These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10837#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2354 fasta sequence [AAAAAAAGTCGAATCGACAAGCAAACAAGCTAGCTGCGCCACGGCGAAGTGATGCAAACACCATGCTTCGTGAGCCTTTCCACTGTTTCACTCTGCTCCTGCTCCTCCTCGCGGCTGCCGACCGCTGCGCCGCGGCCACCGGCGGCAGCGGCGGCCTGCAGTTCGCGTACGATGGCTTCTCGGGCGCCAACCTCACCCTCGACGGCGCGGCCACGGTCACGGCGAGCGGCCTCCTCATGCTGACCAACGGGTCCATCCAGATGAAAGGCCACGCGTTCCACCCGTCGCCGCTCCCGCTCCGCGCGGCGAGGTCCTTCTCGACGACGTTCGTGTTCGCCATCTTCGGGCAGTACGCCGACTTCAGCAGCCACGGCCTGGCCTTCTTCGTCTCCGCGTCCGCGGACGCGTTCGCCGCCGCGCTGCCTGGCCAGTTCCTGGGCCTCTTCAACGGCACCGGCGCCACCACCGGCAACCGGAGCGCCGCCGGCGTCTTCGCCGTGGAGTTCGACACGCTCTTCAACGCCGAGTTCCACGACCTGAACAGCAACCACGTCGGCGTCGACGTCAACAGCCTGACGTCGGTCAAGGCCGCCGACGCCGGCTACTACGATGACGTCACCGGCCAGTTCCGGAACCTGACCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCCCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCAAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTCGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGATGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA-ATCGT-GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG-CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC-TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAAAAAAAGGCACACATCAGATACTCCCAAAGTAGGGCCAAAAATGGTGCTTGTAGCATTGCAGTTAAGAGTATGTTAACGGTGTAACTAGATGCTTTAACTATCTTGTTCTCCTTGTACTATGAAATCGAGATTCTTCTGTCTTGATTA] [+] EMBL AK105111 [AAAAAAAGTCGAATCGACAAGCAAACAAGCTAGCTGCGCCACGGCGAAGTGATGCAAACACCATGCTTCGTGAGCCTTTCCACTGTTTCACTCTGCTCCTGCTCCTCCTCGCGGCTGCCGACCGCTGCGCCGCGGCCACCGGCGGCAGCGGCGGCCTGCAGTTCGCGTACGATGGCTTCTCGGGCGCCAACCTCACCCTCGACGGCGCGGCCACGGTCACGGCGAGCGGCCTCCTCATGCTGACCAACGGGTCCATCCAGATGAAAGGCCACGCGTTCCACCCGTCGCCGCTCCCGCTCCGCGCGGCGAGGTCCTTCTCGACGACGTTCGTGTTCGCCATCTTCGGGCAGTACGCCGACTTCAGCAGCCACGGCCTGGCCTTCTTCGTCTCCGCGTCCGCGGACGCGTTCGCCGCCGCGCTGCCTGGCCAGTTCCTGGGCCTCTTCAACGGCACCGGCGCCACCACCGGCAACCGGAGCGCCGCCGGCGTCTTCGCCGTGGAGTTCGACACGCTCTTCAACGCCGAGTTCCACGACCTGAACAGCAACCACGTCGGCGTCGACGTCAACAGCCTGACGTCGGTCAAGGCCGCCGACGCCGGCTACTACGATGACGTCACCGGCCAGTTCCGGAACCTGACCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCCCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGTGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCAAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTCGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGATGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCTGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCGGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTTTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAATTATAATGGACTGT ] [+] EMBL CB685293 [ ACCTCATCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCTCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACCAGAACCTCCTTGGCATGGGAGGGTTCGGGAGCGTGT ] [-] EMBL CB625707 [ GCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCGAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTTGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGGTGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGC ] [+] EMBL CF197340 [ CATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCNNNAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATANGNNNNATCGGGTTTC NNNGTTTATTACTTCTAGTTTA ] [-] EMBL CB685294 [ GTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCTGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCGGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTTTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAATTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAAAAAAAGGCACACATCAGATACTCCCAAAGTAGGGCCAAAAATGGTGCTTGTAGCATTGCAGTTAAGAGTATGTTAACGGTGTAACTAGATGCTTTAACTATCTTGTTCTCCTTGTACTATGAAATCGAGATTCTTCTGTCTTGATTA] [+] EMBL BM419187 [ GGGCACACC GCAA GCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCTGCGAGGTCACCTGCGGAAGAA GCC ATCGTGGCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAGCCAAGGGTGCACTTGTTAACGTGGT GACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGT CCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAACCAGTTGGTGAGGATATGAAAAATCGGGTTTCNNCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATCCCCNGTTTAGGGGGCTAAAAATTCAAAAA ] [+] EMBL BI812360 [ GCGCATTCCTCCTCGAGGTCACCTGCGGAAGAA GCCACATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCC ATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACCAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAA ] [+] EMBL BM419671 [ GTGGACTGGGTGACTGACCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||