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Oryza sativa
cluster # 10785 cluster # 10785       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10785#0 length = 2422 sequences # 5  
consensus_10785#1 length = 977 sequences # 3  

consensusID : consensus_10785#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2422
fasta sequence
                              [GCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGTAACTCCTTTCCTCCTCCTGTTATTCAAGAACTTGGATTCTAGTTCCTTCGCTAGGAAGGAGAAGTACTGAAGTACTTTCTTAGGAAGGATAGAGAAGAGGGGGAGGGGAGTTGGACCTAGCCTGACAATTTTTGGTTTGGTTGTAGACTACTTGTCTATTACAACTATTAAAGAGATAGAAAGAGAATGTAACATGTTACATGTTCACTCTACAGGGCTAGAAATTCTGCTTTAGTTAGAGGAAAAAATGATTTTGGTGGGTTTGGATTATGATAGTGTAGATTGGTTGCATATACACTAGAATTGTTACATTTGGACTATTAGTGTAATTATACTTTTATCAATAGGTATAAAAATTGTATAGCAGATATATTTTCAGAGGGATAGTCTATTAGTTTCACTTGTGTGGGTCAGCAGGACGTTCGGCTAGGTTTTACTATTTACTGCGAGAGAAACATTTTAGGGGGACATTTTGGAGGTTTGGGCATGAAAAGGTCTGTCCTTTTATCAACTTCCATTAATTTATTGTATCTGCTTCAAAAGTTTTATGTTTTCCTGGTTCTAGATACAATTTTCTTTCAGTGCTGTAGTGCAGAACTGCAGACTACAGTTCAACTGTGCAGCACATTCTGAATTAGGCATTGACTATGTACTATGTTACTATGGTTTATTAATTTTGCAGGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAGACCAGGTGTGTGGCTTACATCTACTTATGAGATAACTGCTTAATAGTCAGTAATGTGTTGTGGTGAGATGATTTTAACTAGTTTGTGTAGATATTGCAGCCAATTTAAACAAACACTAGTCTAGGCTGAATTGTTGTTAAAAGCGTTCTTGTGGCTGCATATTTCAAAATTGGGTTCAGCTGCTTGTGTTTTTTTTCTCTGTTTGATTTTAAACTTATATGCCGCTCAAAAGATAATAGTATTGACCATCAAACATGCCTATTGATTATAAGGGCAGTCTCATAGTTATTAGGGTATACTAGGATGGGTTCTGAAGGAGTATGTGTAATATTACTGATTGATCCATCTCCAGAGGCATAACCTGTTTGTTTGCCTGACTCATATTCATATGCTTGGCATCTTGCCATTGTTATTTTGATCTGTAGTCTACTCATGTTTGATCAGTTATGCACTGACTTATAGATAATCATAAGCATTCCTATGTTTGTGATTTCCCTATGACTTGTAACGGAAAATTGGAAACTGAACCTTCCATAGCCATTGCTAACTACCTTCATCTGTTTGTCATGACTCATGAGGCAAACTAGTTTTTGTAGGGCACATTATTATGACATTAGTGATTTATGGCTTCATGGGTAATCATGTTTAGCATATGCTTGGTCTAACCGAAATACTTAGGGATGGTTCTGTAGTAAAATGCATCATTAATGGCACTCAACTCACATGTATTTAGATGAACATTTTGGTTCTTATTTGTTTTTTATCCTTCTCATTTTTACTTTCTGATGGAGGTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCT-GCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTAAATTTTCTCTCTTGGTGCGTGAAAAAAA]

