cluster # 109

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Oryza sativa
cluster # 109 cluster # 109 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_109#0 length = 1025 sequences # 2

consensusID : consensus_109#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1025
fasta sequence

                              [TCAAAATACTCAAACTAAGCTAATCCATCTCCCTCCAAGACCAAGAATTCCATTCCACTAGTTAATCTCAATCTCCTCTTTCGAGGAATCTCATCAACAAAAACAAAAAAAAAAAACATTGCCGCATCCGGAGTAGCTAGCGCGCTAATTACATTTACATGGCGATCCAATCCAATCCAGATGCCGCATCACCTTCCATGGATCTACAGACTACAGGTAGGAGGAGGAGGAGGAAGAAGAGGGTCGGCCAGCGGCGGCGATGGACTTGGCGTCGGAGGGCAGCAGGACGAGGAGGAGGAGCACGGCGAAGATGGCGACGGGCACGAGCAGCAGCATCGGCGGCGGCGGCGGCAGCGGCGGCAGCAGCAGCGGCAGCACCAGCAGCGTCGCCGTCACCACCCCGAGCAGCACCGCCGCCTCCACCCCCAAGTACCCTCCTCCTCCTCCGCCTACTTCCACCGCCGCCGCCGTCTCCTCCACCACTCTCCGCTTCACTCCCACCTGTCCGTACAATCTCCCTCCCGTCGCCGCCGCCGTGGACCTGTGCCCGGCCATGGCGTCCTCCTCGTAACGCAGCAAGATGACTCCTCGCATCAAGAAGCAGATGCAGAAGCGGAAGCAATGGAGGAGAAGAAGACGAGGAGGAGGAGGAGGAGCTGAAGAAATAGGCGGCGAAGAGAAGAAGCGTCCGTACGGGTGCCACTTGGCGGGAAGCACGCACGCGTGTGAATGCCACGTGGGACGGCCACGTCGGACAGGGACAGGGATGATCCGACGGCTGGGATTGAGCGGCGAGGGTGAAGCCGGCGATGGGATTGGAAACCGGGGATACAAAACCGGTGGCGGGATAGCGGATTGGCCGCAGGATTGGGAAATAGAAAGGCGACGGGTGGATGGTATTTTGGGAGGTGCATGCATCTGTCCATCAACATCTTCATCGGCTCATCACTATCGGCCTGCTTTAATTCCTAACTTTTTCTTTAAATTTTCAATTTTTTCATCACATTAAAACTTTTCTATACACA]

