|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10739#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1300 fasta sequence
[CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCACGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTACATTCAGTTACTATGCCTTCAAAAGCAGAAATTCATTTTTCTAGATGATGAACATCTTAGTGTACTTGTAGAAGTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCT-CAGCTGTGTAACAGCAACTCTAACTGAATGGTGGT-GATATCTGCAATATCTTGTTGTCTGCACCACGAGCC-ATAC-AAATTCAGCTGAATTTTCGAGTCAA-CCTTGTACTGAACCAAACAA-A-ACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGAAAAATTCACCTACAGCAACGGGTGGGGCCATGGTGCACATTGAACACATACACAGCGGAGAGATAATGTCCACAACTTTTATAAGGTTTTTCTACTGTAACGCACACTGCTGCGTTCTTCTGTAGAATTTCCACTGCAAAAGATGTGTNNGCGCGCGTCTTCTGTTTCAGTAAACGCGACATCGTCCGTGGCAGCGTGCATGACCGTGGGACAAAGCACGTCGCCGTTGCAGTTTTGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTAAAAA]
[+] EMBL AK068619 [CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCACGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTACATTCAGTTACTATGCCTTCAAAAGCAGAAATTCATTTTTCTAGATGATGAACATCTTAGTGTACTTGTAGAAGTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCT CAGCTGTGTAACAGCAACTCTAACTGAATGGTGGT GATATCTGCAATATCTTGTTGTCTGCACCACGAGCC ATAC AAATTCAGCTGAATTTTCGAGTCAA CCTTGTACTGAACCAAACAA A ACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGAA ]
[+] EMBL OSS16325A [ ACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCT CAGCTGTGTAACANANACTCTAACTGAATGGTGGT GATATCTGCAATATCTTGTTGTCTGCACCACGAGCC ATAC AAATTCAGCTGAATTTTCGAGTCAA CCTTGTACTGAACCAAACAA A ACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGNAAAATTCACCTACAGCAACGGGTGGGGCCATG ]
[+] EMBL AU162147 [ AGTTGAGTCGAGCTNCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTNGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCNATACGAAATTCAGCTGAATTTTCGAGTCAANCCTTGTACTGAACCAAACAANANACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGAAAAATTCACCTACAGCAAC GGTCGCGCCATGGTGCACATTGAACACATACACAGCGGAGAGATAATGTCCACAACTTTTATAAGGTTTTTCTACTGTAACGCACACTGCTGCGTTCTTCTGTAGAATTTCCACTGCAAAAGATGTGTNNGCGCGCGTCTTCTGTTTCAGTAAACGCGACATCGTCCGTGGCAGCGTGCATGACCGTGGGACAAAGCACGTCGCCGTTGCAGTTTTGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTAAAAA]
consensusID : consensus_10739#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 980 fasta sequence
[CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGA-TCTCC-AAGC-TTTATG-CGACAAGGTGGGATGG-CCAC-GCAGACCCCTAACCAAAATAGCAGCAT-CCTTAAGAAACAGTTACCTGGTT-GCTACAC-TACATTCAGTTACTATGCCTTCAAAAG-CAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCATACAAATTCAGCTGAATTTTCGAGTCAACCTTGTACTGAACCAAACAAAACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGAAAAAAAAA]
[+] EMBL AK059369 [CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGA TCTCC AAGC TTTATG CGACAAGGTGGGATGG CCAC GCAGACCCCTAACCAAAATAGCAGCAT CCTTAAGAAACAGTTACCTGGTT GCTACAC TACATTCAGTTACTATGCCTTCAAAAG CAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCATACAAATTCAGCTGAATTTTCGAGTCAACCTTGTACTGAACCAAACAAAACACTTCTTATTGTCACTAGCAAAACTGCA ]
[+] EMBL AU162775 [CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGA TCTCC AAGC TTTATG CGACAAGGTGGGATGG CCAC GCAGACCCCTAACCAAAATAGCAGCAT CCTTAAGAAACAGTTACCTGGTT GCTACAC TACATTCAGTTACTATGCCTTCAAAAG CAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAG AACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAANGTCTTGGTAAAGCGTTAATGGA ]
[+] EMBL AU057725 [ ATTTTCTTCAGCTGGAGATGTTAATGTGTATGANTCTCCAAAGCTTTTATGCCGACAAGGTGGGATGGCCCACGGCAGACCCCTAACCAAAATAGCAGCATCCCTTAAGAAACAGTTACCTGGTTGGCTACACTTACATTCAGTTACTATGCCTTCAAAAGCCAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCATACAAATTCAGCTGAATTTTCGAGTCAACCTTGTACTGAACCAAACAAAACACTTCTTATTGTCACTAGCAAAACTGCAAAGATCCCTGAAAAAAAAA]
consensusID : consensus_10739#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 889 fasta sequence
[CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCACGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTACATTCAGTTACTATGCCTTCAAAAGCAGAAGTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCACCA]