[+] EMBL AK072434             [GCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGTAACTCCTTTCCTCCTCCTGTTATTCAAGAACTTGGATTCTAGTTCCTTCGCTAGGAAGGAGAAGTACTGAAGTACTTTCTTAGGAAGGATAGAGAAGAGGGGGAGGGGAGTTGGACCTAGCCTGACAATTTTTGGTTTGGTTGTAGACTACTTGTCTATTACAACTATTAAAGAGATAGAAAGAGAATGTAACATGTTACATGTTCACTCTACAGGGCTAGAAATTCTGCTTTAGTTAGAGGAAAAAATGATTTTGGTGGGTTTGGATTATGATAGTGTAGATTGGTTGCATATACACTAGAATTGTTACATTTGGACTATTAGTGTAATTATACTTTTATCAATAGGTATAAAAATTGTATAGCAGATATATTTTCAGAGGGATAGTCTATTAGTTTCACTTGTGTGGGTCAGCAGGACGTTCGGCTAGGTTTTACTATTTACTGCGAGAGAAACATTTTAGGGGGACATTTTGGAGGTTTGGGCATGAAAAGGTCTGTCCTTTTATCAACTTCCATTAATTTATTGTATCTGCTTCAAAAGTTTTATGTTTTCCTGGTTCTAGATACAATTTTCTTTCAGTGCTGTAGTGCAGAACTGCAGACTACAGTTCAACTGTGCAGCACATTCTGAATTAGGCATTGACTATGTACTATGTTACTATGGTTTATTAATTTTGCAGGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAGACCAGGTGTGTGGCTTACATCTACTTATGAGATAACTGCTTAATAGTCAGTAATGTGTTGTGGTGAGATGATTTTAACTAGTTTGTGTAGATATTGCAGCCAATTTAAACAAACACTAGTCTAGGCTGAATTGTTGTTAAAAGCGTTCTTGTGGCTGCATATTTCAAAATTGGGTTCAGCTGCTTGTGTTTTTTTTCTCTGTTTGATTTTAAACTTATATGCCGCTCAAAAGATAATAGTATTGACCATCAAACATGCCTATTGATTATAAGGGCAGTCTCATAGTTATTAGGGTATACTAGGATGGGTTCTGAAGGAGTATGTGTAATATTACTGATTGATCCATCTCCAGAGGCATAACCTGTTTGTTTGCCTGACTCATATTCATATGCTTGGCATCTTGCCATTGTTATTTTGATCTGTAGTCTACTCATGTTTGATCAGTTATGCACTGACTTATAGATAATCATAAGCATTCCTATGTTTGTGATTTCCCTATGACTTGTAACGGAAAATTGGAAACTGAACCTTCCATAGCCATTGCTAACTACCTTCATCTGTTTGTCATGACTCATGAGGCAAACTAGTTTTTGTAGGGCACATTATTATGACATTAGTGATTTATGGCTTCATGGGTAATCATGTTTAGCATATGCTTGGTCTAACCGAAATACTTAGGGATGGTTCTGTAGTAAAATGCATCATTAATGGCACTCAACTCACATGTATTTAGATGAACATTTTGGTTCTTATTTGTTTTTTATCCTTCTCATTTTTACTTTCTGATGGAGGTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCT GCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATC                                       ]
[+] EMBL AU057258             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGGTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCTGGCTGCA                                                                                                                                                                                   ]
[-] EMBL CF308257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCT GCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTAAATTTTCTCTCTTGGTGCGTGAAAAAAA]
[-] EMBL CF278946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCT GCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATT                                                                           ]
[+] EMBL AU057259             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCT GCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTaaaaa                                           ]


