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Oryza sativa
cluster # 10967 cluster # 10967       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10967#0 length = 1707 sequences # 3  
consensus_10967#1 length = 833 sequences # 1  
consensus_10967#2 length = 679 sequences # 1  
consensus_10967#3 length = 206 sequences # 3  

consensusID : consensus_10967#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1707
fasta sequence
                              [AACTATCTCCCCCCCTTTCTCCTCCTCCGTAGCTTCCTTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAGCGGCGGAGGCGGCGCGCTCGCCTCGGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGCGAGCCAGAGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTCCAATGGACCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGACAGATTAATGGTTCAAGAAAAGATTCGGGGATGTTATCCACTCAGCCTAAGGGCATTGATAAATATGGTTCAGGATCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTCTTCGGGAAGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAGATTTCCTCAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGTTGCTCTCAGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAACACTGTTAGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCAGAAAGACAAGGAGACAGGACCAGCAC-AAACATTGAAAAATGTGGAAGTTGAACATTTTTCATCATTTGAGGCATCCAAAGATATGTTTGGAAGCAAACATGCTAAAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGGGCATCAAGCGACAAGTAGAAGCGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAAGTAAGTGTACTACACTAGAATAATTTGATTGTATTAAGTATATCATTGATGAAAGCAAAATATAATGATATACTGATTCTTCTATAGTAAGTATAGGGCTGCAAGAATAGCTGTAGGCTACTAGGCTCATGAGCTGCTCAATCAACTTGCTTTTTACCTCAACTCAAGATCAACTAAAATACAAATGAGATGAGTTTGGGTGTATTTTGTAGTTTGACTGTAAAAGATGAGTGTGAGTCGAGGTCATATCTTTCTAGCCTTGTTTCTGCAAACATGTAGATTTCAGATAACTAACTT]

