGGACCTTTCCTGGAGACAGCTTGTGTGC 1256
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CATTTGCTGGTCTTGCTATTCTTCTGTGGCCATTTGCTGTTTTTGGAGCTTTTCTAGCCT 1316
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CCATCATCTCCAGTATTCCTTTAGGTGCTTTTGCTGCTGTTGTGGTTTATCAGGAATCCT 1376
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CGCTTATCATGGGACTAAATTATGTAATATCATCAGTGGCCATCTTTGATGAATATACAA 1436
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      ATGATGTGCTTGACATGGCACCAGGATCCTGCTTTCCCAGGTTTAAATACCGGAAAAATG 1496
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AAGCTTCGACAGAGGGTGGTTCATTATCAAGGCCTGCCTCATTTAAGGACAAGCAAGACG 1556
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GGAAGAAAGCTCCATCACGTGTTACATCGTTTAAGGGCAGCTTTGATGAGTTCAATCCGT 1616
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      TTAAGTTGCTAGATCACCTGTTTGAGGAGTGTAAGCACCGTGGAGAGGTTCTGGTTGCTG 1676
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AAGGAGTGATAACACCAAAAGACATTGAAGAAACAAAGTCAGGAAAAATCGGGATTGGAG 1736
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      TACTTAATGTTGGTTTGCCGGCATATGTTATTCTTCACGCACTCATTAGATCTGCAAAAG 1796
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CTAATTCTGATGGCCTAATTTTAAGTGATGGTTCTGAAATAACATCTGATAACAGGCCTA 1856
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AGAACACAATCTTTGATTGGTTCTTTGATCCTCTGATGGTCATCAAAGAGCAAATAAAAG 1916
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      CCCAGAATTTTACAGAAGAGGAAGAAGCATACCTCAAGAAGCGAGTGCTGCTGACCAGTG 1976
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      ATCCGAAGCGCCTCAAAGAGGTTGTTCCTCATCTGCCATCATCACTGAATGAGCGAAAAC 2036
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AAGCTGAAATCGACGCACTTTCCCGGAGATTGCAAGGAATCACAAGGTCGATATCAAGGT 2096
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      ACCCAACGGCCAAGCGTCGTTTCGACGACCTTGTCAGATCACTCTCGGAAGAGCTCGAGA 2156
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GGACAATGGGTGGCAGCCAATCTGGCAGTGTGTCCCAGATGCAGAAACTGAGAAGCGGCA 2216
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      TCAGCCGAATGCTCAGCCAGAGATCCATGGGGAAGAGGACGAGCAACCGTGGTGATGATC 2276
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GGGAGGCGCAGTTGACAATTGATCCCTAACATCTCCAGAAAGTTCAGACAGAATTTCTTC 2336
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      GTCGTCTTTCTAGAGCTACTTTAGCTGTCTTGATTTGTACAGAACTGTTTAGACCGGTGT 2396
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      ATGAACTAATTCTAACCACTCTTGAATGAAATGGATGTTGCAAGATTCTGTGTTTTGGAA 2456
consensus_10684#1      ------------------------------------------------------------
                                                                                   

consensus_10684#0      AAAA 2460
consensus_10684#1      ----