[+] EMBL AK061571             [TCAAAATACTCAAACTAAGCTAATCCATCTCCCTCCAAGACCAAGAATTCCATTCCACTAGTTAATCTCAATCTCCTCTTTCGAGGAATCTCATCAACAAAAACAAAAAAAAAAAACATTGCCGCATCCGGAGTAGCTAGCGCGCTAATTACATTTACATGGCGATCCAATCCAATCCAGATGCCGCATCACCTTCCATGGATCTACAGACTACAGGTAGGAGGAGGAGGAGGAAGAAGAGGGTCGGCCAGCGGCGGCGATGGACTTGGCGTCGGAGGGCAGCAGGACGAGGAGGAGGAGCACGGCGAAGATGGCGACGGGCACGAGCAGCAGCATCGGCGGCGGCGGCGGCAGCGGCGGCAGCAGCAGCGGCAGCACCAGCAGCGTCGCCGTCACCACCCCGAGCAGCACCGCCGCCTCCACCCCCAAGTACCCTCCTCCTCCTCCGCCTACTTCCACCGCCGCCGCCGTCTCCTCCACCACTCTCCGCTTCACTCCCACCTGTCCGTACAATCTCCCTCCCGTCGCCGCCGCCGTGGACCTGTGCCCGGCCATGGCGTCCTCCTCGTAACGCAGCAAGATGACTCCTCGCATCAAGAAGCAGATGCAGAAGCGGAAGCAATGGAGGAGAAGAAGACGAGGAGGAGGAGGAGGAGCTGAAGAAATAGGCGGCGAAGAGAAGAAGCGTCCGTACGGGTGCCACTTGGCGGGAAGCACGCACGCGTGTGAATGCCACGTGGGACGGCCACGTCGGACAGGGACAGGGATGATCCGACGGCTGGGATTGAGCGGCGAGGGTGAAGCCGGCGATGGGATTGGAAACCGGGGATACAAAACCGGTGGCGGGATAGCGGATTGGCCGCAGGATTGGGAAATAGAAAGGCGACGGGTGGATGGTATTTTGGGAGGTGCATGCATCTGTCCATCAACATCTTCATCGGCTCATCACTATCGGCCTGCTTTAATTCCTAACTTTTTCTTTAAATTTTCAATTTTTTCATCACATTAAAACTTTTCTATACACA]
[-] EMBL AK070327             [                                                                         TCCTCTTTCGAGGAATCTCATCAACAAAAAC  AAAAAAAAAACATTGCCGCATCCGGAGTAGCTAGCGCGCTAATTACATTTACATGGCGATCCAATCCAATCCAGATGCCGCATCACCTTCCATGGATCTACAGACTACAGGTAGGAGGAGGAGGAGGAAGAAGAGGGTCGGCCAGCGGCGGCGATGGACTTGGCGTCGGAGGGCAGCAGGACGAGGAGGAGGAGCACGGCGAAGATGGCGACGGGCACGAGCAGCAGCATCGGCGGCGGCGGCGGCAGCGGCGGCAGCAGCAGCGGCAGCACCAGCAGCGTCGCCGTCACCACCCCGAGCAGCACCGCCGCCTCCACCCCCAAGTACCCTCCTCCTCCTCCGCCTACTTCCACCGCCGCCGCCGTCTCCTCCACCACTCTCCGCTTCACTCCCACCTGTCCGTACAATCTCCCTCCCGTCGCCGCCGCCGTGGACCTGTGCCCGGCCATGGCGTCCTCCTCGTAACGCAGCAAGATGACTCCTCGCATCAAGAAGCAGATGCAGAAGCG                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_109#0
TCAAAATACTCAAACTAAGCTAATCCATCTCCCTCCAAGACCAAGAATTCCATTCCACTA
GTTAATCTCAATCTCCTCTTTCGAGGAATCTCATCAACAAAAACAAAAAAAAAAAACATT
GCCGCATCCGGAGTAGCTAGCGCGCTAATTACATTTACATGGCGATCCAATCCAATCCAG
ATGCCGCATCACCTTCCATGGATCTACAGACTACAGGTAGGAGGAGGAGGAGGAAGAAGA
GGGTCGGCCAGCGGCGGCGATGGACTTGGCGTCGGAGGGCAGCAGGACGAGGAGGAGGAG
CACGGCGAAGATGGCGACGGGCACGAGCAGCAGCATCGGCGGCGGCGGCGGCAGCGGCGG
CAGCAGCAGCGGCAGCACCAGCAGCGTCGCCGTCACCACCCCGAGCAGCACCGCCGCCTC
CACCCCCAAGTACCCTCCTCCTCCTCCGCCTACTTCCACCGCCGCCGCCGTCTCCTCCAC
CACTCTCCGCTTCACTCCCACCTGTCCGTACAATCTCCCTCCCGTCGCCGCCGCCGTGGA
CCTGTGCCCGGCCATGGCGTCCTCCTCGTAACGCAGCAAGATGACTCCTCGCATCAAGAA
GCAGATGCAGAAGCGGAAGCAATGGAGGAGAAGAAGACGAGGAGGAGGAGGAGGAGCTGA
AGAAATAGGCGGCGAAGAGAAGAAGCGTCCGTACGGGTGCCACTTGGCGGGAAGCACGCA
CGCGTGTGAATGCCACGTGGGACGGCCACGTCGGACAGGGACAGGGATGATCCGACGGCT
GGGATTGAGCGGCGAGGGTGAAGCCGGCGATGGGATTGGAAACCGGGGATACAAAACCGG
TGGCGGGATAGCGGATTGGCCGCAGGATTGGGAAATAGAAAGGCGACGGGTGGATGGTAT
TTTGGGAGGTGCATGCATCTGTCCATCAACATCTTCATCGGCTCATCACTATCGGCCTGC
TTTAATTCCTAACTTTTTCTTTAAATTTTCAATTTTTTCATCACATTAAAACTTTTCTAT
ACACA

clustalw multiple alignements is not computed in this case