These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10839#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3382 fasta sequence [TCCGCATTTCTCGCCTCGCCCACCCCCACACGCAACCGACCGACCCATCCTTACCACCCACCCCACCCCACGCTCCCCTCCTCCGCGGGCTTGGCATTTCAACAAACACCTCGCGTGCACCTCCCTCGCCGCCACCTCCTCGCCGCGCGCCGCCTCCCACTCCTCCTCCTCCCGGCCTCCGCGCGCCACCGGCCTCGGCAGCTCCCCGTGGGACGCGGGGGAACAAGACGAGCCCGAGCAGGAGCAGGAGCAACATGGACTGGGACAGCGCCACCCCCGGCTTCCGCGCGCGGGTGAAGGACCTCACCGGGCCACTCCCGGCCGAGCGGGAAGGGGTTGACGTCAAGGAGGAGAGGCTCCATGAAGCGGTGGAGCTCGCCGTCGACTTCCACTCGGCGCTCGCGTACCACGTCGTGGGATACGTGCGCGCCGCGCTCGGGGAGGACGAGTTGGCGCTCGATTCCCTTCGCCTCGCCAGGGATCTCGCCCCCAGCGACCTCGGCATCGCCTTCACCCTCGCCAAGAGGTACGCCGCTAGGGAGCAGTTTGATCTGGCGGTGGAAGCGTGCCAACGCGCGCTCGGCCGAGGTGACGCTGATCTCGTCGACCCGCAGCTAAACGCCGTCTTCGAGTCCCGCCACTTGGAGCCGAGCAAAGAGGCGCGGATCTCCACTGCTAAGAATGGCCTCAAGCAACTCCTTATCTCCGCCTTGTCGAAGATCGCCATCCCGATGGCCCGAGATCGTTGGAACGGCATGAGCGAGGAGACGCGCCGCAGTTTCCTGACAGTGGGTATTGACGAGATGGTAGCATACTGCTGTGCTAAGCCGTCTGACGAGTGTCAGATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCTGCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATGTTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGGAGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCAATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGTACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTGAATGGAAGGGCCGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTATGAAAGATTTCCTATGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTGAGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTAATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCACCATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGAT-AAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTCTGC---GGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAGACAACTGCTTACAGTTCTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATCACCTTTTTAGTTAGAATACAGATAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTTCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTCTACTACCAGATATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCACTACTTTTAGGATGATATACCAGGTATCTTAATTACTTCGAAACA] [+] EMBL AK101994 [TCCGCATTTCTCGCCTCGCCCACCCCCACACGCAACCGACCGACCCATCCTTACCACCCACCCCACCCCACGCTCCCCTCCTCCGCGGGCTTGGCATTTCAACAAACACCTCGCGTGCACCTCCCTCGCCGCCACCTCCTCGCCGCGCGCCGCCTCCCACTCCTCCTCCTCCCGGCCTCCGCGCGCCACCGGCCTCGGCAGCTCCCCGTGGGACGCGGGGGAACAAGACGAGCCCGAGCAGGAGCAGGAGCAACATGGACTGGGACAGCGCCACCCCCGGCTTCCGCGCGCGGGTGAAGGACCTCACCGGGCCACTCCCGGCCGAGCGGGAAGGGGTTGACGTCAAGGAGGAGAGGCTCCATGAAGCGGTGGAGCTCGCCGTCGACTTCCACTCGGCGCTCGCGTACCACGTCGTGGGATACGTGCGCGCCGCGCTCGGGGAGGACGAGTTGGCGCTCGATTCCCTTCGCCTCGCCAGGGATCTCGCCCCCAGCGACCTCGGCATCGCCTTCACCCTCGCCAAGAGGTACGCCGCTAGGGAGCAGTTTGATCTGGCGGTGGAAGCGTGCCAACGCGCGCTCGGCCGAGGTGACGCTGATCTCGTCGACCCGCAGCTAAACGCCGTCTTCGAGTCCCGCCACTTGGAGCCGAGCAAAGAGGCGCGGATCTCCACTGCTAAGAATGGCCTCAAGCAACTCCTTATCTCCGCCTTGTCGAAGATCGCCATCCCGATGGCCCGAGATCGTTGGAACGGCATGAGCGAGGAGACGCGCCGCAGTTTCCTGACAGTGGGTATTGACGAGATGGTAGCATACTGCTGTGCTAAGCCGTCTGACGAGTGTCAGATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCTGCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATGTTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGGAGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCAATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGTACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTGAATGGAAGGGCCGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTATGAAAGATTTCCTATGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTGAGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTAATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCACCATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGAT AAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTCTGC GGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATCTTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAGACAACTGCTTACAGTTCTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATCACCTTTTTAGTTAGAATACAGATAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTTCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTCTACTACCAGATATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCACTACTTTTAGGATGATATACCAGGTATCTTAATTACTTCGAAACA] [+] EMBL CF305679 [ ACAACCTGATCAAATTCACGAAAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTGGAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCGAGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTATAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGTTTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGCAAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTAAATGGAAGGGCCGCTGCATTGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATTTTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATTTGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTAT ] [+] EMBL CF324391 [ AAAACAGAGATCCAGTTCAAGAAGATATTAATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTACCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGCTTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTAACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCGCCATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTGGAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGATAAAGAGTGACTCTACAGCAACTTAT ] [+] EMBL CA767041 [ ACATTTCGAGCAATGGAGTAACTGGAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCATTGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATTTTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATGCTTTTAGTGAT AAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTACATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCAACGTTGGTGCAAGTGAACTGCGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCCCAATCATCCGNCACGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGGTTATGAANGCCTGCACTCAGAATGCAAGTATACTATGGNTTCTGCGCAGGTATTTCGNGCTGANGGGCGAGATATCTGCCTTGCTCGANAAAAGGANAAGNGGCTTGNATATGATAAC ] [+] EMBL D43397 [ TTTTAGTGAT AAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTTTAATNAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGAAATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCAACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGATGCCTCTCGCATGAACTTTTTGGGATGCACAAGANTGCAACAGNGAGCACATATTTTCTCAACGg ] consensusID : consensus_10839#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence [TGCCTCTCGCATGAACTTTTTGGGATGCCCAAGAATGCAACAGAGAGCACATATTTCTCAACGTTGGTGCAAGTGANCTGCGGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCCCAATCATCCGCCACGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTTTGCGCAGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATTTTTTTCGAGCGTATCGACCCAGTTTCAGAAGTCCCAGTCTAGACAACTGCTTACAGTTTTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATCCCCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTTCGTCTCTATAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762268 [TGCCTCTCGCATGAACTTTTTGGGATGCCCAAGAATGCAACAGAGAGCACATATTTCTCAACGTTGGTGCAAGTGANCTGCGGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAATCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCCCAATCATCCGCCACGTTACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTACTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAATGCAAGTATACTATGGTTTTTGCGCAGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTTGCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATTTTTTTCGAGCGTATCGACCCAGTTTCAGAAGTCCCAGTCTAGACAACTGCTTACAGTTTTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATCCCCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTTCGTCTCTATAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10839#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 