These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1896 fasta sequence [AGAGTGCTCGTCGTCGATCGCCCAAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT-GGGGTTG-TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG-GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAAATGCAAA] [+] EMBL AK103582 [AGAGTGCTCGTCGTCGATCGCCCAAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAA ] [+] EMBL CB620253 [ CGCCCTAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAAATTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAAT ] [+] EMBL CB640781 [ aaGTCCGGGACAACCCAAAA GCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATTGGGGGTTGTTTGGACTTATCACTCCCTGGAATTATCCTCTG ] [+] EMBL CB663530 [ AAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAA ] [+] EMBL CB632316 [ ACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACCAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGT ] [-] EMBL CB663531 [ TGCATGGCAAAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAAATGCAAA] [-] EMBL CB620254 [ CATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTATGGGGTATCAGACTATCATTCGCTTTGTCGAGCAACTtaaaagga ] [-] EMBL CB632317 [ AGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||