[+] EMBL CB638960             [AACTATCTCCCCCCCTTTCTCCTCCTCCGTAGCTTCCTTCGCCTTCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK065173             [                                            TCCATTCCATGGCCACCACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAGCGGCGGAGGCGGCGCGCTCGCCTCGGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGCGAGCCAGAGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTCCAATGGACCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGACAGATTAATGGTTCAAGAAAAGATTCGGGGATGTTATCCACTCAGCCTAAGGGCATTGATAAATATGGTTCAGGATCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTCTTCGGGAAGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAGATTTCCTCAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGTTGCTCTCAGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAACACTGTTAGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCAGAAAGACAAGGAGACAGGACCAGCAC AAACATTGAAAAATGTGGAAGTTGAACATTTTTCATCATTTGAGGCATCCAAAGATATGTTTGGAAGCAAACATGCTAAAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGGGCATCAAGCGACAAGTAGAAGCGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAAGTAAGTGTACTACACTAGAATAATTTGATTGTATTAAGTATATCATTGATGAAAGCAAAATATAATGATATACTGATTCTTCTATAGTAAGTATAGGGCTGCAAGAATAGCTGTAGGCTACTAGGCTCATGAGCTGCTCAATCAACTTGCTTTTTACCTCAACTCAAGATCAACTAAAATACAAATGAGATGAGTTTGGGTGTATTTTGTAGTTTGACTGTAAAAGATGAGTGTGAGTCGAGGTCATATCTTTCTAGCCTTGTTTCTGCAAACATGTAGATTTCAGATAACTAACTT]
[+] EMBL CB673177             [                                                                                                                                                                                                                                                                                   TGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAGCGGCGGAGGCGGCGCGCTCGCCTCGGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGCGAGCCAGAGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTCCAATGGACCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGACAGATTAATGGTTCAAGAAAAGATTCGGGGATGTTATCCACTCAGCCTAAGGGCATTGATAAATATGGTTCAGGATCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTCTTCGGGAAGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAGATTTCCTCAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGTTGCTCTCAGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAACACTGTTAGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCAGAAAGACAAGGAGACAGGACCAGCACAAAACATTGAAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_10967#0 AACTATCTCCCCCCCTTTCTCCTCCTCCGTAGCTTCCTTCGCCTTCCATTCCATGGCCAC CACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCT CCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGA CCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGG AGGAGGGAAGGAGGTGGAGGAGAGGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCA CGTCAACGACGCCGCCAAGGGCGGCGGCCCGCGGGCGCCGCCCAGGAACAAGATGGCGCT CTACGAGCAGTTCACCGTGCCGTCCCACCGCTTCAGCGGCGGAGGCGGCGCGCTCGCCTC GGCTCGGGGCAGCCTGGCGCGCTCGACGTCGGCGGCGAGCCAGAGCCAGGTATATGGATG TGACATGCCTCTTTTTGAGCCGTTCAATGTGCCTTCCAATGGACCTGGCCAGTCTGTTGA AAAGATGAATTCAAATTCTGTCAACAGACAGATTAATGGTTCAAGAAAAGATTCGGGGAT GTTATCCACTCAGCCTAAGGGCATTGATAAATATGGTTCAGGATCAAGGGCTGAGTGTGC CCCACAGCAAAGGGTGGAAAAGGGCATAAAGAGTTCTTCGGGAAGGAAATTGGCTGATGA TGATGAATTCATTGTACCTTCTGTTTTCAGTGCCAGATTTCCTCAATATTCTACTAAAGA GCGTGCGGGGGTTCAAGAGGAATCAACACCCCTTGTTGCTCTCAGTCCGCACAAAAGCCC TCCAGCAGTGTCCAAATCACCGACAAAGTGTTATAACACTGTTAGTAAGAACTTGGAGAG AATCAATGTTTCTGATGTGAAATCAAGGGGTTCTCAGAAAGACAAGGAGACAGGACCAGC ACAAACATTGAAAAATGTGGAAGTTGAACATTTTTCATCATTTGAGGCATCCAAAGATAT GTTTGGAAGCAAACATGCTAAAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGA GCCACATTTGGAAAACAGCGGGCATCAAGCGACAAGTAGAAGCGGGAGTTCCGTGAAATT TCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAA TACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAA AAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGA GTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCA TTTTTGGAAAGCAAGGCGGGCTATCATAAAGTAAGTGTACTACACTAGAATAATTTGATT GTATTAAGTATATCATTGATGAAAGCAAAATATAATGATATACTGATTCTTCTATAGTAA GTATAGGGCTGCAAGAATAGCTGTAGGCTACTAGGCTCATGAGCTGCTCAATCAACTTGC TTTTTACCTCAACTCAAGATCAACTAAAATACAAATGAGATGAGTTTGGGTGTATTTTGT AGTTTGACTGTAAAAGATGAGTGTGAGTCGAGGTCATATCTTTCTAGCCTTGTTTCTGCA AACATGTAGATTTCAGATAACTAACTT



consensusID : consensus_10967#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 833
fasta sequence
                              [TCCCGTAGCTTCCATTTCCATGGCCACAAAAACCGGCGACCTCCTCCACCCCGCCATGGCCTGACGCCCCCGAGAAGCTGCTGCGGCGGGAGGCGATGGCGACGAGGGGAGGAGGCGGCGGAGGAGGAGGGAAGGAGGCGAAGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCGGCCAAGGGCGGAGGCCCGCGGGCGCCGCCCCGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCCTCGCATCGCTTCAGCGGCGGAGGAGGCGGCGGCGGAGTAGGAGGCAGCCCCGCGCACTCGACGTCGGCGGCGAGCCAGAGCCAGAGCCAGAGCCAGGTTTATGGACGTGACAGTTCTCTGTTCCAGCCGTTCAATGTGCCTTCCAATCGACCTGGCCATTCTACTGAAAAGATCAATTCAGATAAGATCAACAAGAAGATTAGTGGTTCAAGAAAAGAACTGGGGATGTTATCCTCTCAGACTAAGGGCATGGATATTTATGCTTCAAGATCAACTGCTGAGGCACCACAAAGAAGAGCAGAAAATACAATAAAGAGTTCTTCGGGAAAGAGATTGGCCGATGATGATGAATTTATGGTTCCTTCTGTCTTCAATTCCAGATTTCCTCAATATAGTACTCAAGAGAATGCAGGGGTTCAAGACCAATCAACACCCCTTGTTGCTGCAAATCCACACAAAAGCCCTTCAACAGTGTCCAAATCATCCACAAAGTGTTATAACACTGTTAGCAAGAAATTGGAGAGAATCCATGTTTCTGATGTGAAATCAAAGACCCCTTTGAAAGACAAGGAG]