>consensus_10785#0 GCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAA GAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCG CGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGAC GAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAA GTAACTCCTTTCCTCCTCCTGTTATTCAAGAACTTGGATTCTAGTTCCTTCGCTAGGAAG GAGAAGTACTGAAGTACTTTCTTAGGAAGGATAGAGAAGAGGGGGAGGGGAGTTGGACCT AGCCTGACAATTTTTGGTTTGGTTGTAGACTACTTGTCTATTACAACTATTAAAGAGATA GAAAGAGAATGTAACATGTTACATGTTCACTCTACAGGGCTAGAAATTCTGCTTTAGTTA GAGGAAAAAATGATTTTGGTGGGTTTGGATTATGATAGTGTAGATTGGTTGCATATACAC TAGAATTGTTACATTTGGACTATTAGTGTAATTATACTTTTATCAATAGGTATAAAAATT GTATAGCAGATATATTTTCAGAGGGATAGTCTATTAGTTTCACTTGTGTGGGTCAGCAGG ACGTTCGGCTAGGTTTTACTATTTACTGCGAGAGAAACATTTTAGGGGGACATTTTGGAG GTTTGGGCATGAAAAGGTCTGTCCTTTTATCAACTTCCATTAATTTATTGTATCTGCTTC AAAAGTTTTATGTTTTCCTGGTTCTAGATACAATTTTCTTTCAGTGCTGTAGTGCAGAAC TGCAGACTACAGTTCAACTGTGCAGCACATTCTGAATTAGGCATTGACTATGTACTATGT TACTATGGTTTATTAATTTTGCAGGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGG ATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAGACCAGGTG TGTGGCTTACATCTACTTATGAGATAACTGCTTAATAGTCAGTAATGTGTTGTGGTGAGA TGATTTTAACTAGTTTGTGTAGATATTGCAGCCAATTTAAACAAACACTAGTCTAGGCTG AATTGTTGTTAAAAGCGTTCTTGTGGCTGCATATTTCAAAATTGGGTTCAGCTGCTTGTG TTTTTTTTCTCTGTTTGATTTTAAACTTATATGCCGCTCAAAAGATAATAGTATTGACCA TCAAACATGCCTATTGATTATAAGGGCAGTCTCATAGTTATTAGGGTATACTAGGATGGG TTCTGAAGGAGTATGTGTAATATTACTGATTGATCCATCTCCAGAGGCATAACCTGTTTG TTTGCCTGACTCATATTCATATGCTTGGCATCTTGCCATTGTTATTTTGATCTGTAGTCT ACTCATGTTTGATCAGTTATGCACTGACTTATAGATAATCATAAGCATTCCTATGTTTGT GATTTCCCTATGACTTGTAACGGAAAATTGGAAACTGAACCTTCCATAGCCATTGCTAAC TACCTTCATCTGTTTGTCATGACTCATGAGGCAAACTAGTTTTTGTAGGGCACATTATTA TGACATTAGTGATTTATGGCTTCATGGGTAATCATGTTTAGCATATGCTTGGTCTAACCG AAATACTTAGGGATGGTTCTGTAGTAAAATGCATCATTAATGGCACTCAACTCACATGTA TTTAGATGAACATTTTGGTTCTTATTTGTTTTTTATCCTTCTCATTTTTACTTTCTGATG GAGGTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGA AAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACT AATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAG ATACCCGATGAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCGGT GGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATC GACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAG GAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTA GAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGA TGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGG CATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTAAATTTT CTCTCTTGGTGCGTGAAAAAAA



consensusID : consensus_10785#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 977
fasta sequence
                              [CATGGGCCTGAAGGAGTAGAAACTTCTTTTCCTGCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAG-ACCAGGNTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGNAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTAAAAAAAAAAAAAAAAAA]

[+] EMBL CF278945             [CATGGGCCTGAAGGAGTAGAAACTTCTTTTCCTGCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAG ACCAGGNTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATGNAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTGCCCGGTGGCCTGCTGGTAGAGCACCCGCTG                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF308256             [   tGGACTGAAGGAGTAGAAA  TCTTTTCCTGCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAGNACCAGG TTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCATAAGATACCCGATG AAGTTGTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU182803             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTCTTCTATGTTG CCGGTGGCCTGCTGGTANAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCATATGCTAGAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACTCTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTAAAAAAAAAAAAAAAAAA]


>consensus_10785#1 CATGGGCCTGAAGGAGTAGAAACTTCTTTTCCTGCTATCTTGGGCTCTTGCCTCCTTGGT GGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTCT CTCAGACTAATCCTCGGCTCCTCGTCGGCGTCGCGCCGCCAGATTCTCGCCGAGATGGGA TACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAAAGGAGAAGCCG GAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAAGCAGATGCTATAATGGAGAAGCTGAGG GATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCA GACCAGGNTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACCCCAGAAGAGGC ACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGATCTGTTCTTGT TACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAAGTTTATTTCCA TAAGATACCCGATGNAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGTCTTCTATGTTG CCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAGCTATTGTTGGC ACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGATCAAGGAGTCC CTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATGCTGAAGTTCAT ATGCTAGAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACTCTGCTTGGATT GGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAGCTACTTGCCGT GATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATCTGTTTGGATTA AAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10785#0      GCTATCTTGGGCTCTTGCCTCCTTGGTGGACTCGCCGCCGACTACTCTCGGAGAAGGAAA 60
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GAGCGAAGAATGGCCGCCTCATCGTCTCTCAGACTAATCCTCGGCTCCTCGTCGGCGTCG 120
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      CGCCGCCAGATTCTCGCCGAGATGGGATACAGCTTCACGCTTCTTAGTGCGGATATTGAC 180
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GAAAAGGAGATCAGAAAGGAGAAGCCGGAGGAGCTTGTGGTCGCGCTGGCTCATGCAAAA 240
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GTAACTCCTTTCCTCCTCCTGTTATTCAAGAACTTGGATTCTAGTTCCTTCGCTAGGAAG 300
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GAGAAGTACTGAAGTACTTTCTTAGGAAGGATAGAGAAGAGGGGGAGGGGAGTTGGACCT 360
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      AGCCTGACAATTTTTGGTTTGGTTGTAGACTACTTGTCTATTACAACTATTAAAGAGATA 420
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GAAAGAGAATGTAACATGTTACATGTTCACTCTACAGGGCTAGAAATTCTGCTTTAGTTA 480
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GAGGAAAAAATGATTTTGGTGGGTTTGGATTATGATAGTGTAGATTGGTTGCATATACAC 540
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TAGAATTGTTACATTTGGACTATTAGTGTAATTATACTTTTATCAATAGGTATAAAAATT 600
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GTATAGCAGATATATTTTCAGAGGGATAGTCTATTAGTTTCACTTGTGTGGGTCAGCAGG 660
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      ACGTTCGGCTAGGTTTTACTATTTACTGCGAGAGAAACATTTTAGGGGGACATTTTGGAG 720
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      GTTTGGGCATGAAAAGGTCTGTCCTTTTATCAACTTCCATTAATTTATTGTATCTGCTTC 780
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      AAAAGTTTTATGTTTTCCTGGTTCTAGATACAATTTTCTTTCAGTGCTGTAGTGCAGAAC 840
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TGCAGACTACAGTTCAACTGTGCAGCACATTCTGAATTAGGCATTGACTATGTACTATGT 900
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TACTATGGTTTATTAATTTTGCAGGCAGATGCTATAATGGAGAAGCTGAGGGATAATGGG 960
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      ATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGTTGATAACTGCAGACCAGGTG 1020
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TGTGGCTTACATCTACTTATGAGATAACTGCTTAATAGTCAGTAATGTGTTGTGGTGAGA 1080
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TGATTTTAACTAGTTTGTGTAGATATTGCAGCCAATTTAAACAAACACTAGTCTAGGCTG 1140
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      AATTGTTGTTAAAAGCGTTCTTGTGGCTGCATATTTCAAAATTGGGTTCAGCTGCTTGTG 1200
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TTTTTTTTCTCTGTTTGATTTTAAACTTATATGCCGCTCAAAAGATAATAGTATTGACCA 1260
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TCAAACATGCCTATTGATTATAAGGGCAGTCTCATAGTTATTAGGGTATACTAGGATGGG 1320
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TTCTGAAGGAGTATGTGTAATATTACTGATTGATCCATCTCCAGAGGCATAACCTGTTTG 1380
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      TTTGCCTGACTCATATTCATATGCTTGGCATCTTGCCATTGTTATTTTGATCTGTAGTCT 1440
consensus_10785#1      ------------------------------------------------------------
                                                                                   

consensus_10785#0      ACTCATGTTTGATCAGTTATGCACTGACTTATAGATAATCATAAGCATTCCTATGTTTGT 1500
consensus_10785#1      -CATGGGCCTGAAGGAGTAGAAACTTCTTTTCCTGCTATCTTGGGCTCTTGCCTCCTTGG 59
                        *    *  ***     **   ***   **       *** *  **  *    *  *** 

consensus_10785#0      --GATTTCCCTATGACTTGT-------AACGGAAAATTGGAAACTGAACCTTCCATAGCC 1551
consensus_10785#1      TGGACTCGCCGCCGACTACTCTCGGAGAAGGAAAGAGCGAAGAATGGCCGCCTCATCGTC 119
                         ** *  **   ****  *       ** * ** *  * * * **  *    *** * *

