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Oryza sativa
cluster # 10720 cluster # 10720       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10720#0 length = 880 sequences # 8  

consensusID : consensus_10720#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 880
fasta sequence
                              [CAGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG-CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA-CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT]

[+] EMBL AK066855             [CAGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT]
[+] EMBL AK104950             [ AGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT]
[+] EMBL AU082714             [           AACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCA NTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCNGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU184536             [                  ATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU184453             [                  ATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGGCCGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCNTCNAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA756079             [                      TCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCNAGA                                                                                                                                                                                                                                                                            ]
[+] EMBL OSR03171A            [                              CCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCA NTGGACGNGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTNAGGATGCACTTCCACGNCTGATTCGTCAGGGGTTGCGACGGCTCNNTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGNANCGNGACGTCGAACCANACGCTGCNCGGGTTCGGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSPEROX              [                              CCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCCGCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGTTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT]


>consensus_10720#0 CAGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCT AGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGC TCGCGGCGGCGGCGGTGATGGCGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATT CGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGC CCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCG ACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGACGCGACGCCGA ACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCAT GCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGC TGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCG CCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGT TCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCG GGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACG CCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCA CGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCG ACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)