[+] EMBL CB635675             [TCCCGTAGCTTCCATTTCCATGGCCACAAAAACCGGCGACCTCCTCCACCCCGCCATGGCCTGACGCCCCCGAGAAGCTGCTGCGGCGGGAGGCGATGGCGACGAGGGGAGGAGGCGGCGGAGGAGGAGGGAAGGAGGCGAAGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCGGCCAAGGGCGGAGGCCCGCGGGCGCCGCCCCGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCCTCGCATCGCTTCAGCGGCGGAGGAGGCGGCGGCGGAGTAGGAGGCAGCCCCGCGCACTCGACGTCGGCGGCGAGCCAGAGCCAGAGCCAGAGCCAGGTTTATGGACGTGACAGTTCTCTGTTCCAGCCGTTCAATGTGCCTTCCAATCGACCTGGCCATTCTACTGAAAAGATCAATTCAGATAAGATCAACAAGAAGATTAGTGGTTCAAGAAAAGAACTGGGGATGTTATCCTCTCAGACTAAGGGCATGGATATTTATGCTTCAAGATCAACTGCTGAGGCACCACAAAGAAGAGCAGAAAATACAATAAAGAGTTCTTCGGGAAAGAGATTGGCCGATGATGATGAATTTATGGTTCCTTCTGTCTTCAATTCCAGATTTCCTCAATATAGTACTCAAGAGAATGCAGGGGTTCAAGACCAATCAACACCCCTTGTTGCTGCAAATCCACACAAAAGCCCTTCAACAGTGTCCAAATCATCCACAAAGTGTTATAACACTGTTAGCAAGAAATTGGAGAGAATCCATGTTTCTGATGTGAAATCAAAGACCCCTTTGAAAGACAAGGAG]


>consensus_10967#1 TCCCGTAGCTTCCATTTCCATGGCCACAAAAACCGGCGACCTCCTCCACCCCGCCATGGC CTGACGCCCCCGAGAAGCTGCTGCGGCGGGAGGCGATGGCGACGAGGGGAGGAGGCGGCG GAGGAGGAGGGAAGGAGGCGAAGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACG TCAACGACGCGGCCAAGGGCGGAGGCCCGCGGGCGCCGCCCCGGAACAAGATGGCGCTCT ACGAGCAGTTCACCGTGCCCTCGCATCGCTTCAGCGGCGGAGGAGGCGGCGGCGGAGTAG GAGGCAGCCCCGCGCACTCGACGTCGGCGGCGAGCCAGAGCCAGAGCCAGAGCCAGGTTT ATGGACGTGACAGTTCTCTGTTCCAGCCGTTCAATGTGCCTTCCAATCGACCTGGCCATT CTACTGAAAAGATCAATTCAGATAAGATCAACAAGAAGATTAGTGGTTCAAGAAAAGAAC TGGGGATGTTATCCTCTCAGACTAAGGGCATGGATATTTATGCTTCAAGATCAACTGCTG AGGCACCACAAAGAAGAGCAGAAAATACAATAAAGAGTTCTTCGGGAAAGAGATTGGCCG ATGATGATGAATTTATGGTTCCTTCTGTCTTCAATTCCAGATTTCCTCAATATAGTACTC AAGAGAATGCAGGGGTTCAAGACCAATCAACACCCCTTGTTGCTGCAAATCCACACAAAA GCCCTTCAACAGTGTCCAAATCATCCACAAAGTGTTATAACACTGTTAGCAAGAAATTGG AGAGAATCCATGTTTCTGATGTGAAATCAAAGACCCCTTTGAAAGACAAGGAG



consensusID : consensus_10967#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [CAAACATGCTATAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGAGCATCAAGCGACAAGTAGAAACGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAATCAACAGAGGGTTTTTGCTGCCCAAGTTTTTGAGCTGCATAAGTTGGTAAAAGTGCAGAAGTTGATTGCAGCATCGCCACATGTACTTATTGAAGGTGATCCTTGCCTTGGCAATGCCTTGTTAGCTAGCAAGAAAAAAATGGCGGAAGAGAACTTGAAAGCTCAGCCTGTGTTAGTTGCAACCAATGATGATGTGCAGCCAAGTCTACAGGAACCAGAATTATCGAAAGAAAATTCTGAAGAGAACCCACCCTCTCCTCGTGATACTGCACCTGTCAGTGGTCATCATGGATCAAAC]

