cluster # 10952

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Oryza sativa
cluster # 10952 cluster # 10952 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10952#0 length = 1704 sequences # 8
consensusID : consensus_10952#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1704
fasta sequence
                              [CGCATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGTCTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCCGCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCGGAGTAAATGAGAAGAATTACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGATGCCA-TTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACAAAACCATTGCCGACATGAAGATACATGCTGTGTTGTGATAATCCG-AGCTTATTTTTGGCCTGTTTGAATTTTGTTATTTTGTTGTGCGACACATGGACTCCCATGAGTTGGGGTGAATGAACAAGTAGTAACACACTGCTTGCACACAAACAACAGACCTGATTTCCTACACTTGGTATGGTGCATTAACGTACACCATGGAATGGATCGATATCTCCAAAAAAA]

[+] EMBL AK106824             [CGCATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGTCTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCCGCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCGGAGTAAATGAGAAGAATTACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGATGCCA TTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACAAAACCATTGCCGACATGAAGATACATGCTGTGTTGTGATAATCCG AGCTTATTTTTGGCCTGTTT                                                                                                                                                                ]
[+] EMBL CB646586             [   ATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGTCTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCCGCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCCGAGTAAATGAGAAGAATTAC ACCCCAGCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB646813             [   ATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGTCTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCCGCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTGATATCTGCTCCATCCGCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB646541             [   ATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGTCTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCCGCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCGCCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTAGGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCGTTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCACGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAATTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTAAGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAAAGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAAGAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTGGTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB646542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGATGCCA TTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACAAAACCATTGCCGACATGAAGATACATGCTGTGTTGTGATAATCCGAAGCTTA                                                                                                                                                                              ]
[-] EMBL CB646814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCCTTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATGCTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGATGCCA TTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACAAAACCATTGCCGACATGAAGATACAGGCTGTGTTGTGATAATCCG AGCTTATTTTTGGC                                                                                                                                                                      ]
[-] EMBL CB646587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGACAACTGTCCATGTTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGACGGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGGTCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACGTCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAGCAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGGACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTGGAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCTACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGATAAGCCCTGATGCCA TTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACGGAACAAAACCATTGCCGACATGAAGATACATGCGGTGTTGTGATAATCCG AGCTTATTTTTGGC                                                                                                                                                                      ]
[+] EMBL BM420268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGATCCCATTTGATAACACCAGATGCCCTAGTAATGTAGGAAGAGAAGGCT C AACTTGATGGCCCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACCAAACCCTTGCCGACATGAAGATACATGCTGTGTTGTGATAATCCG AGCTTATTTTTTGCCTGTTTGAATTTTGTTATTTTGTTGTGCGACACATGGACTCCCATGAGTTGGGGTGAATGAACAAGTAGTAACACACTGCTTGCACACAAACAACAGACCTGATTTCCTACACTTGGTATGGTGCATTAACGTACACCATGGAATGGATCGATATCTCCAAAAAAA]




>consensus_10952#0
CGCATCACGGAACCACGCCGCCGACGACGACCCCCGCCGCCGCACAACTCCGCTCGCCGT
CTCCTCCGCCCCCGCCTCCATTCCGCCGCCTTCCTTAGAGGAAGCCAAGTTTCCAGCGCC
GCCGCACCTGCATGGCGTCGCTCGCCGTCCCCCTCCGCGCTTCCGCCACCCCGGCCATCG
CCGGCACCGGCAGCGGCGGCGGATCACGCGCCGCCGACCCCGTCAAGGTGTCGTGCGTTA
GGAGCAAGGTTACCTGCGGTTTTCCTTCCGTTGGGGCTTCGTCTTCACTTGCTAGCAGCG
TTGAGCCGGTGAGAGCAACTGCTACACAAGCACCCCTTGCCACCCATCAATCTTCTAGCA
CGGAGAAGACAAAGGTTGGCATCAATGGATTTGGACGGATTGGGAGGTTGGTTCTACGAA
TTGCAACTAATAGAGATGACATTGAAGTTGTGGCTGTTAATGATCCTTTTATCGATGCTA
AGTACATGGCTTATATGTTCAAGTATGATTCGACACATGGTCCATTTAAAGGCACCATAA
AGGTTGTGGATGAGTCAACCTTGGAGATTAATGGGAAGAAAATTTCAGTTACAAGCAAAA
GAGATCCCTCAGATATTCCTTGGGGAAACTTTGGAGCTGAATATGTTGTTGAATCATCTG
GTGTTTTTACAACAACTGAGAAAGCATCAGCACACTTAAAGGGTGGTGCAAGGAAAGTAG
TGATATCTGCTCCATCCGCAGATGCTCCTATGTTTGTAGTCGGAGTAAATGAGAAGAATT
ACAACCCCAGCATGAATGTTGTCTCTAATGCAAGTTGTACTACCAACTGTCTTGCGCCCC
TTGCCAAGATTGTCCACGAGGAATTTGGCATAGCTGAGGGCCTCATGACAACTGTCCATG
CTACAACAGCCACCCAAAAGACTGTCGACGGTCCTTCAATGAAAGATTGGAGGGGAGGAC
GGGGTGCTAGTCAGAACATCATCCCTAGTTCTACTGGCGCAGCAAAGGCTGTTGGAAAGG
TCCTTCCAGCATTAAACGGGAAACTCACTGGTATGGCCTTCCGAGTTCCTACACCTAACG
TCTCTGTAGTTGACTTGACATGCCGTCTTGAGAAAAGTGCTTCTTATGAGGATGTGAAAG
CAGCTATCAAGGAAGCCTCAGAAGGTTCTTTGAAAGGTATTTTAGGCTACACAGATGAGG
ACGTCGTTTCGAATGATTTCATTGGTGACACCAGGTCTAGCATATTTGATGCCAAGGCTG
GAATTGGCTTAAGTTCTTCTTTCATGAAGCTCGTCTCTTGGTACGACAACGAGTGGGGCT
ACAGCAACCGGGTCTTGGATTTGATCGGGCACATGGCTCTCGTCAACGCTAAGCCCTGAT
GCCATTGATAACAGCAGATGCCCTAGTAATGTAGGAAGAGAAGGCTGCAAACTTGATGGC
CCCTTCTGTATCTCGGAATTATATTAAGCACACCGAACAAAACCATTGCCGACATGAAGA
TACATGCTGTGTTGTGATAATCCGAGCTTATTTTTGGCCTGTTTGAATTTTGTTATTTTG
TTGTGCGACACATGGACTCCCATGAGTTGGGGTGAATGAACAAGTAGTAACACACTGCTT
GCACACAAACAACAGACCTGATTTCCTACACTTGGTATGGTGCATTAACGTACACCATGG
AATGGATCGATATCTCCAAAAAAA
clustalw multiple alignements is not computed in this case