cluster # 1082

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Oryza sativa
cluster # 1082 cluster # 1082 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1082#0 length = 304 sequences # 2

consensusID : consensus_1082#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 304
fasta sequence

                              [TTACACAATAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAACGAAGCAAATATTCGGGTACGCGGAAAGAGGAGAACGTCGCGCGTCTCACCGCAGCCTTCATGAAA-GC-AAGTGGACCTCACCGCCGTTGCTCGCCGGAAATTTCCACACTCACTTGCCGGGGAGCGTAACTGGCCGTCTCAGATGGCCATGCGTTGTTGTTGACGGGGCTGGCGAGGTGGCTGGCCAGGTTCTCCAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAA]

[+] EMBL OS37915              [TTACACAATAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAACGAAGCAAATATTCGGGTACGCGGAAAGAGGAGAACGTCGCGCGTCTCACCGCAGCCTTCATGAAA GC AAGTGGACCTCACCGCCGTTGCTCGCCGGAAATTTCCACACTCACTTGCCGGGGAGCGTAACTGGCCGTCTCAGATGGCCATGCGTTGTTGTTGACGGGGCTGGCGAGGTGGCTGGCCAGGTTCTCCAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAA]
[+] EMBL OS37980              [            TCCATTGTACCTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAACGAAGCAAATATTCGGGTACGCGGAGAGAGGAGAACGTCGCGCGTCTCACCGCAGSCTTCATAAAAGGCGAATTGG                                                                                                                                                               ]




>consensus_1082#0
TTACACAATAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACA
ATCTGAACGAACGAAGCAAATATTCGGGTACGCGGAAAGAGGAGAACGTCGCGCGTCTCA
CCGCAGCCTTCATGAAAGCAAGTGGACCTCACCGCCGTTGCTCGCCGGAAATTTCCACAC
TCACTTGCCGGGGAGCGTAACTGGCCGTCTCAGATGGCCATGCGTTGTTGTTGACGGGGC
TGGCGAGGTGGCTGGCCAGGTTCTCCAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGA
AGAA

clustalw multiple alignements is not computed in this case