These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10720#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 880 fasta sequence [CAGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG-CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA-CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT] [+] EMBL AK066855 [CAGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT] [+] EMBL AK104950 [ AGCTACCAGCAACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT] [+] EMBL AU082714 [ AACAAGCATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCA NTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCNGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACT ] [+] EMBL AU184536 [ ATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGT ] [+] EMBL AU184453 [ ATTCTCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGGCCGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCNTCNAGAGG ] [+] EMBL CA756079 [ TCTTCTAGCCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGCTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCNAGA ] [+] EMBL OSR03171A [ CCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCA NTGGACGNGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCGCCGCGCCCAGCCTCGCCGGCCCGCTCCTNAGGATGCACTTCCACGNCTGATTCGTCAGGGGTTGCGACGGCTCNNTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGNANCGNGACGTCGAACCANACGCTGCNCGGGTTCGGCTTC ] [+] EMBL OSPEROX [ CCTTAGCCTAGCTAGCTAGCTTTGTTGTCTAGCTCTGATCGAGGTTGGTGGTGATCATGGCGTCGTCGAGGGTGATCCTAGCGCTGCTGCTCGCGGCGGCGGCGGTGATGG CGTCGTCGGCGCAGCTGGACGAGAAGTTCTACAGCAATTCGTGCCCCAGCGTGGAGGCCGTCGTCCGGAAGGAGATGGTGCGCGCGCTCGGCCGCGCGCCCAGCCTCGCCGGCCCGCTCCTCAGGATGCACTTCCACGACTGTTTCGTCAGGGGTTGCGACGGCTCGGTGCTGCTCGACTCGGCCGGGAACAGCACGGCGGAGAAGGA CGCGACGCCGAACCAGACGCTGCGCGGGTTCGGCTTCGTCGAGAGGGTGAAGGCCGCCGTGGAGAAGGCATGCCCGGGCACCGTCTCCTGCGCCGACGTGCTCGCGCTCATGGCCAGGGACGCCGTGTGGCTGAGCAAGGGCCCGTTCTGGGCGGTGCCTCTCGGCCGCCGCGACGGCAGGGTGTCCATCGCCAACGAGACCGACCAGCTGCCGCCTCCCACCGCCAACTTCACCGAGCTCACCCAGATGTTCGCCGCCAAGAACCTCGACCTCAAGGACCTCGTCGTCCTCTCCGCTGGGCACACGATCGGGACGTCGCACTGCTTCTCCTTCACTGACAGGCTGTACAACTTCACCGGCCTGGACAACGCCCACGACATCGACCCGACGCTGGAGCTGCAGTACATGGCGAGGCTGAGGAGCAAGTGCACGAGCCTCCAAGACAACACGACGCTGGTGGAGATGGACCCGGGGAGCTTCAAGACGTTCGACCTGGGGTACTTCAAGAACGTGGCCAAGCGGCGGGGGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||