[+] EMBL CB653195             [CAAACATGCTATAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGAGCATCAAGCGACAAGTAGAAACGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAATCAACAGAGGGTTTTTGCTGCCCAAGTTTTTGAGCTGCATAAGTTGGTAAAAGTGCAGAAGTTGATTGCAGCATCGCCACATGTACTTATTGAAGGTGATCCTTGCCTTGGCAATGCCTTGTTAGCTAGCAAGAAAAAAATGGCGGAAGAGAACTTGAAAGCTCAGCCTGTGTTAGTTGCAACCAATGATGATGTGCAGCCAAGTCTACAGGAACCAGAATTATCGAAAGAAAATTCTGAAGAGAACCCACCCTCTCCTCGTGATACTGCACCTGTCAGTGGTCATCATGGATCAAAC]


>consensus_10967#2 CAAACATGCTATAGTATGTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTT GGAAAACAGCGAGCATCAAGCGACAAGTAGAAACGGGAGTTCCGTGAAATTTCAGAACCC TCCAGTGAGAAGAAATACAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGG GCATTGTAATTTACCTCAAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGA AGCACAGGATAATGCAGAGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAAC TGCTTGGGAGATTTCTCCAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAA AGCAAGGCGGGCTATCATAAATCAACAGAGGGTTTTTGCTGCCCAAGTTTTTGAGCTGCA TAAGTTGGTAAAAGTGCAGAAGTTGATTGCAGCATCGCCACATGTACTTATTGAAGGTGA TCCTTGCCTTGGCAATGCCTTGTTAGCTAGCAAGAAAAAAATGGCGGAAGAGAACTTGAA AGCTCAGCCTGTGTTAGTTGCAACCAATGATGATGTGCAGCCAAGTCTACAGGAACCAGA ATTATCGAAAGAAAATTCTGAAGAGAACCCACCCTCTCCTCGTGATACTGCACCTGTCAG TGGTCATCATGGATCAAAC



consensusID : consensus_10967#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 206
fasta sequence
                              [CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGTGGATACTTTTGTTTCTCAAATTC]

[+] EMBL CB638261             [CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAAGGTGGATACTTTTGTTTCTCAAATTC]
[+] EMBL CB636610             [CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAG                                 ]
[+] EMBL CB640824             [CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAACCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGG                                             ]


>consensus_10967#3 CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCCTGACCTGACCTCCCCCACAA CCTGCGGCCTACGAATCGATCGGGAGAGGGGGTTCTCCTTCCTTTCCTCGACCTGCTGCT GGTGGGTTGGTGGTTTCTGCGGGGGGAGGCGGCGATGAGGGGAGGAGGAGGAGGAGGGAA GGTGGATACTTTTGTTTCTCAAATTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10967#0      AACTATCTCCCCCCCTTTCTCCTCCTCCGTAGCTTCCTTCGCCTTCCATTCCATGGCCAC 60
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------TCCCGTAGCTTC 12
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      CACAGACACCGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCC--TGACCTGAC 118
consensus_10967#3      ---------CGCCCCCCGCCTCGCGCTCCTCCTCCGCCCCGCCATGGCC--TGACCTGAC 49
consensus_10967#1      CATTTCCATGGCCACAAAAACCGGCGACCTCCTCCACCCCGCCATGGCC--TGACGCCCC 70
consensus_10967#2      ------------CAAACATGCTATAGTATGTCCTAAGACAGGCACTATAAATGATTTGGA 48
                                   *                  *      * * **       ***      

