cluster # 10830

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Oryza sativa
cluster # 10830 cluster # 10830 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10830#0 length = 839 sequences # 8
consensusID : consensus_10830#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 839
fasta sequence
                              [TTTTTTTTTTTTTTTTTTAAATTTCTTAATTATAGC-GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG-CCGCCGCGC-AT-CATCTGCTTGAAC-TCGAGGAAGTCGAC-GCGGCCGTCGCCGTCCCTGTCGACCTGGCCGATCATGCGGCCGCAGTCCTCCGCCGTCC-GGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGCGGTGGTGGTGG]

[+] EMBL AU183053             [TTTTTTTTTTTTTTTTTTAAATTTCTTAATTATAGCAGGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU197581             [         TTTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU029820             [          TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCANCGGAGCGTGGCGAACGGGCCCGCCGGGA AT CATCTGCTTGAACTTCGAGGAAGTCGACGGGGGCCGTtggc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AU029816             [          TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGTG CCGCCG GN ATNCATCTGCTTGAAC TCGAGGAAGTCGAC GCGGNCGTCGACGTCCCTGTCGACCTGGCCGATCATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL C99000               [          TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGNTCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGCAAT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTNGACCTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU175134             [          TTTTTTTTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGA AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK100200             [                TTAAATTTCTTAATTATAGC GGCTGCTTTATGCTTTTACCACCTCCGAAACTTATCAGCTTATGATCACAATACATTTCCTGCGAAATTCGATCGCGTGTGTGGATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCGTACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGAGCGTGGCGAACGCG CCGCCGCGC AT CATCTGCTTGAAC TCGAGGAAGTCGAC GCGGCCGTCGCCGTCCCTGTCGACCTGGCCGATCATGCGGCCGCAGTCCTCCGCCGTCC GGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGCGGTGGTGGTGG]
[-] EMBL AU101243             [                                                                                                                                                                                                                                                                                                                                                         CCTCCGCCGTCCGGGCCCTGCTTGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGTTCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGCCGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGTCCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCTCCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCCGGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGCACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTGCACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGC           ]




>consensus_10830#0
TTTTTTTTTTTTTTTTTTAAATTTCTTAATTATAGCGGCTGCTTTATGCTTTTACCACCT
CCGAAACTTATCAGCTTATGATCACAATACATTTTCTGCGAAATTCGATCGCGTGTGTGG
ATCGTAGTACACTCATACAAACTGTCATGCACAAGCTATGTTAAAACAAACAATCGACCG
TACGTTGGGTATATAGACGATACAACGACGCTCGCGTGGATGACGCCGCCGATCACCGGA
GCGTGGCGAACGCGCCGCCGCGCATCATCTGCTTGAACTCGAGGAAGTCGACGCGGCCGT
CGCCGTCCCTGTCGACCTGGCCGATCATGCGGCCGCAGTCCTCCGCCGTCCGGCCCTGCT
TGATCCCCAGCGACGCCAGCACGGCGCCCAGCTCGTCCACGGTGATGAACCCGTCGCCGT
TCCGGTCGAACACGTCGAACGCCTCGCGCATGCTCGCCTCATCCACGTCGCAGGCGCCGC
CGCCGCCGCCGCCGCCGCCGTCGACGCGCATGACGGTCTCGTACAGCTGGGTGAACTCGT
CCATGTCGACGCACCCGTCGCCGTTGGCGTCGATGCGGGCGATGGTGGCGGCGAGCTCCT
CCCTGTGCACGGGCATCCCGAGCCTCTCCAGCGACTCCGTCAGCTCCTCCCGGGTGATCC
GGCCGTCGCCGTCACGGTCGAACAGCTCGAACACCCGCCGGAGCTCCGCCTGCTGGTCGC
ACGCCATCCCCTCGCCGCCGGCCGGCGCCCGCCGCCGCTAGCTGGTGGTGCAGCCGGCTG
CACGTACGGCCACAGGGGAGCGTGTGGGAGGGAGGCGTCGGAGGCCGCGGTGGTGGTGG
clustalw multiple alignements is not computed in this case