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Oryza sativa
cluster # 10940 cluster # 10940       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10940#0 length = 1213 sequences # 3  
consensus_10940#1 length = 1020 sequences # 4  
consensus_10940#2 length = 356 sequences # 1  

consensusID : consensus_10940#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1213
fasta sequence
                              [GCAGCCCTATGGTTGAAGCTCAATGCTTTGTGCAACTAGGATTTCCTGTGGTTTTAAAGAGCACAACAATGACAGAGGATATTCACTATGTTGGGTTTCTAAGTAAACTTCTGGAGACGAAAATCATGCAAGTGCTTCGTTTCAAATATGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCT-GGAGGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAGGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGNGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTGTGGGAAAACCCCAGAATGATTAAAAGAATATGGGAGTAAGGATGCAGACATTTGTATGCACTGTAAAAAAAGA]

[+] EMBL OSC109451            [GCAGCCCTATGGTTGAAGCTCAATGCTTTGTGCAACTAGGATTTCCTGTGGTTTTAAAGAGCACAACAATGACAGAGGATATTCACTATGTTGGGTTTCTAAGTAAACTTCTGGAGACGAAAATCATGCAAGTGCTTCGTTTCAAATATGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGGAGGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB667435             [                                                                                                                                 AAGTGCTTCGTTTCAAATATGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCT GGAAGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGNGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCA                                                                                                                                                                                                                                                                              ]
[-] EMBL CB667436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTGTGGGAAAACCCCAGAATGATTAAAAGAATATGGGAGTAAGGATGCAGACATTTGTATGCACTGTAAAAAAAGA]


>consensus_10940#0 GCAGCCCTATGGTTGAAGCTCAATGCTTTGTGCAACTAGGATTTCCTGTGGTTTTAAAGA GCACAACAATGACAGAGGATATTCACTATGTTGGGTTTCTAAGTAAACTTCTGGAGACGA AAATCATGCAAGTGCTTCGTTTCAAATATGGACAGGTTTACTCAGTCAATGTAGGTGTCT TCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATT TTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAGGAGATATCAT TTCTACAAAATGAAGGCCCTTCTGAGGAAGACGTATTAACTATCCTTGAAATTGAACAAA GAGCTCATGAAAATGGATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCT ATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGAC GTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTG TGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCT GGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGA TTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTA GCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAAT GGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTG GTTTCCTCCTGNGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGA AGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTG TAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATG TATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTG CATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTG TGGGAAAACCCCAGAATGATTAAAAGAATATGGGAGTAAGGATGCAGACATTTGTATGCA CTGTAAAAAAAGA



consensusID : consensus_10940#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1020
fasta sequence
                              [GATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGTTTAGTGAAGTTTATCTTTATCAAATTCGTGCCAATATAGTGCATAGTGTTCTAATCTTTGAGAAACCACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGGGATCCAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAAT-GGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTGTGGGAAAACCCAGAATGATAAAAGAATATAGGAGTAAGGATGCAGACAAAAAAAA]

[+] EMBL CF312414             [GATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGTTTAGTGAAGTTTATCTTTATCAAATTCGTGCCAATATAGTGCATAGTGTTCTAATCTTTGAGAAACCACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGGGATCCAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAATGGGATCTGTCAAGACAATCATCTGCTTGACTCCAG                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK058447             [                                                                                                                                                                                                                                                                                                                                                                                   TCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTATGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAAT GGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTGTGGGAAAACCCAGAATGATAAAAGAATATAGGAGTAAGGATGCAGAC        ]
[+] EMBL CA998882             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCAAAAAT GGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCA                                                                                                                                                         ]
[+] EMBL AU166308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGATCCAAAAAT GGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGTGTTTGTGGGAAAACCCAGAATGATAAAAGAATATAGGAGTAAGGATGCAAAAAAAAAAAA]


>consensus_10940#1 GATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAA AATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCAT GAAAATGGATTACAGGTTTAGTGAAGTTTATCTTTATCAAATTCGTGCCAATATAGTGCA TAGTGTTCTAATCTTTGAGAAACCACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCG GAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGGGATCCAAGATGA GGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCCTTGCAAAG AGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCGAAGTCATC CTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGCAGAGACGC AAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGGAGATACTC ACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGTAAGATCCA AAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGACGACAAGA TTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGATTGTCCGTC ACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCGTGCGCTAA GCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTAACAGCCAC TGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGGAAACGGCA GGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTTGGATGTGT GTTTGTGGGAAAACCCAGAATGATAAAAGAATATAGGAGTAAGGATGCAGACAAAAAAAA



consensusID : consensus_10940#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 356
fasta sequence
                              [ACGAGNACAAGGGGGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGNCTNAAAGGT]

[+] EMBL CA764062             [ACGAGNACAAGGGGGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATGGATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGNCTNAAAGGT]