consensus_10967#0      CT-----CCCCCACAACCTGCGGC-----CTACGAATCGATCGGGAGAGGGGGTTCTCCT 168
consensus_10967#3      CT-----CCCCCACAACCTGCGGC-----CTACGAATCGATCGGGAGAGGGGGTTCTCCT 99
consensus_10967#1      CGAGAAGCTGCTGCGGCGGGAGGCGATGGCGACGAGGGGAGGAGGCGGCGGAGGAGGAGG 130
consensus_10967#2      TGAG--CCACATTTGGAAAACAGCGAGCATCAAGCGACAAGTAGAAACGGGAGTTCCGTG 106
                              *              **       * *     *   *     ** *       

consensus_10967#0      TCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGG---------GGGGAGGC 219
consensus_10967#3      TCCTTTCCTCGACCTGCTGCTGGTGGGTTGGTGGTTTCTGCGG---------GGGGAGGC 150
consensus_10967#1      GAAGGAGGCGAAGGGGAAGGTGATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGC 190
consensus_10967#2      AAATTTCAGAACCCTCCAGTGAGAAGAAATACAATATCCGCTA-------------AACC 153
                                         *      *        *  * **               *  *

consensus_10967#0      GGCGATGAGGGGAGG-----AGGAGGAGGAGGGAAGGAGG-TGGAGGAGAGGGGGAAGGT 273
consensus_10967#3      GGCGATGAGGGGAGG-----AGGAGGAGGAGGGAAGGTGGATACTTTTGTTTCTCAAATT 205
consensus_10967#1      GGCCAAGGGCGGAGGCCCGCGGGCGCCGCCCCGGAACAAGATGGCGCTCTACGAGCAGTT 250
consensus_10967#2      ATCTCCTGGTATTGA-----AAATACCAATGGGCATTGTAAT--TTACCTCAAGGAGGCT 206
                         *     *    *                  * *      *                 *

consensus_10967#0      GATGGGCCCGCTGTTCCCGCGGCTCCACGTCAACGACGCCGCCAAGGGCGGCGGCCCGCG 333
consensus_10967#3      C----------------------------------------------------------- 206
consensus_10967#1      CACCGTGCCCTCGCATCGCTTCAGCGGCGGAGGAGGCGGCGGCGGAGTAGGAGGCAGCCC 310
consensus_10967#2      TAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAGAGAAAATT- 265
                                                                                   

consensus_10967#0      GGCGCCGCCCAGGAACAAGATGGCGCTCTACGAGCAGTTCACCGTGCCGTCCCACCGCTT 393
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      CGCGCACTCGACGTCGGCGGCGAGCCAGAGCCAGAGCCAGAGCCAGGTTTATGGACGTGA 370
consensus_10967#2      -GATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTCCAGATGA 324
                                                                                   

consensus_10967#0      CAGCGGCGGAGGCGGCGCGCTCGCCTCGGCTCGGGG---CAGCCTGGCGCGCTCGAC-GT 449
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      CAGTTCTCTGTTCCAGCCGTTCAATGTGCCTTCCAA---TCGACCTGGCCATTCTAC-TG 426
consensus_10967#2      -AATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCATAAATC 383
                                                                                   

consensus_10967#0      CGGCGGCGAGCCAGAGCCAGGTATATGGATGTGACATGCCTCTTTTTGAGCCGTTCAATG 509
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      AAAAGATCAATTCAGATAAGATCAACAAGAAGATTAGTGGTTCAAGAAAAGAACTGGGGA 486
consensus_10967#2      AACAGAGGGTTTTTGCTGCCCAAGTTTTTGAGCTGCATAAGTTGGTAAAAGTGCAGAAGT 443
                                                                                   

consensus_10967#0      TGCCTTCCAATGGACCTGGCCAGTCTGTTGAAAAGATGAATTCAAATTCTGTCAACAGAC 569
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      TGTTATCCTCTCAGACTAAGGGCATGGATATTTATGCTTCAAGATCAACTGCTGAGGCAC 546
consensus_10967#2      TGATTGCAGCATCGCCACATGTACTTATTGAAGGTGATCCTTGCCTTGGCAATGCCTTGT 503
                                                                                   