564 fasta sequence [AGACGAGACAAGGGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATTTTTTTCGAGCGTATCGACCCAGTTTCAGAAGTCACAGTCTAGACAACTGCTTACAGTTTTACCTGGAAACCGAATCA-GGGGGCTATTTTTGATGGCTGAGTAATCACCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTCCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTTTACTACCAGATATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCCCTACTTTTAGGATGATATACCAGGTATTTTAATTACTTCGAAACAGCTTTTCTTGAGTCCAGTTCTTGCACGAGTGTGGCCTTGGACTGTTGCTGTGATTGAGAATTGGTCCTTGATCAGTTGATCCTTCCCTGCAGCGAAAAGTTTTTTTAAAAAAAAAAAAAAAAAAAAAGAAA] [-] EMBL CA761070 [AGACGAGACAAGGGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTTGATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATTTTTTTCGAGCGTATCGACCCAGTTTCAGAAGTCACAGTCTAGACAACTGCTTACAGTTTTACCTGGAAACCGAATCA GGGGGCTATTTTTGATGGCTGAGTAATCACCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTCCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTTTACTACCAGATATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCCCTACTTTTAGGATGATATACCAGGTATTTTAATTACTTCGAAACAGCTTTTCTTGAGTCCAGTTCTTGCACGAGTGTGGCCTTGGACTGTTGCTGTGATTGAGAATTGGTCCTTGATCAGTTGATCCTTCCCTGCAGCGAAAAGTTTTTTTAAAAAAAAAAAAAAAAAAAAAGAAA] [+] EMBL BE230022 [ ATGGGAGAAAGTGCTTGAAGAATACAGTCGGTCCAGTTTCTGTCCACAGATAATCTCCTTCGAGCGTATCGACCCAGTTTCAGAAGTCACAGTCTAGACAACTGCTTACAGTTCTACCTGGAAACCGAATCACGGGGGCTATTTTTGATGGCTGAGTAATCACCTTTTTAGGTAGAATACAGACAGCTTGATGACCCACAGCTGAATTTTCTGTCATGTACTGTCGATATGGCTTTCACCCCTATATGCCTTGTCCTTAACTTTACAGTTCTACTACCAGATATCATACGCA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10839#0 TCCGCATTTCTCGCCTCGCCCACCCCCACACGCAACCGACCGACCCATCCTTACCACCCA 60 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CCCCACCCCACGCTCCCCTCCTCCGCGGGCTTGGCATTTCAACAAACACCTCGCGTGCAC 120 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CTCCCTCGCCGCCACCTCCTCGCCGCGCGCCGCCTCCCACTCCTCCTCCTCCCGGCCTCC 180 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GCGCGCCACCGGCCTCGGCAGCTCCCCGTGGGACGCGGGGGAACAAGACGAGCCCGAGCA 240 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GGAGCAGGAGCAACATGGACTGGGACAGCGCCACCCCCGGCTTCCGCGCGCGGGTGAAGG 300 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACCTCACCGGGCCACTCCCGGCCGAGCGGGAAGGGGTTGACGTCAAGGAGGAGAGGCTCC 360 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ATGAAGCGGTGGAGCTCGCCGTCGACTTCCACTCGGCGCTCGCGTACCACGTCGTGGGAT 420 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACGTGCGCGCCGCGCTCGGGGAGGACGAGTTGGCGCTCGATTCCCTTCGCCTCGCCAGGG 480 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ATCTCGCCCCCAGCGACCTCGGCATCGCCTTCACCCTCGCCAAGAGGTACGCCGCTAGGG 540 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AGCAGTTTGATCTGGCGGTGGAAGCGTGCCAACGCGCGCTCGGCCGAGGTGACGCTGATC 600 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TCGTCGACCCGCAGCTAAACGCCGTCTTCGAGTCCCGCCACTTGGAGCCGAGCAAAGAGG 660 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CGCGGATCTCCACTGCTAAGAATGGCCTCAAGCAACTCCTTATCTCCGCCTTGTCGAAGA 720 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TCGCCATCCCGATGGCCCGAGATCGTTGGAACGGCATGAGCGAGGAGACGCGCCGCAGTT 780 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TCCTGACAGTGGGTATTGACGAGATGGTAGCATACTGCTGTGCTAAGCCGTCTGACGAGT 840 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GTCAGATGAGTGCTCTCACTGGTGCACTGGACTTTGTGAAGGACAATAGAGAATGGATCT 900 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GCTGGCTGTGCCCTCAATGCGAAATGACTTTCCTCACTGCGAAGACCTTCCAGTTGCATG 960 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTGAGGATGATGAGTTCTCCCGGTCCCAGGAGTTCAAAGAATCGCTGTTGTTTGTGCCGG 