consensus_10785#0      ATTGCTAACTACCTTCATCTGTTTGTCATGACTCATGAGGCAAACTAGTTTTTG---TAG 1608
consensus_10785#1      TCTCAGACTAATCCTCGGCTCCTCGTCG-GCGTCGCGCCGCCAGATTCTCGCCGAGATGG 178
                         *   *   * * **  **  * ***  *  **  *  ** *  *  *    *   * *

consensus_10785#0      GGCACATTATTATGACA-TTAGTG-ATTTATGGCTTCATGGGTAATCATGTTTAGCATAT 1666
consensus_10785#1      GATACAGCTTCACGCTTCTTAGTGCGGATATTGACGAAAAGGAGATCAGAA--AGGAGAA 236
                       *  ***   * * *    ******    *** *    *  **  ****     ** * * 

consensus_10785#0      GCTTGGTCTAACCGAAATACTTAGGGATGGTTC-TGTAGTAAAATGCATCATTAATGGCA 1725
consensus_10785#1      GCCGGAGGAGCTTGTGG----TCGCGCTGGCTCATGCAAAAGCAGATGCTAT-AATGGAG 291
                       **  *        *       * * * *** ** ** *  *  *      ** *****  

consensus_10785#0      CTCAACTCACATGTATTTAGATGAACATTTTGGTTCTTATTTGTTTTTTATCCTTCTCAT 1785
consensus_10785#1      --AAGCTGAGGGATAATGGGATGATGAAGGAAATTCTTGATTCTCAAGAGACTACACTGT 349
                          * ** *    ** *  *****  *      *****  ** *       *       *

consensus_10785#0      TTTTACTTTCTGATGGAGGTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACC 1845
consensus_10785#1      TGATAACTGCAGACCAGGNTTGTGGTTCATGATGGAGTGATTAGAGAAAAACCTAGCACC 409
                       *  **  * * **    * *****************************************

consensus_10785#0      CCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGA 1905
consensus_10785#1      CCAGAAGAGGCACGAAAGTTCATCAAAGGATACTCCGAAAGCCATGCAGCGACAATTGGA 469
                       ************************************************************

consensus_10785#0      TCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAA 1965
consensus_10785#1      TCTGTTCTTGTTACTAATGTGAAAAGTGGAGCCAGAAAGGAAGGATGGGACAAAGCTGAA 529
                       ************************************************************

consensus_10785#0      GTTTATTTCCATAAGATACCCGATGAA-GTTGTTGAGAGTTTGATTGAGGAGGGCGATGT 2024
consensus_10785#1      GTTTATTTCCATAAGATACCCGATGNAAGTTGTTGAGAGTTTGATTGAGGAGGGCGATGT 589
                       ************************* * ********************************

consensus_10785#0      CTTCTATGTTGCC-GGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAG 2083
consensus_10785#1      CTTCTATGTTGCCCGGTGGCCTGCTGGTAGAGCACCCGCTGACTTCACCTCTTGTGGAAG 649
                       ************* **********************************************

consensus_10785#0      CTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGA 2143
consensus_10785#1      CTATTGTTGGCACCATCGACAGTGTAATGGGACTCCCGAAATCCCTCACGGAGAAGCTGA 709
                       ************************************************************

consensus_10785#0      TCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATG 2203
consensus_10785#1      TCAAGGAGTCCCTTGAGGAGCCATAGCTATTTTTTTTACCGGGACAACTGACTGCCCATG 769
                       ************************************************************

consensus_10785#0      CTGAAGTTCATATGCTAGAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACT 2263
consensus_10785#1      CTGAAGTTCATATGCTAGAATTTTTCACTCATCTGCTGCACAACCAACTCGTCATCCACT 829
                       ************************************************************

consensus_10785#0      CTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAG 2323
consensus_10785#1      CTGCTTGGATTGGAGGATGGAGATGCATCTTACCGATGTTGTCAGCTTGACTATGCTAAG 889
                       ************************************************************

consensus_10785#0      CTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATC 2383
consensus_10785#1      CTACTTGCCGTGATTGGCATTATTGTAGTAAAACCTGAGACTTTACTATGTGGATTAATC 949
                       ************************************************************

consensus_10785#0      TGTTTGGATTAAATTTTCTCTCTTGGTGCGTGAAAAAAA 2422
consensus_10785#1      TGTTTGGATTAAA-----------AAAAAAAAAAAAAAA 977
                       *************                   *******




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)