>consensus_10940#2 ACGAGNACAAGGGGGGACAGGTTTACTCAGTCAATGTAGGTGTCTTCTTAGGTGGCAACA AACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATTTTTCATGCGATCCAG ACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCATTTCTACAAAATGAAG GCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAAGAGCTCATGAAAATG GATTACAGGAAAATTACTACTGGCTGGATCGAGTTCTGCGGAGCTATCAATCAAGGGTTT ATTCTGGAGATGTTGGATCCACCTTTGAGATCCAAGATGAGGGACGNCTNAAAGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10940#0      GCAGCCCTATGGTTGAAGCTCAATGCTTTGTGCAACTAGGATTTCCTGTGGTTTTAAAGA 60
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      ------------------------------------------------------------
                                                                                   

consensus_10940#0      GCACAACAATGACAGAGGATATTCACTATGTTGGGTTTCTAAGTAAACTTCTGGAGACGA 120
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      ------------------------------------------------------------
                                                                                   

consensus_10940#0      AAATCATGCAAGTGCTTCGTTTCAAATATGGACAGGTTTACTCAGTCAATGTAGGTGTCT 180
consensus_10940#2      ---------------ACGAGNACAAGGGGGGACAGGTTTACTCAGTCAATGTAGGTGTCT 45
consensus_10940#1      ------------------------------------------------------------
                                                                                   

consensus_10940#0      TCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATT 240
consensus_10940#2      TCTTAGGTGGCAACAAACCTTCAAGAAGTGGAGATATTCGTGGAGATATAAGTGTGAATT 105
consensus_10940#1      ------------------------------------------------------------
                                                                                   

consensus_10940#0      TTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAGGAGATATCAT 300
consensus_10940#2      TTTCATGCGATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCAT 165
consensus_10940#1      --------GATCCAGACATGTCATCCAAACTTGTTGACTTTGTGCTGGAAGAGATATCAT 52
                               ***************************************** **********

consensus_10940#0      TTCTACAAAATGAAGGCCCTTCTGAGGAAGACGTATTAACTATCCTTGAAATTGAACAAA 360
consensus_10940#2      TTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAA 225
consensus_10940#1      TTCTACAAAATGAAGGCCCTTCTGAAGAAGACGTATTAACTATCCTTGAAATTGAACAAA 112
                       ************************* **********************************

consensus_10940#0      GAGCTCATGAAAATGGATTACAGG------------------------------------ 384
consensus_10940#2      GAGCTCATGAAAATGGATTACAGG------------------------------------ 249
consensus_10940#1      GAGCTCATGAAAATGGATTACAGGTTTAGTGAAGTTTATCTTTATCAAATTCGTGCCAAT 172
                       ************************                                    

consensus_10940#0      -------------------------------------AAAATTACTACTGGCTGGATCGA 407
consensus_10940#2      -------------------------------------AAAATTACTACTGGCTGGATCGA 272
consensus_10940#1      ATAGTGCATAGTGTTCTAATCTTTGAGAAACCACAGGAAAATTACTACTGGCTGGATCGA 232
                                                            ***********************

consensus_10940#0      GTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATC 467
consensus_10940#2      GTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGAGATC 332
consensus_10940#1      GTTCTGCGGAGCTATCAATCAAGGGTTTATTCTGGAGATGTTGGATCCACCTTTGGGATC 292
                       ******************************************************* ****

consensus_10940#0      CAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCC 527
consensus_10940#2      CAAGATGAGGGACGNCTNAAAGGT------------------------------------ 356
consensus_10940#1      CAAGATGAGGGACGTCTAAAGGTTAGAGAGGCTTTGACACCACAATCGATGCAAATGGCC 352
                       ************** ** ** * *                                    

consensus_10940#0      TTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCG 587
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      TTGCAAAGAGTTGTGCCTTTCCCTTGCAGAAAACAGTTCACTGTAGTTATTCTTATGCCG 412
                                                                                   

consensus_10940#0      AAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGC 647
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      AAGTCATCCTGCTGGAACTCGTTTAAGGCACTGCTTACTTGGAGCCCTGGTGGATTTAGC 472
                                                                                   

consensus_10940#0      AGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGG 707
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      AGAGACGCAAAGATTTTGGCTGGCATGGCTGGCGCAATAGTGTTAGCGGTCAGTTTGTGG 532
                                                                                   

consensus_10940#0      AGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGT 767
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      AGATACTCACGTAGCACATTGAGATCATAGCACGTCTATCACGCTCTCGACTGTTTTAGT 592
                                                                                   

consensus_10940#0      AAGATCCAAAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGA 827
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      AAGATCCAAAAATGGATCTGTCAAGACAATCATCTGCTTGACTCCAGGTACATGAGCTGA 652
                                                                                   

consensus_10940#0      CGACAAGATTTTGGTTTCCTCCTGNGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGAT 887
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      CGACAAGATTTTGGTTTCCTCCTGGGATGCTGCTTCCTATCTGAGAGTGGATGTGGTGAT 712
                                                                                   

consensus_10940#0      TGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCG 947
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      TGTCCGTCACAGAAGAAAGTATACAGAAATTGGTAGCTAACAGATTCATTGCCGCATGCG 772
                                                                                   

consensus_10940#0      TGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTA 1007
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      TGCGCTAAGCCTGTAACACAACACCATACGATTCTTTTGTCGCAGCATACGTGCCCCGTA 832
                                                                                   

consensus_10940#0      ACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGG 1067
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      ACAGCCACTGATGTATATTGACACCTCCCATTTCATTTGATCCTCTAGACTGCAAGTAGG 892
                                                                                   

consensus_10940#0      AAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTT 1127
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      AAACGGCAGGTTGCATGCTATTAGCTGAAGTAGTAGCGGTTTTGTTTCTTGGTGAGCTTT 952
                                                                                   

consensus_10940#0      GGATGTGTGTTTGTGGGAAAACCCCAGAATGATTAAAAGAATATGGGAGTAAGGATGCAG 1187
consensus_10940#2      ------------------------------------------------------------
consensus_10940#1      GGATGTGTGTTTGTGGGAAAACCCAGAATGATAAAAGAATATAGGAGTAAGGATGCAGAC 1012
                                                                                   

consensus_10940#0      ACATTTGTATGCACTGTAAAAAAAGA 1213
consensus_10940#2      --------------------------
consensus_10940#1      AAAAAAAA------------------ 1020
                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)