These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 584 fasta sequence [GATACGCTACGTAACGACATGACAGTG--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC--AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAACCTGACAGCGTCTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACG] [+] EMBL CF291484 [GATACGCTACGTAACGACATGACAGTG TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACA AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAACCTGACAGCGTCTGGATGATGGTGTTGTGC ] [+] EMBL CF333673 [ ACGGCATGATAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTCTTTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAAATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGC ] [+] EMBL CF335630 [ t TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATTCTCCAC AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAACCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATGAAATCGATCACACCCTCAACCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAG ] [+] EMBL CF302286 [ TTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTTTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAAGAAGAACCCGGAAGAGAACTTTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCA ] [+] EMBL CF302368 [ TTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCGTGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTCTTTCTCCTCCCCCCAATTAATTAACATCTTATACATGCATACTCCAC AAAAAAA ] [+] EMBL CF301447 [ TTTTTTTTTTTTACCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAATACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTCTTTTTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTC C AAAAAAAAAAGAAGAAACAGGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGC ] [+] EMBL CF300777 [ TTTTTTAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC AAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGGGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACG] [+] EMBL CF300227 [ TTTTAGCTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCCTGCCGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCCAC AAAAAAAAAAGAAGAAACCGGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||