cluster # 10752

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Oryza sativa
cluster # 10752 cluster # 10752 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10752#0 length = 1074 sequences # 8
consensusID : consensus_10752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1074
fasta sequence
                              [CCCGTGTCCTCCTCCCACCTCGCTCCCCCGTAAAACCCGAAATTACAATCAGGTCCTCGGCGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGGAATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGCCCAAGGACAGCGTGGTGGCGTACCTGCTGTACAACACGGCGGTGTCGATCGCCATCCTGGCGGACATGGTGCGGGCGGCGCTGGTGTTCCTCGGCCTCCCCGTGCCGCCCTCGGCGTGGGAGGACGGCGACGACCAGCTGGCGGCGATCGCGGCGGCCGCCGCGGCCGCGGCCGCGGCGGCGGGGGGCCCGAGCCTGGCGGACAGGTTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGCGGCGGCGAGGCGGGGGCGCGGGCGCGGCCGACTGCCGCGTCTGCCTCGCGCGGTTCGAGCCGGAGTCGGTGGTGAACCGCCTCCCCTGCGGCCACCTCTTCCACCGCGCCTGCCTCGAGAAGTGGCTCGACTACGACCACGCCACCTGCCCGCTCTGCCGCCACCGCCTCCTCCCCGCCACCACCGAGTCCCCCTCGCCGTCGCCGGCGACGGCGACCCCCCATTTCGCCCGGATTTAGAGAGATCTCCCCCCTTCAATCCGCCACTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATCATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCATTGTAAATATTTGCAGAGTGCTCCGATCGATGGAGAGGTGTAGCA-CTTGTGTACAGGGCTTTTGGAAAGCGAAGAGATGAGAAGGAGAGAAAAAAAAATCATTGCCCAAAAAAAAAAAAAAAAAAAAATAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAGAAAAAAAAAAAAACCCTCGA]

[+] EMBL AK065316             [CCCGTGTCCTCCTCCCACCTCGCTCCCCCGTAAAACCCGAAATTACAATCAGGTCCTCGGCGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGGAATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGCCCAAGGACAGCGTGGTGGCGTACCTGCTGTACAACACGGCGGTGTCGATCGCCATCCTGGCGGACATGGTGCGGGCGGCGCTGGTGTTCCTCGGCCTCCCCGTGCCGCCCTCGGCGTGGGAGGACGGCGACGACCAGCTGGCGGCGATCGCGGCGGCCGCCGCGGCCGCGGCCGCGGCGGCGGGGGGCCCGAGCCTGGCGGACAGGTTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGCGGCGGCGAGGCGGGGGCGCGGGCGCGGCCGACTGCCGCGTCTGCCTCGCGCGGTTCGAGCCGGAGTCGGTGGTGAACCGCCTCCCCTGCGGCCACCTCTTCCACCGCGCCTGCCTCGAGAAGTGGCTCGACTACGACCACGCCACCTGCCCGCTCTGCCGCCACCGCCTCCTCCCCGCCACCACCGAGTCCCCCTCGCCGTCGCCGGCGACGGCGACCCCCCATTTCGCCCGGATTTAGAGAGATCTCCCCCCTTCAATCCGCCACTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATCATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCATTGTAAATATTTGCAGAGTGCTCCGATCGATGGAGAGGTGTAGCA CTTGTGTACAGGGCTTTTGGAAAGCGAAGAGATGAGAAGGAGAGAAAAAAAA                                                                                                     ]
[+] EMBL CB678948             [                       TCCCCCGTAAAACCCGAAATTACAATCAGGTCCTCGGCGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGGAATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGCCCAAGGACAGCGTGGTGGCGTACCTGCTGTACAACACGGCGGTGTCGATCGCCATCCTGGCGGACATGGTGCGGGCGGCGCTGGTGTTCCTCGGCCTCCCCGTGCCGCCCTCGGCGTGGGAGGACGGCGACGACCAGCTGGCGGCGATCGCGGCGGCCGCCGCGGCCGCGGCCGCGGCGGCGGGGGGCCCGAGCCTGGCGGACAGGTTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGCGGCGGCGAGGCGGGGGCGCGGGCGCGGCCTACTGCCGCGTCTGCCTCACGCGGTTCGAGCCGGAATCGGTGGTGAACCGCATCCCCTGCGGCCACCTCTTCCACCGCAACTGCCTCAAGAAGTGGCTCGACTACGACCACGCCACCTGCCCGCTCTGCCGCCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB684554             [                               AAAACCCTAAATTACAATCAGGTCCTCGGCGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGGAATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGCCCAAGGACAGCGTGGTGGCGTACCTGCTGTACAACACGGCGGTGTCGATCGCCATCCTGGCGGACATGGTGCGGGCGGCGCTGGTGTTCCTCGGCCTCCCCGTGCCGCCCTCGGCGTGGGAGGACGGCGACGACCAGCTGGCGGCGATCGCGGCGGCCGCCGCGGCCGCGGCCGCGGCGGCGGGGGGCCCGAGCCTGGCGGACAGGTTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BE230073             [                                        AATTACAATCAGGTCCTCGGCGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGGAATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGCCCAAGGACAGCGTGGTGGCGTACCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB684555             [                                                                                                                                                                                                                                                                                                                                                                                                  TTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGCGGCGGCGAGGCGGGGGCGCGGGCGCGGCCGACTGCCGCGTTTGCCTCGCGCGGTTCGAACCGGAGTCGGTGGTGAACCGCCTCCCCTGCGGCCACCTCTTCCACCGCGCCTGCCTCGAGAAGTGGCTCGATTACGACCACGCCACCTGCCCGTTCTGCCGCCACCGCCTCCTCCCCGCCACCACCGAGTCCCCCTCGCCGTCGCCGGCGACGGGGACCCCCCATTTCGCCCGGATTTAGAGAGATCTCCCCCCTTCAATCCGCCATTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATCATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTCGTGTTGGTGCTGTACCATTGTAAATATTTGCAGAGTGCTCCGATCGATG                                                                                                                                                                       ]
[+] EMBL CA758235             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCGACGGCGACCCCCCATTTCGCCCGGATTTAGAGAGATCTCCCCCCTTCAATCCGCCACTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATCATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCATTGTAAATATTTGCAGAGTGCTCCGATCGATGGAGAGGTGTAGCA CTTGTGTACAGGGCTTTTGGAAAGCGAAGAGATGAGAAGGAGAGAAAAAAAAATCATTGCCCAAAAAAAAAAAAAAAAAAAAATAAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAGAAAAAAAAAAAAACCCTCGA]
[+] EMBL AU174856             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCACTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATCATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCATTGTAAATATTTGCAGAGTGCTCCGATCGATGGAGAGGTGTAGCA CTTGTGTACAGGGCTTTTGGAAAGCGAAGAGATGAGAAGGAGAGAAAAAAAAATCATTGCCCAAAAAAAAAAAAAAAAAAAAAaa                                                                    ]
[+] EMBL BI800230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTCCTTTTTCCCCCCACTTTCTTAATTTTTTTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTCTTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCCTTGTAAATATTTGCAGAGTGCTCCGATCGATGGAGAGGTGTAGCACCTTGTGTACCGGGCTTTTGGAAAGCGAAGAGATGAGAAGGAGAGAAAAAAAAATCCTTGCCCCAAAAAAAAAA                                                                                ]