consensus_10967#0      AGATTAATGGTTCAAGAAAAGATTCGGGGATGTTATCCACTCAG---CCTAAGGGCATTG 626
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      CACAAAGAAGAGCAGAAAATACAATAAAGAGTTCTTCGGGAAAG---AGATTGGCCGATG 603
consensus_10967#2      TAGCTAGCAAGAAAAAAATGGCGGAAGAGAACTTGAAAGCTCAGCCTGTGTTAGTTGCAA 563
                                                                                   

consensus_10967#0      ATAAATATGGTTCAGGATCAAGGGCTGAGTGTGCCCCACAGCAAAGGGTGGAAAAGGGCA 686
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ATGATGAATTTATGGTTCCTTCTGTCTTCAATTCCAGATTTCCTCAATATAGTACTCAAG 663
consensus_10967#2      CCAATGATGATGTGCAGCCAAGTCTACAGGAACCAGAATTATCGAAAGAAAATTCTGAAG 623
                                                                                   

consensus_10967#0      TAAAGAGTTCTTCGGGAAGGAAATTGGCTGATGATGATGAATTCATTGTACCTTCTGTTT 746
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      AGAATGCAGGGGTTCAAGACCAATCAACACCCCTTGTTGCTGCAAATCCACACAAAAGCC 723
consensus_10967#2      AGAACCCACCCTCTCCTCGTGATACTGCACCTGTCAGTGGTCATCATGGATCAAAC---- 679
                                                                                   

consensus_10967#0      TCAGTGCCAGATTTCCTCAATATTCTACTAAAGAGCGTGCGGGGGTTCAAGAGGAATCAA 806
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      CTTCAACAGTGTCCAAATCATCCACAAAGTGTTATAACACTGTTAGCAAGAAATTGGAGA 783
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      CACCCCTTGTTGCTCTCAGTCCGCACAAAAGCCCTCCAGCAGTGTCCAAATCACCGACAA 866
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      GAATCCATGTTTCTGATGTGAAATCAAAGACCCCTTTGAAAGACAAGGAG---------- 833
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AGTGTTATAACACTGTTAGTAAGAACTTGGAGAGAATCAATGTTTCTGATGTGAAATCAA 926
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      GGGGTTCTCAGAAAGACAAGGAGACAGGACCAGCACAAACATTGAAAAATGTGGAAGTTG 986
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AACATTTTTCATCATTTGAGGCATCCAAAGATATGTTTGGAAGCAAACATGCTAAAGTAT 1046
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      GTCCTAAGACAGGCACTATAAATGATTTGGATGAGCCACATTTGGAAAACAGCGGGCATC 1106
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AAGCGACAAGTAGAAGCGGGAGTTCCGTGAAATTTCAGAACCCTCCAGTGAGAAGAAATA 1166
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      CAATATCCGCTAAACCATCTCCTGGTATTGAAAATACCAATGGGCATTGTAATTTACCTC 1226
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AAGGAGGCTTAAAGGAAGCTGGTACAAAGAGAAAAAGGTTGGAAGCACAGGATAATGCAG 1286
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AGAAAATTGATGATTTGTCTGATTCCTCAGTGGAGTGTATAACTGCTTGGGAGATTTCTC 1346
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      CAGATGAAATTGTTGGTGCCATTGGTGCAAAGCATTTTTGGAAAGCAAGGCGGGCTATCA 1406
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      TAAAGTAAGTGTACTACACTAGAATAATTTGATTGTATTAAGTATATCATTGATGAAAGC 1466
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AAAATATAATGATATACTGATTCTTCTATAGTAAGTATAGGGCTGCAAGAATAGCTGTAG 1526
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      GCTACTAGGCTCATGAGCTGCTCAATCAACTTGCTTTTTACCTCAACTCAAGATCAACTA 1586
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      AAATACAAATGAGATGAGTTTGGGTGTATTTTGTAGTTTGACTGTAAAAGATGAGTGTGA 1646
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      GTCGAGGTCATATCTTTCTAGCCTTGTTTCTGCAAACATGTAGATTTCAGATAACTAACT 1706
consensus_10967#3      ------------------------------------------------------------
consensus_10967#1      ------------------------------------------------------------
consensus_10967#2      ------------------------------------------------------------
                                                                                   

consensus_10967#0      T 1707
consensus_10967#3      -
consensus_10967#1      -
consensus_10967#2      -
                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)