[+] EMBL AK104449 [CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCCCCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACTTGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAACAGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAGGAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCTTCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCACGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTACATTCAGTTACTATGCCTTCAAAAGCAGAAGTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCACCA]
consensusID : consensus_10739#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[CATTCAGTTACTATGCCTTCAAAAGCAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCANNANGNNNCATACAAATTCAGCTNANNNNNNNNNTCNNNNAAAANNNNAAAAA]
[+] EMBL CF195907 [CATTCAGTTACTATGCCTTCAAAAGCAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCGCGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCATATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAGAGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAACTTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAGTGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGACCATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTGGTGATATCTGCAATATCTTGTTGTCTGCANNANGNNNCATACAAATTCAGCTNANNNNNNNNNTCNNNNAAAANNNNAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10739#0 CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCC 60
consensus_10739#2 CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCC 60
consensus_10739#1 CCGTCCTCTTTCAGATGCGTCCCCACGGCGTCGTGCGGTTTGGGGGCCCGGGGTAAAGCC 60
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 CCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACT 120
consensus_10739#2 CCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACT 120
consensus_10739#1 CCCGCGCCGCGCCGGCTTCTCCACGACCACGCGCAAGGTAAAAAACGGGCTGCGGCAACT 120
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 TGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAAC 180
consensus_10739#2 TGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAAC 180
consensus_10739#1 TGGTCCTTGAAGGCTGGTCTGTGGGACTCCCTTAGATCCGGATTTTTGAAGAGTAATAAC 180
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 AGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAG 240
consensus_10739#2 AGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAG 240
consensus_10739#1 AGTACAGAGACAGTAGAGCCACCATCAGCACCAATTGAAGAGGAAGAACCTTTGCCCGAG 240
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 GAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCT 300
consensus_10739#2 GAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCT 300
consensus_10739#1 GAACTAGTACTCCTAGAAAGGACACTTGCTGATGGCAGCACAGAGCAGATCATATTTTCT 300
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 TCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCA 360
consensus_10739#2 TCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCA 360
consensus_10739#1 TCAGCTGGAGATGTTAATGTGTATGATCTCCAAGCTTTATGCGACAAGGTGGGATGGCCA 360
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 CGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTA 420
consensus_10739#2 CGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTA 420
consensus_10739#1 CGCAGACCCCTAACCAAAATAGCAGCATCCTTAAGAAACAGTTACCTGGTTGCTACACTA 420
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 CATTCAGTTACTATGCCTTCAAAAGCAGAAATTCATTTTTCTAGATGATGAACATCTTAG 480
consensus_10739#2 CATTCAGTTACTATGCCTTCAAAAGCAGAA------------------------------ 450
consensus_10739#1 CATTCAGTTACTATGCCTTCAAAAGCAGA------------------------------- 449
consensus_10739#3 CATTCAGTTACTATGCCTTCAAAAGCAGA------------------------------- 29
*****************************
consensus_10739#0 TGTACTTGTAGAAGTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCG 540
consensus_10739#2 -------------GTTATTTGACAGAGGGAGAAGAGAGGAAGCAACTAATTGGTATGGCG 497
consensus_10739#1 --------------------------GGGAGAAGAGAGGAAGCAACTAATTGGTATGGCG 483
consensus_10739#3 --------------------------GGGAGAAGAGAGGAAGCAACTAATTGGTATGGCG 63
**********************************
consensus_10739#0 CGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCA 600
consensus_10739#2 CGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCA 557
consensus_10739#1 CGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCA 543
consensus_10739#3 CGAGCAACTTCAGACCATGCCTTTAATGCTACCATTTGGGATGTTCTCGTTGACCCTTCA 123
