These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10819#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2127 fasta sequence [GGTATTTGATTGTGCTCGATAATGTCTGGGATGCAGCTGCATTTCATGGCATATCAAGTTTCTTGATGGACAGCGGTAATGCTAGTCGAATAATCATCACGACTAGGACAAGTGATGTTGCTTCACTGGCTCAAGAAACATACAAGCTCAAGCTTAAGCCCTTGGAGGATGACGATGCAATGGAACTATTTTGCAGAAGGGCTTTTCATAATAGCAACAAGGTATGCCCGCCTCACCTTGAGGATCTGTGTAAACAGATTGTGAGGAAGTGTGGTGGCTTACCATCAGCCATCTATGCCATAGGCAATGTGCTTGCAGTCAGAGAAAAGACGGAAGTGGCTTGGAAAATAATGAATGATCAGTTCCAGTGTATGTTGGAGGACAACCCTGGCTTGGGAGAAGTGAGGAGTGCCCTGAGCGTTAGCATTTTGTTCCTTCCAAGGCATCTCAAGAACTGCTTCCTCTACTGCAGCCTGTTCCCACAGAACTACCGGTTGTCACGTGAAAGCCTTGTGAAGCTGTGGACAGCAGAAGGATTCATAACGAAGAGAGGAAGCAGCACTCTGGAAGATGTTGCAGATGAATACCTGATGGAGCTGATCCGAGGAAGCTTGTTGCAACTCCTGGAAACAGATGAAATTGGCAGAGTAGCCTTCTGCAAGATGCATGACATTGTGCGTGACTTGGCTTTGTCCTACTCCAGAAAGGAGATGTTTGGCCTGAGTGATGGAGACCTCCAAACAGATCAAAAGGAAGATGTTCGTCGCCTGTCAATATCCAAGTGCAACAAGAATGTGGGATCAATCTTGGAGTTTCCTCGCCTTCGGACCTTCGTCGCTACCAATGGAGGCGCAGAGTCAGACCTGTTACATTCTCTCATACAAAAATCGAAGTACCTTGCTGTTCTGGAGCTGCAAGACTCACCCATCGACATAATTCCAGCAAATATTGGAGAGTTGTTCAACCTGCACTATCTTGGATTGCGGAGGACCAATGTGAAATCACTTCCAAAATCTATCGAGAAACTTACCAATCTGGAGACTCTGGACCTGAAATACACCGGGGTAGATGTGCTGCCCAAGGAGATCTGTAAACTGAAGAAGCTGAGGCACTTGTTCGCCGAGAAACTCATTGACCGTAATCGCCAAGTGTTCAGATACTTCAAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGAACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATCAAATACTTGTCACTAAGTTCCTCGAGACTCGGCAATGATCCGTTCCCGCTCCTCGCAAAGAACATGAAGAACCTCATCTACCTGAGCATCAGGAAGTGGTGCTGTGCTGAGGAGGTGGCTCTCCGTGAAGGGTGGTTCCCTCGCCTGACAACACTCTTCCTTGGTGACATGAAGCAGGTGCACACTATTGTCATCGAGCCGTCAGCGGTTGAGAGCTTGGAGGCGCTGTACTTGGTTTCTCTGACGGCTATGACAGCGGTTCCGACAGGCTTGGAGCTCGTTGGGTCGCTCAGGAAGCTCGTTGTGTGGGGGCAGTCAGACGA-TTTCAAGCTGGAGTGGAAGAGGGAGAACTGGGAAACGAAGCTGCGCCATATTCCGGAAATTC-CATTTAATTGATCAAGAACTGCTTAAAATATGGATGGATTATATCTTGCATGACTACT-GAATC-GGTCTCTGGACTGATTCCTCCTGCTTT-GGTTCCACCTGAGTGTGATTTGTTTCTCTTTGTC--AATTTTACGTTTGTAATATGTCTGAAGTTACTGAACTTCTATGATGTAATCTAAATTCTGAATTTTCTTGTACCAAACTACCGATTCTTGTTTGTGTACTACATATATTG] [+] EMBL BF430635 [GGTATTTGATTGTGCTCGATAATGTCTGGGATGCAGCTGCATTTCATGGCATATCAAGTTTCTTGATGGACAGCGGTAATGCTAGTCGAATAATCATCACGACTAGGACAAGTGATGTTGCTTCACTGGCTCAAGAAACATACAAGCTCAAGCTTAAGCCCTTGGAGGATGACGATGCAATGGAACTATTTTGCAGAAGGGCTTTTCATAATAGCAACAAGGTATGCCCGCCTCACCTTGAGGATCTGTGTAAACAGATTGTGAGGAAGTGTGGTGGCTTACCATCAGCCATCTATGCCATAGGCAATGTGCTTGCAGTCAGAGAAAAGACGGAAGTGGCTTGGAAAATAATGAATGATCAGTTCCAGTGTATGTTGGAGGACAACCCTGGCTTGGGAGAAGTGAGGAGTGCCCTGAGCGTTAGCATTTTGTTCCTTCCAAGGCATCTCAAGAACTGCTTCCTCTACTGCAGCCTGTTCCCACAGAACTACCGGTTGTCACGTGAAAGCCTTGTGAAGCTGTGGACAGCAGAAGGATTCATAACGAAGAGAGGAAGCAGCACTCTGGAAGATGTTGCAGATGAATACCTGATGGAGCTGATCCGAGGAAGCTTGTTGCAACTCCTGGAAACAGATGAAATTGGCAGAGTAGCCTTCTGCAAGATGCATGACATTGTGCGTGACTTGGCTT ] [-] EMBL CB630522 [ GAAATTGGCAGAGTAGCCTTCTGCAAGATGCATGACATTGTGCGTGACTTGGCTCTGTCCTACTCCAGAAAGGAGATGTTTGGCCTGAGTGATGGAGACCTCCAAACAGATCAAAAGGAAGATGTTCGTCGCCTGTCAATATCCAAGTGCAACAAGAATGTGGGATCAATCTTGGAGTTTCCTCGCCTTCGGACCTTCATCACTACCAATGGAGGCGCAGAGTCAGACCTGTTACATTCTCTCATACAAAAATCGAAGTACCTTGCTGTTCTGGAGCTGCAAGACTCACCCATCGACATAATTCCAGCAAATATTGGAGAGCTGTTCAACCTGCACTATCTTGGATTGCGGAGGACCAATGTGAAATCACTTCCAAAATCTATCGAGAAACTTACCAATCTGGAGACTCTGGACCTGAAATACACCGGGGTAGATGTGCTGCCCAAGGAGATCTGTAAACTGAAGAAGCTGAGGCACTTGTTCGCCGAGAAACTCATTGACCGTAATCGCCAAGTGTTCAGATACTTCAAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGAACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATT ] [-] EMBL CB646191 [ TGTTTGGCCTGAGTGATGGAGACCTCCAAACAGATCAAAAGGAAGATGTTCGTCGCCTGTCAATATCCAAGTGCAACAAGAATGTGGGATCAATCTTGGAGTTTCCTCGCCTTCGGACCTTCGTCGCTACCAATGGAGGCGCAGAGTCAGACCTGTTACATTCTCTCATACAAAAATCGAAGTACCTTGCTGTTCTGGAGCTGCAAGACTCACCCATCGACATAATTCCAGCAAATATTGGAGAGTTGTTCAACCTGCACTATCTTGGATTGCGGAGGACCAATGTGAAATCACTTCCAAAATCTATCGAGAAACTTACCAATCTGGAGACTCTGGACCTGAAATACACCGGGGTAGATGTGCTGCCCAAGGAGATCTGTAAACTGAAGAAGCTGAGGCACTTGTTCGCCGAGAAACTCATTGACCGTAATCGCCAAGTGTTCAGATACTTCAAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGAACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATCAAATACTTGTg ] [-] EMBL CB646212 [ TGTNTGGCCTGAGTGATGGAGACCTCCAAACAGATCAAAAGGAAGATGTTCGTCGCCTGTCAATATCCAAGTGCAACAAGAATGTGGGATCAATCTGNGAGTTTCCTCGCCTTCGGACCTTCGTCGCTACCAATGGAGGCGCAGAGTCAGACCTGTTACATTCTCTCATACAAAAATCGAAGTACCTTGCTGTTCTGGAGCTGCAAGACTCACCCATCGACATAATTCCAGCAAATATTGGAGAGTTGTTCAACCTGCACTATCTTGGATTGCGGAGGACCAATGTGAAATCACTTCCAAAATCTATCGAGAAACTTACCAATCTGGAGACTCTGGACCTGAAATACACCGGGGTAGATGTGCTGCCCAAGGAGATCTGTAAACTGAAGAAGCTGAGGCACTTGTTCGCCGAGAAACTCATTGACCGTAATCGCCAAGTGTTCAGATACTTCAAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGAACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATCAAATttaatg ] [+] EMBL CB656526 [ GGGATCAATCTTGGAGTTTCCTCGCCTTCGGACCTTCGTCGCTACCAATGGAGGCGCAGAGTCAGACCTGTTACATTCTCTCATACAAAAATCGAAGTACCTTGCTGTTCTGGAGCTGCAAGACTCACCCATCGACATAATTCCAGCAAATATTGGAGAGTTGTTCAACCTGCACTATCTTGGATTGCGGAGGACCAATGTGAAATCACTTCCAAAATCTATCGAGAAACTTACCAATCTGGAGACTCTGGACCTGAAATACACCGGGGTAGATGTGCTGCCCAAGGAGATCTGTAAACTGAAGAAGCTGAGGCACTTGTTCGCCGAGAAACTCATTGACCGTAATCGCCAAGTGTTCAGATACTTCAAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGAACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATCAAATACTTGTCACTAAGTTCCTCGAGACTCGGCAATGATCCGTTCCCGCTCCTCGCAAAGAACATG ] [+] EMBL CA766029 [ ATACTT AAAGGTATGCAGCTGCCACATGGATTTTCACACATGAATGAAATTCAAACCCTTGAAACAGTTGAGGCAACGAAGGACTCCATTGAGCTGCTGGGGAAGCTGACTGCACTGAGGACCCTGTGGGTTGAGAATGTGCATCGCGCTGACTGCACAAAGTTGTTTGATTCATTGTCAGAAATGGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATGAAATACTTGTCACTAAGTTCCTCGAGACTTGGCAATGATCCGTTCCCGCTCCTCGCAAAGAACATGAAGAACCTCATCTACCTGAGCATCAGGAAGTGGTGCTGTGCTGAGGAGGTGGCTCTCCGTGAAGGGTGGTTCCCTCGCCTGACAACACTCTTCCTTGGTGACATGAAGCAGGTGCACACTGTTGTCATTGAGCCGTCAGCGGTTGAGAGCTTGGAGGCACTGTACTTGGTGTCTCTGACGGCTATGACAGCGGTTCCGACAGGCTTGGAGCTCGTTGGGTCGCTCAGGAAGCTCGTTGTGTGGGGGCAGTCAGACGATTTTCAAGCTGGAGTGGAAGAGGGAGAACTGGGAAACGAANCTGCGCCATGTGCCCGNAATTC CATTTAATTGATCAAGAACTGNTTAAAATTTGGATGGATTATTTTTTGCATGNCTACTGGAATCGGGCCTCTGGACTGATTCCTCGGGCTTTGGGTTCTACTTGGAAGGGANTTATTTATCccnttg gcc ] [-] EMBL CB656527 [ GGAGAATCTCTCAAGCCTGCTCGTTAGTGCCAGCGATGAATATGAGGTCCTTAACTTTGATGCATTCAGTCCTTCTGAGATGAAGCTCCAGAAGCTCATCATTAGAGGCTGCCTCGAGAATGACACATTTGACAAGCTTATGTTCAAAAACCTTGGCTCACACATCAAATACTTGTCACTAAGTTCCTCGAGACTCGGCAATGATCCGTTCCCGCTCCTCGCAAAGAACATGAAGAACCTCATCTACCTGAGCATCAGGAAGTGGTGCTGTGCTGAGGAGGTGGCTCTCCGTGAAGGGTGGTTCCCTCGCCTGACAACACTCTTCCTTGGTGACATGAAGCAGGTGCACACTATTGTCATCGAGCCGTCAGCGGTTGAGAGCTTGGAGGCGCTGTACTTGGTTTCTCTGACGGCTATGACAGCGGTTCCGACAGGCTTGGAGCTCGTTGGGTCGCTCAGGAAGCTCGTTGTGTGGGGGCAGTCAGACGA TTTCAAGCTGGAGTGGAAGAGGGAGAACTGGGAAACGAAGCTGCGCCATATTCCGGAAATTCGCATTTAATTGATCAAGAACTGCTTAAAATATGGATGGATTATATCTTGCATGACTACT GAATC GGTCTCTGGACTGATTCCTCCTGCTTT GGTTCCACCTGAGTGTGATTTGTTTCTCTTTGTCTGAATTTTACGTTTGTAATATGTCTGAAGTTACTGAACTTCTATGATGTAATCTAAATTCTGAATTTTCTTGTACCAAACTACCGATTCTTGTTTGTGTACTACATATA ] [-] EMBL CB659930 [ GATCCGTTCCCGCTCCTCGCAAAGAACATGAAGAACCTCATCTACCTGAGCATCAGGAAGTGGTGCTGTGCTGAGGAGGTGGCTCTCCGTGAAGGGTGGTTCCCTCGCCTGACAACACTCTTCCTTGGTGACATGAAGCAGGTGCACACTATTGTCATCGAGCCGTCAGCGGTTGAGAGCTTGGAGGCGCTGTACTTGGTTTCTCTGACGGCTATGACAGCGGTTCCGACAGGCTTGGAGCTCGTTGGGTCGCTCAGGAAGCTCGTTGTGTGGGGGCAGTCAGACGA TTTCAAGCTGGAGTGGAAGAGGGAGAACTGGGAAACGAAGCTGCGCCATATTCCGGAAATTCGCATTTAATTGATCAAGAACTGCTTAAAATATGGATGGATTATATCTTGCATGACTACT GAATC GGTCTCTGGACTGATTCCTCCTGCTTT GGTTCCACCTGAGTGTGATTTGTTTCTCTTTGTCTGAATTTTACGTTTGTAATATGTCTGAAGTTACTGAACTTCTATGATGTAATCTAAATTCTGAATTTTCTTGTACCAAACTACCGATTCTCGTTTGTGTAATACATATATTG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||