1020 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AGAGGATATCTGATGAACAGACAGAGTTTATTAAGTGTTGGACTCTGCCATCTGATGTCA 1080 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ATCCTACTGAAGAAGCTGAGGGAGAAAAGATCTTGACCAAGATCAAGAGTACATTTCAGT 1140 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACCTCAAGGATAAGAAGGCTCTATCTGTTGATCTTTTTGACAACCTGATCAAATTCACGA 1200 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AAAACCGGATTGAAGAAGCTGTTACCCAAAATTATAGCTGCATTACTTCTCTGGACCCTG 1260 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GAGGGCTTCTGTTGCTGGGGACTTATCTGGATTTGCTTCGATTGAGGGTTGGTGATGCCG 1320 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AGCAGGATAGCCGTGATAATTTTGGTGGGGGAGTTGTTCAAGACGCTTGCGTTCTATCTA 1380 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TAGGTACTGATGAGAATGTGCTAAGAATTACTGATGGTTCTAGCAATCAAGATGCTCTGT 1440 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTAGCTGGCTATCTAGACCTTCAAGACAAGACCCATTTACATCATGGGACAACATGAGGC 1500 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AAGCCTGTCTAGATAAGGGAACTCATGCCCTTGGAAAGTTGAATGGAAGGGCCGCTGCAT 1560 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TGATAGAGAAAGTTAATCTGAAACGTGGCTTAACAGCGACGCAGACTTATGAAGCTTATT 1620 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTGGTGAAAAGGCTAAAATAGATATTGAGATCATGCAATTGGTTGCCGAAGTTGATAATT 1680 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TGAAGAAAAACCTCTTGGAAGTCTGCACTTATGATTATCGTGAAATCATTTTACCAGCTA 1740 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TGAAAGATTTCCTATGGGCTAAACTGTGTAATGTTCCACCTAAAGGGGTCTCAAGTTCTG 1800 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AGGGTGATAAAGTTTCTGAGGCAAGTATTGAAAACAGAGATCCAGTTCAAGAAGATATTA 1860 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ATGCAGGTCTCAATATCATCAGTCCTGAATCAGTCTTACAAGAAGATGATGGAAAAGCTA 1920 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CCGAGGACAATCTACAGGGTGGAGATTCAACTGTGCCCGACTGTAATGGTGTCGAAGAGC 1980 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTCCAGGCGATAGTAAAGTACTGCAATCTGGCAAGAAGCTTGAGTTGCCTCCAAGAGCTA 2040 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACACAAGCACCTTGGGAAGCTCAGAGACTCCTATGGAAAAGGAAAACAAGACTTCCTCAC 2100 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CATCTGATTACTCTGGCTCAAATGAAGGGAGTGCAAACATTTCGAGCAATGGAGTAACTG 2160 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GAACTGCCTATCCAAATAGTGAAAATGAACTAAAGTCCTTGTTTTCGGCTCTCCTGTCAT 2220 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TGTGGCACTTAAGGCCCTTCACTGATAAGTTCATGAAGAAAGCACCGCTTTATCCTCATT 2280 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTGGAGTTTCTGGAAAAGATCGGAATTGTATGCTGTGCTACTTGTTCCATAGTTTCAATG 2340 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CTTTTAGTGATAAGAGTGACTCTACAGCAACTTATCGACTGAGCTGTTTGAGACCTTCTT 2400 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TTATCAAGATTTTAGAAGAGGCGAATGTTTCGTTGAAGGAGGAAACAAATTTGGCAGTGA 2460 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 AATATATAGAAATAGTGCTTAACATGGTGCATACATCAGAAACTGCTAAATGTATCAGCA 2520 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACAACAGTAAAAACATTCTGTACAAAACAACACTCTTCTCCAGTTGTCCTGATCATAGAT 2580 consensus_10839#1 -----------------------------------------------------------T 1 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 GCCTCTCGCATGAACTTTTTGGGATGCACAAGAATGCAACAGAGAGCACATATTTTCTCA 2640 consensus_10839#1 GCCTCTCGCATGAACTTTTTGGGATGCCCAAGAATGCAACAGAGAGCACATATTT-CTCA 60 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 ACGTTGGTGCAAGTGAACTGCGG-AATATTGAGATGAACACTTTTGCCGATGTCATAAAA 2699 consensus_10839#1 ACGTTGGTGCAAGTGANCTGCGGGAATATTGAGATGAACACTTTTGCCGATGTCATAAAA 