************************************************************
consensus_10739#0 TATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAG 660
consensus_10739#2 TATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAG 617
consensus_10739#1 TATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAG 603
consensus_10739#3 TATCAGGGTCAAGGTCTTGGTAAAGCGTTAATGGAGAAAGTAATCCGAACTTTGCTCCAG 183
************************************************************
consensus_10739#0 AGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAAC 720
consensus_10739#2 AGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAAC 677
consensus_10739#1 AGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAAC 663
consensus_10739#3 AGAGACATCAGCAATATTACGCTGTTTGCAGATAACAAAGTTGTAGATTTCTACAAGAAC 243
************************************************************
consensus_10739#0 TTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAG 780
consensus_10739#2 TTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAG 737
consensus_10739#1 TTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAG 723
consensus_10739#3 TTGGGATTCGAAGCTGACCCTCAAGGCATCAAGGGCATGTTCTGGTACCCCAGATTTTAG 303
************************************************************
consensus_10739#0 TGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGAC 840
consensus_10739#2 TGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGAC 797
consensus_10739#1 TGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGAC 783
consensus_10739#3 TGCCAGCGGCCTGACACCTTCCTGTTCATCAGTAATGCCTGGTTCTCACCGCCCAGGGAC 363
************************************************************
consensus_10739#0 CATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTG 900
consensus_10739#2 CATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTG 857
consensus_10739#1 CATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTG 843
consensus_10739#3 CATAGTTTTGTCCAGTTGAGTCGAGCTCAGCTGTGTAACAGCAACTCTAACTGAATGGTG 423
************************************************************
consensus_10739#0 GTGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCATACAAATTCAGCTGAATTTTC 960
consensus_10739#2 GTGATATCTGCAATATCTTGTTGTCTGCACCA---------------------------- 889
consensus_10739#1 GTGATATCTGCAATATCTTGTTGTCTGCACCACGAGCCATACAAATTCAGCTGAATTTTC 903
consensus_10739#3 GTGATATCTGCAATATCTTGTTGTCTGCANNANGNNNCATACAAATTCAGCTNANNNNNN 483
***************************** *
consensus_10739#0 GAGTCAACCTTGTACTGAACCAAACAAAACACTTCTTATTGTCACTAGCAAAACTGCAAA 1020
consensus_10739#2 ------------------------------------------------------------
consensus_10739#1 GAGTCAACCTTGTACTGAACCAAACAAAACACTTCTTATTGTCACTAGCAAAACTGCAAA 963
consensus_10739#3 NNNTCNNNNAAAANNNNAAAAA-------------------------------------- 505
consensus_10739#0 GATCCCTGAAAAATTCACCTACAGCAACGGGTGGGGCCATGGTGCACATTGAACACATAC 1080
consensus_10739#2 ------------------------------------------------------------
consensus_10739#1 GATCCCTGAAAAAAAAA------------------------------------------- 980
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 ACAGCGGAGAGATAATGTCCACAACTTTTATAAGGTTTTTCTACTGTAACGCACACTGCT 1140
consensus_10739#2 ------------------------------------------------------------
consensus_10739#1 ------------------------------------------------------------
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 GCGTTCTTCTGTAGAATTTCCACTGCAAAAGATGTGTNNGCGCGCGTCTTCTGTTTCAGT 1200
consensus_10739#2 ------------------------------------------------------------
consensus_10739#1 ------------------------------------------------------------
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 AAACGCGACATCGTCCGTGGCAGCGTGCATGACCGTGGGACAAAGCACGTCGCCGTTGCA 1260
consensus_10739#2 ------------------------------------------------------------
consensus_10739#1 ------------------------------------------------------------
consensus_10739#3 ------------------------------------------------------------
consensus_10739#0 GTTTTGTTTTTGTTTGTTTGTTTTTGTTTTTGTTTAAAAA 1300
consensus_10739#2 ----------------------------------------
consensus_10739#1 ----------------------------------------
consensus_10739#3 ----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||