These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1455 fasta sequence [GATCAATTCATCTCATCGTCCATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACCAAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACAGATC-TTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCGACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCGCTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCG-CCACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCCCACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTCGCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTCCAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAAT-CCGTTCAAGCACGTGGCGGTGTACGCGGACATGGCGATCT-CGAGCGACGTGTTCTTCGGTGACCCGGACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATATGATATGATAGTA] [+] EMBL AK105978 [GATCAATTCATCTCATCGTCCATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACCAAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACAGATC TTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCGACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCGCTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCG CCACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCCCACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTCGCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTCCAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAAT TCGTTCAAGTACGTGGCGGTGTACGCGGACATGGCGATCT CGAGCGACGTGTTCTTCGGTGACCCGGACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGTTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATATGATATGATAGTA] [+] EMBL AK071606 [ AATTCATCTCATCGTCCATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACCAAGCCTCCTGCGACCTTTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACAGATC TTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCGACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCGCTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCG CCACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCCCACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTCGCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTCCAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAAT CCGTTCAAGCACGTGGCGGTGTACGCGGACATGGCGATCT CGAGCGACGTGTTCTTCGGTGACCCGGACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATATGATATGATAGTA] [+] EMBL CA756070 [ TCCATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACCAAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACAGATC TTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCGACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCGCTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCGNCCACGT CTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCCCACTGCTACCTCT ] [+] EMBL OSS4914A [ TCCATGGCGCCCAAGGTGGCGGTCACGGAGGCGACGGGNCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGNTCACCGTCATGCTGCTCTTCCAGTACCAGGNGCCG CGGACTACGGTCGCG CGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGGCG CGNCGCCGGTGATCGCACGTGGCGNCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGTTGTCGNCGAGGAGCAGCCGGCAACCAAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTNCAGCAACCAGTACAGATCTTTGAAGAAGAGGGCGNCGAGTTCCGG ] [+] EMBL OSS5069A [ CCATGGNGCCCAAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCNTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCNCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGNGGCGGCAATGGAACGGNGCCGC CCGNCGGTGATCGCANGTNGCGGCNNGGAGGCTAACATCACCGGCAAGNCTCCGACGNCTGCTACTGCTGTAGCCGAGGAGCAGCCGCCAACCAAGCCTTCTGCGACCTCTAC ] [+] EMBL AK104518 [ AAGGTGGCGGTCACGGAGGCGACGGGGCGGCAGGCGGCGTCGTTCGTGCTCGGCTGCGTGGCCACGCTCACCGTCATGCTGCTCTTCCAGTACCAGGCGCCGCCGGACTACGGCCGCGCCGCCAGGTCGCCGGTGCAGTTCTCCACCTCCAGAGACCAGCTGCTGCTGCACTGCGGCGGCAATGGAACGGCGCCGCCGCCGCCGGTGATCGCACGTGGCGGCGAGGAGGCTAACATCACCGGCAAGCCTCCGACGACTGCTACTGCTGTCGCCGAGGAGCAGCCGCCAACCAAGCCTCCTGCGACCTCTACTGCATCTTCACCAACTCATCATATTCCAGCAACCAGTACAGATC TTGAAGAAGAGGGCGGCGAGTTCCGGGGGTTGGCGGCGGCGGTGGCGCGGGCGGCGACGGATGACCGGACGGTGATCATCACGTGCGTGAACCACGCGTTCGCGGCGCCCGACTCGCTCCTGGACATCTTCCTCCAGGGCTTCCGCGTCGGCGACGGCACGCCGGAGCTCCTCCG CCACGTCCTCGTCGTCGCCATGGATCCCACCGCGCTCACCCGGTGCCGCGCCGTCCACCCCCACTGCTACCTCTACACCATGCCCGGCCTCGACGTCGACTTCACCTCCGAGAAGTTCTTCGCCTCCAAGGACTACCTCGAGCTCGTCTGGAGCAAGCTCAAGCTCCAGCGCCGAATTCTCCAGCTCGGCTACAACTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAAT CCGTTCAAGCACGTGGCGGTGTACGCGGACATGGCGATCT CGAGCGACGTGTTCTTCGGTGACCCGGACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATATCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATATG ] [+] EMBL AU078282 [ AACTTCCTCTTCACGGACGTTGACATTGTTTGGCTGAGGAATCCCGTTCAAGCACGTGCCGGTGTACGCGGACATGGCGATCTCCGAGCGACGTGTTCTTCGGTGACCCGNACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATAaaaa ] [+] EMBL AU078281 [ CTTCCTCTTCACGGACGTTGACATTGTGTGGCTGAGGAAT CCGTTCAAGCACGTGGCGGTGTACGCGGACATGGCGATCT CGAGCGACGTGTTCTTCGGTGACCCGGACAACATCGACAACTTCCCAAACACGGGCTTCTTCTACGTGAAGCCGAGCGCGAGGACGATCGCCATGACCAAGGAGTGGCACGAGGCGAGGAGCTCGCACCCGGGGCTCAACGAGCAGCCGGTGTTCAACCACATCAAGAAGAAGCTGGTGAAGAAGCTGAAGCTCAAGGTTCAGTACCTGGACACGGCCTACATCGGCGGATTCTGCAGCTACGGCAAGGATCTGAGCAAGATCTGCACCATGCACGCCAACTGCTGCATCGGCCTCCAATCCAAGATCAGTGATCTCAAGGGTGTTCTTGCTGACTGGAAGAACTACACCAGGTTGCCACCCTGGGCAAAGCCCAATGCCAGGTGGACTGTGCCTGGTAAATGCATCCATTGATTTTGATTGTCGATCGGGCAGTATCTGGTGTTGTAGGCTACGTACAGTCAGGAAGATAGCTTTATTTGCACATGAAAGGGCGAATTTTGTTTTTTTTGGTTTGTTGTAGATTGATGGGTCGATTTCAAGTTATATTACTGTATACCTGACGGCAGACAAGTATACGCATGATGGGCAAACTATATGATATGATAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||