120 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCACAATCATCCGCCATGT 2759 consensus_10839#1 TCTGTCGACAAGAAGTTTCACTGTAATACTGAGAGTAATGCTCCCAATCATCCGCCACGT 180 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTA 2819 consensus_10839#1 TACTTCACAACTGCTTTTGGCTATCCAAGTGAGAATGATAGCCATCTTGTCTCTGGATTA 240 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 CTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAA 2879 consensus_10839#1 CTGGTCAGCATAGCTGCCCCCTTGGACATTAATCCTGTTTATGAAGGCCTGCACTCAGAA 300 consensus_10839#2 ------------------------------------------------------------ consensus_10839#0 TGCAAGTATACTATGGTTTCTGCG---GTATTTCGTGCTGAGGGGCGAGATATCTGCCTT 2936 consensus_10839#1 TGCAAGTATACTATGGTTTTTGCGCAGGTATTTCGTGCTGAGGGGCGAGATATCTGCCTT 360 consensus_10839#2 ----------------------------------------------------------AG 2 consensus_10839#0 GCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTT 2996 consensus_10839#1 GCTCGAGAAGAGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTT 420 consensus_10839#2 ACGAGACAAGGGGAGAAGTGGCTTGTATATGATAACTCACTCAGGGAAGTCAAGGAATTT 62 * ** *** ************************************************* consensus_10839#0 GATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATC 3056 consensus_10839#1 GATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATT 480 consensus_10839#2 GATTCATGGGAGAAAGTGCTTGAAGAATACAGTCGTTCCAGTTTCTGTCCACAGATAATT 122 *********************************************************** consensus_10839#0 TTCTTCGAGCGTATCGACCCAGTTTCAGAGGCCGCGGGCACAGAAGTCACAGTCTAGACA 3116 consensus_10839#1 TTTTTCGAGCGTATCGACCCAGTTTCAGA---------------AGTCCCAGTCTAGACA 525 consensus_10839#2 TTTTTCGAGCGTATCGACCCAGTTTCAGA---------------AGTCACAGTCTAGACA 167 ** ************************** **** *********** consensus_10839#0 ACTGCTTACAGTTCTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATC 3176 consensus_10839#1 ACTGCTTACAGTTTTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATC 585 consensus_10839#2 ACTGCTTACAGTTTTACCTGGAAACCGAATCAGGGGGCTATTTTTGATGGCTGAGTAATC 227 ************* ********************************************** consensus_10839#0 ACCTTTTTAGTTAGAATACAGATAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTAC 3236 consensus_10839#1 CCCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTAC 645 consensus_10839#2 ACCTTTTTAGTTAGAATACAGACAGCTTGATGACGCAAAGCTGAATTTTCTGTCATGTAC 287 ********************* ************************************* consensus_10839#0 TGTCGATATGGCTTTCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTCTACTACCAGA 3296 consensus_10839#1 TGTCGATATGGCTTTCGTCTCTATAAAAAAAAAAAAAAAAAAAAA--------------- 690 consensus_10839#2 TGTCGATATGGCTTCCGTCTCTATATGCCTTGTCCTTAGCTTTACAGTTTTACTACCAGA 347 ************** ********** * * consensus_10839#0 TATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCACTACTTTTAGGATGATATA 3356 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 TATCATACGCAGCGCAGGGTAGTAAGTATTCCAGTTATGCCCTACTTTTAGGATGATATA 407 consensus_10839#0 CCAGGTATCTTAATTACTTCGAAACA---------------------------------- 3382 consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 CCAGGTATTTTAATTACTTCGAAACAGCTTTTCTTGAGTCCAGTTCTTGCACGAGTGTGG 467 consensus_10839#0 ------------------------------------------------------------ consensus_10839#1 ------------------------------------------------------------ consensus_10839#2 CCTTGGACTGTTGCTGTGATTGAGAATTGGTCCTTGATCAGTTGATCCTTCCCTGCAGCG 527 consensus_10839#0 ------------------------------------- consensus_10839#1 ------------------------------------- consensus_10839#2 AAAAGTTTTTTTAAAAAAAAAAAAAAAAAAAAAGAAA 564 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||