>consensus_10752#0
CCCGTGTCCTCCTCCCACCTCGCTCCCCCGTAAAACCCGAAATTACAATCAGGTCCTCGG
CGGACGCCACCCCCAAATCTGAAACCCTCGCCGCCGCCGCCGCCGCGCGATCCCCCCCGG
AATTCCATCGGATCGGCCCCCGCCTCTCCGGCGAGATGGGCATCTCGAGCATGCCGGCGC
CCAAGGACAGCGTGGTGGCGTACCTGCTGTACAACACGGCGGTGTCGATCGCCATCCTGG
CGGACATGGTGCGGGCGGCGCTGGTGTTCCTCGGCCTCCCCGTGCCGCCCTCGGCGTGGG
AGGACGGCGACGACCAGCTGGCGGCGATCGCGGCGGCCGCCGCGGCCGCGGCCGCGGCGG
CGGGGGGCCCGAGCCTGGCGGACAGGTTCCGGAGCAGGTTCAGGCCGGCGAGGTTCGGGC
GGCGGCGAGGCGGGGGCGCGGGCGCGGCCGACTGCCGCGTCTGCCTCGCGCGGTTCGAGC
CGGAGTCGGTGGTGAACCGCCTCCCCTGCGGCCACCTCTTCCACCGCGCCTGCCTCGAGA
AGTGGCTCGACTACGACCACGCCACCTGCCCGCTCTGCCGCCACCGCCTCCTCCCCGCCA
CCACCGAGTCCCCCTCGCCGTCGCCGGCGACGGCGACCCCCCATTTCGCCCGGATTTAGA
GAGATCTCCCCCCTTCAATCCGCCACTGGGCCGTGTGCGCGTAGGAAAATTGAGAGGATC
ATTTAGCTCTAGTGCTAGCTCCATTTAGTGCTCCTTTTTCCCCCCACTTTCTTAATTTTT
TTTTCACCTCTTTGCAGTGTTTTTTTTTACCATCTTCGAGTGGCCTTTTCTTTTCTTTTC
TTTCTTTTTTTACTTCTTTGTGTTGCTGCTGTACCATTGTAAATATTTGCAGAGTGCTCC
GATCGATGGAGAGGTGTAGCACTTGTGTACAGGGCTTTTGGAAAGCGAAGAGATGAGAAG
GAGAGAAAAAAAAATCATTGCCCAAAAAAAAAAAAAAAAAAAAATAAANAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAGAAAAAAAAAAAAACCCTCGA
clustalw multiple alignements is not computed in this case